Discovery and genetic characterization of novel caliciviruses in German and Dutch poultry

Archives of Virology

Volumn 157, Issue 8, 2012, Pages 1499-1507

  Wolf, Sandro ^a   Reetz, Jochen ^b   Hoffmann, Kathrin ^c   Gründel, Anne ^a   Schwarz, Bernd Andreas ^d   Hänel, Ingrid ^e   Otto, Peter H ^e  

^a DRESDEN UNIVERSITY OF TECHNOLOGY   (Germany)

^b Institute of Risk Assessment   (Germany)

^c Landesuntersuchungsanstalt für das Gesundheits und Veterinärwesen Sachsen   (Germany)

^d Landesuntersuchungsanstalt für das Gesundheits und Veterinärwesen Sachsen   (Germany)

^e FEDERAL RESEARCH INSTITUTE FOR ANIMAL HEALTH   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

DNA DIRECTED RNA POLYMERASE; PEPTIDE HYDROLASE; VIRUS PROTEIN; VIRUS RNA;

AMINO ACID SEQUENCE; ANIMAL; ANIMAL DISEASE; ARTICLE; BIRD DISEASE; CALICIVIRUS; CALICIVIRUS INFECTION; CHICKEN; CLASSIFICATION; DNA SEQUENCE; GENETICS; GERMANY; ISOLATION AND PURIFICATION; MOLECULAR GENETICS; NETHERLANDS; NUCLEOTIDE SEQUENCE; PHYLOGENY; POULTRY; SEQUENCE ALIGNMENT; TURKEY (BIRD); VIROLOGY;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; CALICIVIRIDAE; CALICIVIRIDAE INFECTIONS; CHICKENS; DNA-DIRECTED RNA POLYMERASES; GERMANY; MOLECULAR SEQUENCE DATA; NETHERLANDS; PEPTIDE HYDROLASES; PHYLOGENY; POULTRY; POULTRY DISEASES; RNA, VIRAL; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; TURKEYS; VIRAL STRUCTURAL PROTEINS;

AVES; GALLUS GALLUS; MELEAGRIS GALLOPAVO; MIRIDAE;

EID: 84864448130     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-012-1326-7     Document Type: Article

References (18)

1. Carstens EB (2010) Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses (2009). Arch Virol 155: 133-146.
2. Chan MC, Sung JJ, Lam RK, Chan PK, Lai RW, Leung WK (2006) Sapovirus detection by quantitative real-time RT-PCR in clinical stool specimens. J Virol Methods 134: 146-153.
3. Cubitt WD, Barrett AD (1985) Propagation and preliminary characterization of a chicken candidate calicivirus. J Gen Virol 66(Pt 7): 1431-1438.
4. Day JM, Ballard L, Duke M, Scheffler B, Zsak L (2010) Metagenomic analysis of the turkey gut RNA virus community. Virol J 7: 313.
5. Farkas T, Sestak K, Wei C, Jiang X (2008) Characterization of a rhesus monkey calicivirus representing a new genus of Caliciviridae. J Virol 82: 5408-5416.
6. Green KY, Ando T, Balayan MS, Berke T, Clarke IN, Estes MK, Matson DO, Nakata S, Neill JD, Studdert MJ, Thiel HJ (2000) Taxonomy of the caliciviruses. J Infect Dis 181(Suppl 2): S322-S330.
7. Guo M, Chang KO, Hardy ME, Zhang Q, Parwani AV, Saif LJ (1999) Molecular characterization of a porcine enteric calicivirus genetically related to Sapporo-like human caliciviruses. J Virol 73: 9625-9631.
8. Hoehne M, Schreier E (2006) Detection of Norovirus genogroup I and II by multiplex real-time RT- PCR using a 3'-minor groove binder-DNA probe. BMC Infect Dis 6: 69.
9. Kubista M, Andrade JM, Bengtsson M, Forootan A, Jonak J, Lind K, Sindelka R, Sjoback R, Sjogreen B, Strombom L, Stahlberg A, Zoric N (2006) The real-time polymerase chain reaction. Mol Asp Med 27: 95-125.
10. L'Homme Y, Sansregret R, Plante-Fortier E, Lamontagne AM, Ouardani M, Lacroix G, Simard C (2009) Genomic characterization of swine caliciviruses representing a new genus of Caliciviridae. Virus Genes 39: 66-75.
11. Meyers G, Wirblich C, Thiel HJ, Thumfart JO (2000) Rabbit hemorrhagic disease virus: genome organization and polyprotein processing of a calicivirus studied after transient expression of cDNA constructs. Virology 276: 349-363.
12. Morrow CJ, Samu G, Matrai E, Klausz A, Wood AM, Richter S, Jaskulska B, Hess M (2008) Avian hepatitis E virus infection and possible associated clinical disease in broiler breeder flocks in Hungary. Avian Pathol 37: 527-535.
13. Scipioni A, Mauroy A, Vinje J, Thiry E (2008) Animal noroviruses. Vet J 178: 32-45.
14. Strive T, Wright JD, Robinson AJ (2009) Identification and partial characterisation of a new Lagovirus in Australian wild rabbits. Virology 384: 97-105.
15. Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4. 0. Mol Biol Evol 24: 1596-1599.
16. Wang QH, Han MG, Cheetham S, Souza M, Funk JA, Saif LJ (2005) Porcine noroviruses related to human noroviruses. Emerg Infect Dis 11: 1874-1881.
17. Wolf S, Williamson W, Hewitt J, Lin S, Rivera-Aban M, Ball A, Scholes P, Savill M, Greening GE (2009) Molecular detection of norovirus in sheep and pigs in New Zealand farms. Vet Microbiol 133: 184-189.
18. Wolf S, Reetz J, Otto P (2011) Genetic characterization of a novel calicivirus from a chicken. Arch Virol 156: 1143-1150.