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Volumn 279, Issue 16, 2012, Pages 2837-2847

Sustained glycolytic oscillations in individual isolated yeast cells

Author keywords

cell heterogeneity; glycolysis; limit cycle oscillation; mathematical model; microfluidic chamber

Indexed keywords

ARTICLE; BIOMASS; CELL CULTURE; CELL HETEROGENEITY; CELL ISOLATION; CELL METABOLISM; CELL POPULATION; CELL SYNCHRONIZATION; CELLULAR PARAMETERS; GLYCOLYSIS; KINETICS; MICROFLUIDICS; NONHUMAN; OSCILLATION; PRIORITY JOURNAL; SACCHAROMYCES CEREVISIAE; SIMULATION; YEAST CELL;

EID: 84864416480     PISSN: 1742464X     EISSN: 17424658     Source Type: Journal    
DOI: 10.1111/j.1742-4658.2012.08639.x     Document Type: Article
Times cited : (69)

References (38)
  • 1
    • 0141783646 scopus 로고    scopus 로고
    • The rhythm of yeast
    • DOI 10.1016/S0168-6445(03)00065-2
    • Richard P, (2003) The rhythm of yeast. FEMS Microbiol Rev 27, 547-557. (Pubitemid 37205169)
    • (2003) FEMS Microbiology Reviews , vol.27 , Issue.4 , pp. 547-557
    • Richard, P.1
  • 2
    • 20444459104 scopus 로고    scopus 로고
    • On the mechanisms of glycolytic oscillations in yeast
    • DOI 10.1111/j.1742-4658.2005.04639.x
    • Madsen MF, Danø S, &, Sørensen PG, (2005) On the mechanisms of glycolytic oscillations in yeast. FEBS J 272, 2648-2660. (Pubitemid 40825413)
    • (2005) FEBS Journal , vol.272 , Issue.11 , pp. 2648-2660
    • Madsen, M.F.1    Dano, S.2    Sorensen, P.G.3
  • 3
    • 0033581959 scopus 로고    scopus 로고
    • Sustained oscillations in living cells
    • Danø S, Sørensen P, &, Hynne F, (1999) Sustained oscillations in living cells. Nature 402, 320-322. (Pubitemid 129516271)
    • (1999) Nature , vol.402 , Issue.6759 , pp. 320-322
    • Dano, S.1    Sorensen, P.G.2    Hynne, F.3
  • 4
    • 0015084446 scopus 로고
    • Metabolic coupling and synchronization of NADH oscillations in yeast cell populations
    • Ghosh A, Chance B, &, Pye E, (1971) Metabolic coupling and synchronization of NADH oscillations in yeast cell populations. Arch Biochem Biophys 145, 319-331.
    • (1971) Arch Biochem Biophys , vol.145 , pp. 319-331
    • Ghosh, A.1    Chance, B.2    Pye, E.3
  • 5
    • 0030025877 scopus 로고    scopus 로고
    • Acetaldehyde mediates the synchronization of sustained glycolytic oscillations in populations of yeast cells
    • Richard P, Bakker B, Teusink B, van Dam K, &, Westerhoff H, (1996) Acetaldehyde mediates the synchronization of sustained glycolytic oscillations in populations of yeast cells. Eur J Biochem 235, 238-241. (Pubitemid 26048625)
    • (1996) European Journal of Biochemistry , vol.235 , Issue.1-2 , pp. 238-241
    • Richard, P.1    Bakker, B.M.2    Teusink, B.3    Van Dam, K.4    Westerhoff, H.V.5
  • 6
    • 0028345016 scopus 로고
    • Yeast cells with a specific cellular make-up and an environment that removes acetaldehyde are prone to sustained glycolytic oscillations
    • DOI 10.1016/0014-5793(94)80461-3
    • Richard P, Diderich J, Bakker B, Teusink B, van Dam K, &, Westerhoff HV, (1994) Yeast cells with a specific cellular make-up and an environment that removes acetaldehyde are prone to sustained glycolytic oscillations. FEBS Lett 341, 223-226. (Pubitemid 24102686)
    • (1994) FEBS Letters , vol.341 , Issue.2-3 , pp. 223-226
    • Richard, P.1
  • 8
    • 0026666852 scopus 로고
    • Synchrony and mutual stimulation of yeast cells during fast glycolytic oscillations
    • Aon M, Cortassa S, Westerhoff H, &, van Dam K, (1992) Synchrony and mutual stimulation of yeast cells during fast glycolytic oscillations. J Gen Microbiol 138, 2219-2227.
    • (1992) J Gen Microbiol , vol.138 , pp. 2219-2227
    • Aon, M.1    Cortassa, S.2    Westerhoff, H.3    Van Dam, K.4
  • 9
    • 33846289966 scopus 로고    scopus 로고
    • Single cell studies and simulation of cell-cell interactions using oscillating glycolysis in yeast cells
    • DOI 10.1016/j.bpc.2006.08.009, PII S030146220600264X
    • Poulsen A, Petersen M, &, Olsen L, (2007) Single cell studies and simulation of cell-cell interactions using oscillating glycolysis in yeast cells. Biophys Chem 125, 275-280. (Pubitemid 46123763)
    • (2007) Biophysical Chemistry , vol.125 , Issue.2-3 , pp. 275-280
    • Poulsen, A.K.1    Petersen, M.O.2    Olsen, L.F.3
  • 11
    • 4544344218 scopus 로고    scopus 로고
    • Web-based kinetic modelling using JWS Online
    • DOI 10.1093/bioinformatics/bth200
    • Olivier B, &, Snoep J, (2004) Web-based kinetic modelling using JWS Online. Bioinformatics 20, 2143-2144. (Pubitemid 39236569)
    • (2004) Bioinformatics , vol.20 , Issue.13 , pp. 2143-2144
    • Olivier, B.G.1    Snoep, J.L.2
  • 13
    • 0035846723 scopus 로고    scopus 로고
    • Full-scale model of glycolysis in Saccharomyces cerevisiae
    • DOI 10.1016/S0301-4622(01)00229-0, PII S0301462201002290
    • Hynne F, Danø S, &, Sørensen P, (2001) Full-scale model of glycolysis in Saccharomyces cerevisiae. Biophys Chem 94, 121-163. (Pubitemid 34015989)
    • (2001) Biophysical Chemistry , vol.94 , Issue.1-2 , pp. 121-163
    • Hynne, F.1    Dano, S.2    Sorensen, P.G.3
  • 14
    • 84864411487 scopus 로고    scopus 로고
    • From steady-state to synchronized yeast glycolytic oscillations I: Model construction
    • in press
    • du Preez F, van Niekerk D, Kooi B, Rohwer J, &, Snoep J, (2012) From steady-state to synchronized yeast glycolytic oscillations I: model construction. FEBS J in press.
    • (2012) FEBS J
    • Du Preez, F.1    Van Niekerk, D.2    Kooi, B.3    Rohwer, J.4    Snoep, J.5
  • 15
    • 84864411487 scopus 로고    scopus 로고
    • From steady-state to synchronized yeast glycolytic oscillations II: Model validation
    • in press
    • du Preez F, van Niekerk D, &, Snoep J, (2012) From steady-state to synchronized yeast glycolytic oscillations II: model validation. FEBS J in press.
    • (2012) FEBS J
    • Du Preez, F.1    Van Niekerk, D.2    Snoep, J.3
  • 16
    • 0034092437 scopus 로고    scopus 로고
    • How yeast cells synchronize their glycolytic oscillations: A perturbation analytic treatment
    • Bier M, Bakker B, &, Westerhoff H, (2000) How yeast cells synchronize their glycolytic oscillations: a perturbation analytic treatment. Biophys J 78, 1087-1093. (Pubitemid 30141538)
    • (2000) Biophysical Journal , vol.78 , Issue.3 , pp. 1087-1093
    • Bier, M.1    Bakker, B.M.2    Westerhoff, H.V.3
  • 17
    • 0030857292 scopus 로고    scopus 로고
    • Dynamics of two-component biochemical systems in interacting cells; Synchronization and desynchronization of oscillations and multiple steady states
    • DOI 10.1016/S0303-2647(97)01688-2, PII S0303264797016882
    • Wolf J, &, Heinrich R, (1997) Dynamics of two-component biochemical systems in interacting cells; synchronization and desynchronization of oscillations and multiple steady states. BioSystems 43, 1-24. (Pubitemid 27353008)
    • (1997) BioSystems , vol.43 , Issue.1 , pp. 1-24
    • Wolf, J.1    Heinrich, R.2
  • 18
    • 79960105112 scopus 로고    scopus 로고
    • Glycolytic oscillations and limits on glycolytic oscillations and limits on robust efficiency
    • Chandra F, Buzi G, &, Doyle J, (2011) Glycolytic oscillations and limits on glycolytic oscillations and limits on robust efficiency. Science 333, 187-192.
    • (2011) Science , vol.333 , pp. 187-192
    • Chandra, F.1    Buzi, G.2    Doyle, J.3
  • 19
    • 0028985536 scopus 로고
    • Trehalose synthase: Guard to the gate of glycolysis in yeast?
    • Thevelein JM, &, Hohmann S, (1995) Trehalose synthase: guard to the gate of glycolysis in yeast? Trends Biochem Sci 20, 3-9.
    • (1995) Trends Biochem Sci , vol.20 , pp. 3-9
    • Thevelein, J.M.1    Hohmann, S.2
  • 20
    • 0027446595 scopus 로고
    • Around the growth phase transition S. cerevisiae's make-up favours sustained oscillations of intracellular metabolites
    • DOI 10.1016/0014-5793(93)81332-T
    • Richard P, Teusink B, Westerhoff HV, &, van Dam K, (1993) Around the growth phase transition S. cerevisiae's make-up favours sustained oscillations of intracellular metabolites. FEBS Lett 318, 80-82. (Pubitemid 23057041)
    • (1993) FEBS Letters , vol.318 , Issue.1 , pp. 80-82
    • Richard, P.1    Teusink, B.2    Westerhoff, H.V.3    Van Dam, K.4
  • 22
    • 34547738108 scopus 로고    scopus 로고
    • Effect of nutrient starvation on the cellular composition and metabolic capacity of Saccharomyces cerevisiae
    • DOI 10.1128/AEM.00425-07
    • Albers E, Larsson C, Andlid T, Walsh MC, &, Gustafsson L, (2007) Effect of nutrient starvation on the cellular composition and metabolic capacity of Saccharomyces cerevisiae. Appl Environ Microbiol 73, 4839-4848. (Pubitemid 47241074)
    • (2007) Applied and Environmental Microbiology , vol.73 , Issue.15 , pp. 4839-4848
    • Albers, E.1    Larsson, C.2    Andlid, T.3    Walsh, M.C.4    Gustafsson, L.5
  • 25
    • 84860264537 scopus 로고    scopus 로고
    • Acquisition of single cell data in an optical microscope
    • (Herold K.E. & Rasooly A. eds), Caister Academic Press, Norfolk, UK
    • Sott K, Eriksson E, &, Goksör M, (2009) Acquisition of single cell data in an optical microscope. In Lab on a Chip Technology: Biomolecular Separation and Analysis (, Herold KE, &, Rasooly A, eds), pp. 151-166. Caister Academic Press, Norfolk, UK.
    • (2009) Lab on A Chip Technology: Biomolecular Separation and Analysis , pp. 151-166
    • Sott, K.1    Eriksson, E.2    Goksör, M.3
  • 26
    • 76949085845 scopus 로고    scopus 로고
    • A microfluidic device for reversible environmental changes around single cells using optical tweezers for cell selection and positioning
    • Eriksson E, Sott K, Lundqvist F, Sveningsson M, Scrimgeour J, Hanstorp D, Goksör M, &, Granéli A, (2010) A microfluidic device for reversible environmental changes around single cells using optical tweezers for cell selection and positioning. Lab Chip 10, 617-625.
    • (2010) Lab Chip , vol.10 , pp. 617-625
    • Eriksson, E.1    Sott, K.2    Lundqvist, F.3    Sveningsson, M.4    Scrimgeour, J.5    Hanstorp, D.6    Goksör, M.7    Granéli, A.8
  • 29
    • 0023306185 scopus 로고
    • Optical trapping and manipulation of viruses and bacteria
    • Ashkin A, &, Dziedzic JM, (1987) Optical trapping and manipulation of viruses and bacteria. Science 235, 1517-1520. (Pubitemid 17038091)
    • (1987) Science , vol.235 , Issue.4795 , pp. 1517-1520
    • Ashkin, A.1    Dziedzic, J.M.2
  • 30
    • 0022655537 scopus 로고
    • Observation of a single-beam gradient force optical trap for dielectric particles
    • Ashkin A, Dziedzic JM, Bjorkholm JE, &, Chu S, (1986) Observation of a single-beam gradient force optical trap for dielectric particles. Opt Lett 11, 288.
    • (1986) Opt Lett , vol.11 , pp. 288
    • Ashkin, A.1    Dziedzic, J.M.2    Bjorkholm, J.E.3    Chu, S.4
  • 31
    • 0023663919 scopus 로고
    • Optical trapping and manipulation of single cells using infrared laser beams
    • Ashkin A, Dziedzic JM, &, Yamane T, (1987) Optical trapping and manipulation of single cells using infrared laser beams. Nature 330, 769-771.
    • (1987) Nature , vol.330 , pp. 769-771
    • Ashkin, A.1    Dziedzic, J.M.2    Yamane, T.3
  • 32
    • 0031120575 scopus 로고    scopus 로고
    • Design for fully steerable dual-trap optical tweezers
    • Fällman E, &, Axner O, (1997) Design for fully steerable dual-trap optical tweezers. Appl Opt 36, 2107-2113. (Pubitemid 127625394)
    • (1997) Applied Optics , vol.36 , Issue.10 , pp. 2107-2113
    • Fallman, E.1    Axner, O.2
  • 33
    • 0015604413 scopus 로고
    • Optical constants of water in the 200-nm to 200-μm wavelength region
    • Hale GM, &, Querry MR, (1973) Optical constants of water in the 200-nm to 200-μm wavelength region. Appl Opt 12, 555-563.
    • (1973) Appl Opt , vol.12 , pp. 555-563
    • Hale, G.M.1    Querry, M.R.2
  • 34
    • 0029826435 scopus 로고    scopus 로고
    • Effects of ultraviolet exposure and near infrared laser tweezers on human spermatozoa
    • König K, Tadir Y, Patrizio P, Berns MW, &, Tromberg BJ, (1996) Effects of ultraviolet exposure and near infrared laser tweezers on human spermatozoa. Hum Reprod 11, 2162-2164. (Pubitemid 26392007)
    • (1996) Human Reproduction , vol.11 , Issue.10 , pp. 2162-2164
    • Konig, K.1    Tadir, Y.2    Patrizio, P.3    Berns, M.W.4    Tromberg, B.J.5
  • 35
    • 0032707613 scopus 로고    scopus 로고
    • Characterization of photodamage to Escherichia coli in optical traps
    • Neuman KC, Chadd EH, Liou GF, Bergman K, &, Block SM, (1999) Characterization of photodamage to Escherichia coli in optical traps. Biophys J 77, 2856-2863. (Pubitemid 29519528)
    • (1999) Biophysical Journal , vol.77 , Issue.5 , pp. 2856-2863
    • Neuman, K.C.1    Chadd, E.H.2    Liou, G.F.3    Bergman, K.4    Block, S.M.5


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