The relevance of compartmentation for cysteine synthesis in phototrophic organisms

Protoplasma

Volumn 249, Issue SUPPL.2, 2012, Pages 147-155

  Birke, Hannah ^a   Müller, Stefanie J ^b   Rother, Michael ^c   Zimmer, Andreas D ^b   Hoernstein, Sebastian N W ^b   Wesenberg, Dirk ^c   Wirtz, Markus ^a   Krauss, Gerd Joachim ^c   Reski, Ralf ^b   Hell, Rüdiger ^a  

^a UNIVERSITY OF HEIDELBERG   (Germany)

^b UNIVERSITY OF FREIBURG   (Germany)

^c MARTIN LUTHER UNIVERSITY HALLE WITTENBERG   (Germany)

Author keywords

Acetylation; Cysteine synthesis; Moss; O acetylserine(thiol)lyase; Physcomitrella patens; Subcellular compartmentation

Indexed keywords

CYSTEINE; SULFUR; VEGETABLE PROTEIN;

BIOSYNTHESIS; CELL COMPARTMENTALIZATION; CELL FRACTIONATION; METABOLISM; PHOTOTROPHY; REVIEW;

CELL COMPARTMENTATION; CYSTEINE; PHOTOTROPHIC PROCESSES; PLANT PROTEINS; SUBCELLULAR FRACTIONS; SULFUR;

ARABIDOPSIS; ARABIDOPSIS THALIANA; BRYOPHYTA; CHLAMYDOMONAS REINHARDTII; CHLOROPHYTA; PHYSCOMITRELLA; PHYSCOMITRELLA PATENS; TRACHEOPHYTA;

EID: 84864373837     PISSN: 0033183X     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00709-012-0411-9     Document Type: Review

References (47)

1. Brunold C, Suter M (1982) Intracellular localization of serine acetyltransferase in spinach leaves. Planta 155: 321-327.
2. Cove D, Bezanilla M, Harries P, Quatrano R (2006) Mosses as model systems for the study of metabolism and development. Annu Rev Plant Biol 57: 497-520.
3. Droux M, Ruffet ML, Douce R, Job D (1998) Interactions between serine acetyltransferase and O-acetylserine (thiol) lyase in higher plants-structural and kinetic properties of the free and bound enzymes. Eur J Biochem 255: 235-245.
4. Francois JA, Kumaran S, Jez JM (2006) Structural basis for interaction of O-acetylserine sulfhydrylase and serine acetyltransferase in the Arabidopsis cysteine synthase complex. Plant Cell 18: 3647-3655.
5. Giordano M, Norici A, Ratti S (2008) Role of sulfur for algae: aquisition, metabolism, ecology and evolution. In: Hell R, Dahl C, Leustek T (eds) Sulfur metabolism in phototrophic organisms, vol 27, Advances in photosynthesis and respiration. Springer, Dordrecht, pp 397-415.
6. Haas FH, Heeg C, Queiroz R, Bauer A, Wirtz M, Hell R (2008) Mitochondrial serine acetyltransferase functions as a pacemaker of cysteine synthesis in plant cells. Plant Physiol 148: 1055-1067.
7. Heeg C, Kruse C, Jost R, Gutensohn M, Ruppert T, Wirtz M, Hell R (2008) Analysis of the Arabidopsis O-acetylserine(thiol)lyase gene family demonstrates compartment-specific differences in the regulation of cysteine synthesis. Plant Cell 20: 168-185.
8. Hell R, Wirtz M (2011) Molecular biology, biochemistry and cellular physiology of cysteine metabolism in Arabidopsis thaliana. Arabidopsis Book 9: e0154. doi: 10. 1199/tab. 0154.
9. Hesse H, Trachsel N, Suter M, Kopriva S, von Ballmoos P, Rennenberg H, Brunold C (2003) Effect of glucose on assimilatory sulphate reduction in Arabidopsis thaliana roots. J Exp Bot 54: 1701-1709.
10. Hohe A, Egener T, Lucht JM, Holtorf H, Reinhard C, Schween G, Reski R (2004) An improved and highly standardised transformation procedure allows efficient production of single and multiple targeted gene-knockouts in a moss, Physcomitrella patens. Curr Genet 44: 339-347.
11. Joshi CP, Zhou H, Huang X, Chiang VL (1997) Context sequences of translation initiation codons in plants. Plant Mol Biol 35: 993-1001.
12. Kawashima CG, Berkowitz O, Hell R, Noji M, Saito K (2005) Characterization and expression analysis of a serine acetyltransferase gene family involved in a key step of the sulfur assimilation pathway in Arabidopsis. Plant Physiol 137: 220-230.
13. Khan MS, Haas FH, Allboje Samami A, Moghaddas Gholami A, Bauer A, Fellenberg K, Reichelt M, Hansch R, Mendel RR, Meyer AJ, Wirtz M, Hell R (2010) Sulfite reductase defines a newly discovered bottleneck for assimilatory sulfate reduction and is essential for growth and development in Arabidopsis thaliana. Plant Cell 22: 1216-1231.
14. Kircher S, Kozma-Bognar L, Kim L, Adam E, Harter K, Schafer E, Nagy F (1999) Light quality-dependent nuclear import of the plant photoreceptors phytochrome A and B. Plant Cell 11: 1445-1456.
15. Kopriva S, Fritzemeier K, Wiedemann G, Reski R (2007) The putative moss 3′-phosphoadenosine-5′-phosphosulfate reductase is a novel form of adenosine-5′-phosphosulfate reductase without an iron-sulfur cluster. J Biol Chem 282: 22930-22938.
16. Kopriva S, Patron N, Keeling P, Leustek T (2008) Phylogenetic analysis of sulfate assimilation and cysteine biosynthesis in phototrophic organisms. In: Hell R, Dahl C, Leustek T (eds) Sulfur metabolism in phototrophic organisms, vol 27, Advances in photosynthesis and respiration. Springer, Dordrecht, pp 33-60.
17. Koprivova A, Suter M, den Camp RO, Brunold C, Kopriva S (2000) Regulation of sulfate assimilation by nitrogen in Arabidopsis. Plant Physiol 122: 737-746.
18. Koprivova A, North KA, Kopriva S (2008) Complex signaling network in regulation of adenosine 5′-phosphosulfate reductase by salt stress in Arabidopsis roots. Plant Physiol 146: 1408-1420.
19. Kozak M (1987) An analysis of 5′-noncoding sequences from 699 vertebrate messenger RNAs. Nucleic Acids Res 15: 8125-8148.
20. Krüger S, Niehl A, Martin MCL, Steinhauser D, Donath A, Hildebrandt T, Romero LC, Hoefgen R, Gotor C, Hesse H (2009) Analysis of cytosolic and plastidic serine acetyltransferase mutants and subcellular metabolite distributions suggests interplay of the cellular compartments for cysteine biosynthesis in Arabidopis. Plant Cell Environ 32: 349-367.
21. Lang D, Zimmer AD, Rensing SA, Reski R (2008) Exploring plant biodiversity: the Physcomitrella genome and beyond. Trends Plant Sci 13: 542-549.
22. Lang EG, Mueller SJ, Hoernstein SN, Porankiewicz-Asplund J, Vervliet-Scheebaum M, Reski R (2011) Simultaneous isolation of pure and intact chloroplasts and mitochondria from moss as the basis for sub-cellular proteomics. Plant Cell Rep 30: 205-215.
23. Linka N, Weber AP (2010) Intracellular metabolite transporters in plants. Mol Plant 3: 21-53.
24. Lunn JE, Droux M, Martin J, Douce R (1990) Localization of ATP-sulfurylase and O-acetylserine(thiol)lyase in spinach leaves. Plant Physiol 94: 1345-1352.
25. Meyer AJ, Rausch T (2008) Biosynthesis, compartmentation and cellular functions of glutathione in plant cells. In: Hell R, Dahl C, Knaff DB, Leustek T (eds) Sulfur metabolism in phototrophic organisms, vol 27, Advances in photosynthesis and respiration. Springer, Dordrecht, pp 161-184.
26. Patron NJ, Durnford DG, Kopriva S (2008) Sulfate assimilation in eukaryotes: fusions, relocations and lateral transfers. BMC Evol Biol 8: 39.
27. Polevoda B, Sherman F (2003) Composition and function of the eukaryotic N-terminal acetyltransferase subunits. Biochem Biophys Res Commun 308: 1-11.
28. Prigge MJ, Bezanilla M (2010) Evolutionary crossroads in developmental biology: Physcomitrella patens. Development 137: 3535-3543.
29. Rabilloud T (1999) Silver staining of 2-D electrophoresis gels. Methods Mol Biol 112: 297-305.
30. Reski R (1998) Development, genetics and molecular biology of mosses. Bot Acta 111: 1-15.
31. Rolland N, Droux M, Douce R (1992) Subcellular distribution of O-acetylserine(thiol)lyase in cauliflower (Brassica oleracea L.) inflorescence. Plant Physiol 98: 927-935.
32. Rother M, Krauss GJ, Grass G, Wesenberg D (2006) Sulphate assimilation under Cd stress in Physcomitrella patens-combined transcript, enzyme and metabolite profiling. Plant Cell Environ 29: 1801-1811.
33. Ruffet ML, Droux M, Douce R (1994) Purification and kinetic properties of serine acetyltransferase free of O-acetylserine(thiol)lyase from spinach chloroplasts. Plant Physiol 104: 597-604.
34. Ruffet ML, Lebrun M, Droux M, Douce R (1995) Subcellular distribution of serine acetyltransferase from Pisum sativum and characterization of an Arabidopsis thaliana putative cytosolic isoform. Eur J Biochem 227: 500-509.
35. Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425.
36. Shibagaki N, Grossman A (2008) The state of sulfur metabolism in algae: from ecology to genomics. In: Hell R, Dahl C, Leustek T (eds) Sulfur metabolism in phototrophic organisms, vol 27, Advances in photosynthesis and respiration. Springer, Dordrecht, pp 235-272.
37. Takahashi H, Kopriva S, Giordano M, Saito K, Hell R (2011) Sulfur assimilation in photosynthetic organisms: molecular functions and regulations of transporters and assimilatory enzymes. Annu Rev Plant Biol 62: 157-184.
38. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28: 2731-2739.
39. Vauclare P, Kopriva S, Fell D, Suter M, Sticher L, von Ballmoos P, Krahenbuhl U, den Camp RO, Brunold C (2002) Flux control of sulphate assimilation in Arabidopsis thaliana: adenosine 5′-phosphosulphate reductase is more susceptible than ATP sulphurylase to negative control by thiols. Plant J 31: 729-740.
40. Warrilow AG, Hawkesford MJ (2000) Cysteine synthase (O-acetylserine (thiol) lyase) substrate specificities classify the mitochondrial isoform as a cyanoalanine synthase. J Exp Bot 51: 985-993.
41. Watanabe M, Mochida K, Kato T, Tabata S, Yoshimoto N, Noji M, Saito K (2008) Comparative genomics and reverse genetics analysis reveal indispensable functions of the serine acetyltransferase gene family in Arabidopsis. Plant Cell 20: 2484-2496.
42. Wiedemann G, Koprivova A, Schneider M, Herschbach C, Reski R, Kopriva S (2007) The role of the novel adenosine 5′-phosphosulfate reductase in regulation of sulfate assimilation of Physcomitrella patens. Plant Mol Biol 65: 667-676.
43. Wiedemann G, Hermsen C, Melzer M, Buttner-Mainik A, Rennenberg H, Reski R, Kopriva S (2010) Targeted knock-out of a gene encoding sulfite reductase in the moss Physcomitrella patens affects gametophytic and sporophytic development. FEBS Lett 584: 2271-2278.
44. Wirtz M, Hell R (2006) Functional analysis of the cysteine synthase protein complex from plants: structural, biochemical and regulatory properties. J Plant Physiol 163: 273-286.
45. Wirtz M, Birke H, Heeg C, Mueller C, Hosp F, Throm C, Koenig S, Feldman-Salit A, Rippe K, Petersen G, Wade RC, Rybin V, Scheffzek K, Hell R (2010a) Structure and function of the hetero-oligomeric cysteine synthase complex in plants. J Biol Chem 285: 32810-32817.
46. α-terminal acetylation. Amino Acids 39: 1077-1086.
47. Zuckerkandl E, Pauling L (1965) Molecules as documents of evolutionary history. J Theor Biol 8: 357-366.