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Volumn 63, Issue 4, 2012, Pages 835-843

Community Structure, Abundance, and Activity of Methanotrophs in the Zoige Wetland of the Tibetan Plateau

Author keywords

[No Author keywords available]

Indexed keywords

METHANE; METHANE MONOOXYGENASE; OXYGENASE; RNA 16S;

EID: 84864352561     PISSN: 00953628     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00248-011-9981-x     Document Type: Article
Times cited : (57)

References (41)
  • 2
    • 84864368424 scopus 로고    scopus 로고
    • Climate Change 2007: The physical science basis. summary for policymakers. Contribution of Working Group I to the fourth assessment report of the Intergovernmental Panel on Climate Change
    • IPCC
    • IPCC (2007) Climate Change 2007: The physical science basis. summary for policymakers. Contribution of Working Group I to the fourth assessment report of the Intergovernmental Panel on Climate Change. Paris: Summary for Policymakers formally approved at the 10th Session of Working Group I of the IPCC.
    • (2007) Paris: Summary For Policymakers Formally Approved At the 10th Session of Working Group I of the IPCC
  • 3
    • 0029883208 scopus 로고    scopus 로고
    • Regulation of methane oxidation in a freshwater wetland by water table changes and anoxia
    • Roslev P, King GM (1996) Regulation of methane oxidation in a freshwater wetland by water table changes and anoxia. FEMS Microbiol Ecol 19: 105-115.
    • (1996) FEMS Microbiol Ecol , vol.19 , pp. 105-115
    • Roslev, P.1    King, G.M.2
  • 4
    • 0035043535 scopus 로고    scopus 로고
    • Production, oxidation, emission and consumption of methane by soils: a review
    • Le Mer J, Roger P (2001) Production, oxidation, emission and consumption of methane by soils: a review. Eur J Soil Biol 37: 25-50.
    • (2001) Eur J Soil Biol , vol.37 , pp. 25-50
    • Le Mer, J.1    Roger, P.2
  • 5
    • 70449488421 scopus 로고    scopus 로고
    • Global warming and carbon dynamics in permafrost soils: Methane production and oxidation
    • Wagner D, Liebner S (2009) Global warming and carbon dynamics in permafrost soils: methane production and oxidation. Permafrost soils: 219-236.
    • (2009) Permafrost Soils , pp. 219-236
    • Wagner, D.1    Liebner, S.2
  • 6
    • 0027374969 scopus 로고
    • Revised taxonomy of the methanotrophs description of Methylobacter gen. nov., emendation of Methylococcus, validation of Methylosinus and Methylocystis species, and a proposal that the family Methylococcaceae includes only the group-I methanotrophs
    • Bowman JP, Sly LI, Nichols PD, Hayward AC (1993) Revised taxonomy of the methanotrophs description of Methylobacter gen. nov., emendation of Methylococcus, validation of Methylosinus and Methylocystis species, and a proposal that the family Methylococcaceae includes only the group-I methanotrophs. Int J Syst Bacteriol 43: 735-753.
    • (1993) Int J Syst Bacteriol , vol.43 , pp. 735-753
    • Bowman, J.P.1    Sly, L.I.2    Nichols, P.D.3    Hayward, A.C.4
  • 10
    • 38349102157 scopus 로고    scopus 로고
    • Methane oxidation at 55 degrees and pH 2 by a thermoacidophilic bacterium belonging to the Verrucomicrobia phylum
    • Islam T, Jensen S, Reigstad LJ, Larsen O, Birkeland NK (2008) Methane oxidation at 55 degrees and pH 2 by a thermoacidophilic bacterium belonging to the Verrucomicrobia phylum. P Natl Acad Sci USA 105: 300-304.
    • (2008) P Natl Acad Sci USA , vol.105 , pp. 300-304
    • Islam, T.1    Jensen, S.2    Reigstad, L.J.3    Larsen, O.4    Birkeland, N.K.5
  • 11
    • 0003238763 scopus 로고    scopus 로고
    • The methanotrophs-the families Methylococcaceae and Methylocystaceae
    • Bowman J (2006) The methanotrophs-the families Methylococcaceae and Methylocystaceae. Prokaryotes 5: 266-289.
    • (2006) Prokaryotes , vol.5 , pp. 266-289
    • Bowman, J.1
  • 12
    • 0003238763 scopus 로고    scopus 로고
    • The methanotrophs-the families Methylococcaceae and Methylocystaceae
    • M. Dworkin, S. Falkow, E. Rosenberg, K.-H. Schleifer, and E. Stackebrandt (Eds.), New York: Springer
    • Bowman JP (1999) The methanotrophs-the families Methylococcaceae and Methylocystaceae. In: Dworkin M, Falkow S, Rosenberg E, Schleifer K-H, Stackebrandt E (eds) Prokaryotes. Springer, New York, pp 266-289.
    • (1999) Prokaryotes , pp. 266-289
    • Bowman, J.P.1
  • 13
    • 0031573009 scopus 로고    scopus 로고
    • The particulate methane monooxygenase gene pmoA and its use as a functional gene probe for methanotrophs
    • McDonald I, Murrell J (1997) The particulate methane monooxygenase gene pmoA and its use as a functional gene probe for methanotrophs. FEMS Microbiol Lett 156: 205-210.
    • (1997) FEMS Microbiol Lett , vol.156 , pp. 205-210
    • McDonald, I.1    Murrell, J.2
  • 14
    • 27644489500 scopus 로고    scopus 로고
    • Community-level analysis: key genes of aerobic methane oxidation
    • Dumont MG, Murrell JC (2005) Community-level analysis: key genes of aerobic methane oxidation. Method Enzymol 397: 413-427.
    • (2005) Method Enzymol , vol.397 , pp. 413-427
    • Dumont, M.G.1    Murrell, J.C.2
  • 15
    • 79960099987 scopus 로고    scopus 로고
    • Methyloferula stellata gen. nov., sp. nov., an acidophilic, obligately methanotrophic bacterium possessing only a soluble methane monooxygenase
    • Vorobev AV, Baani M, Doronina NV, Brady AL, Liesack W, Dunfield PF, Dedysh SN (2011) Methyloferula stellata gen. nov., sp. nov., an acidophilic, obligately methanotrophic bacterium possessing only a soluble methane monooxygenase. Int J of Syst Evol Microbiol 61(Pt 10): 2456-2463.
    • (2011) Int J of Syst Evol Microbiol , vol.61 , Issue.Pt 10 , pp. 2456-2463
    • Vorobev, A.V.1    Baani, M.2    Doronina, N.V.3    Brady, A.L.4    Liesack, W.5    Dunfield, P.F.6    Dedysh, S.N.7
  • 17
    • 0038221311 scopus 로고    scopus 로고
    • Quantitative detection of methanotrophs in soil by novel pmoA-targeted real-time PCR assays
    • Kolb S, Knief C, Stubner S, Conrad R (2003) Quantitative detection of methanotrophs in soil by novel pmoA-targeted real-time PCR assays. Appl Environ Microbiol 69: 2423-2429.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 2423-2429
    • Kolb, S.1    Knief, C.2    Stubner, S.3    Conrad, R.4
  • 18
    • 34447286937 scopus 로고    scopus 로고
    • Methane emission from natural wetlands in China: summary of years 1995-2004 studies
    • Ding WX, Cai ZC (2007) Methane emission from natural wetlands in China: summary of years 1995-2004 studies. Pedosphere 17: 475-486.
    • (2007) Pedosphere , vol.17 , pp. 475-486
    • Ding, W.X.1    Cai, Z.C.2
  • 19
    • 0347479185 scopus 로고    scopus 로고
    • Preliminary budget of methane emissions from natural wetlands in China
    • Ding WX, Cai ZC, Wang DX (2004) Preliminary budget of methane emissions from natural wetlands in China. Atmos Environ 38: 751-759.
    • (2004) Atmos Environ , vol.38 , pp. 751-759
    • Ding, W.X.1    Cai, Z.C.2    Wang, D.X.3
  • 20
    • 0346025798 scopus 로고    scopus 로고
    • Methane emissions from wetlands on the Qinghai-Tibet Plateau
    • Jin HJ, Wu J, Cheng GD, Tomoko N, Sun GY (1999) Methane emissions from wetlands on the Qinghai-Tibet Plateau. Chin Sci Bull 44: 2282-2286.
    • (1999) Chin Sci Bull , vol.44 , pp. 2282-2286
    • Jin, H.J.1    Wu, J.2    Cheng, G.D.3    Tomoko, N.4    Sun, G.Y.5
  • 21
    • 0032104073 scopus 로고    scopus 로고
    • Seasonal variation in methane oxidation by the rhizosphere of Phragmites australis and Scirpus lacustris
    • van der Nat FJWA, Middelburg JJ (1998) Seasonal variation in methane oxidation by the rhizosphere of Phragmites australis and Scirpus lacustris. Aquat Bot 61: 95-110.
    • (1998) Aquat Bot , vol.61 , pp. 95-110
    • van der Nat, F.J.W.A.1    Middelburg, J.J.2
  • 22
    • 0033796297 scopus 로고    scopus 로고
    • Evaluation of methane oxidation in therhizosphere of a Carex dominated fen in northcentral Alberta, Canada
    • Popp TJ, Chanton JP, Whiting GJ, Grant N (2000) Evaluation of methane oxidation in therhizosphere of a Carex dominated fen in northcentral Alberta, Canada. Biogeochemistry 51: 259-281.
    • (2000) Biogeochemistry , vol.51 , pp. 259-281
    • Popp, T.J.1    Chanton, J.P.2    Whiting, G.J.3    Grant, N.4
  • 23
    • 77955486579 scopus 로고    scopus 로고
    • Diversity of methanotrophs in Zoige wetland soils under both anaerobic and aerobic conditions
    • Yun J, Ma A, Li Y, Zhuang G, Wang Y, Zhang H (2010) Diversity of methanotrophs in Zoige wetland soils under both anaerobic and aerobic conditions. J Environ Sci 22: 1232-1238.
    • (2010) J Environ Sci , vol.22 , pp. 1232-1238
    • Yun, J.1    Ma, A.2    Li, Y.3    Zhuang, G.4    Wang, Y.5    Zhang, H.6
  • 24
    • 53549126358 scopus 로고    scopus 로고
    • Analysis, utilization and protection of wetland resources in the Northwest Plateau of Sichuan Province
    • Zhou HM, Zen LX, Yu GN, Liu DC (1999) Analysis, utilization and protection of wetland resources in the Northwest Plateau of Sichuan Province. Southwest China Journal of Agricultural Sciences 12: 69-74.
    • (1999) Southwest China Journal of Agricultural Sciences , vol.12 , pp. 69-74
    • Zhou, H.M.1    Zen, L.X.2    Yu, G.N.3    Liu, D.C.4
  • 25
    • 79955072428 scopus 로고
    • Pollen composition, paleovegetation and paleoclimate of peatlands in Zoige Plateau
    • Wang MH (1987) Pollen composition, paleovegetation and paleoclimate of peatlands in Zoige Plateau. Scientia Geographica Sinica 18: 145-155.
    • (1987) Scientia Geographica Sinica , vol.18 , pp. 145-155
    • Wang, M.H.1
  • 26
    • 44849104463 scopus 로고
    • Study of the environment and ecology of wetland, meadow in Zoige Plateau (in Chinese)
    • Yang F, Dong Z (1993) Study of the environment and ecology of wetland, meadow in Zoige Plateau (in Chinese). J Sichuan Grassland 14: 1-7.
    • (1993) J Sichuan Grassland , vol.14 , pp. 1-7
    • Yang, F.1    Dong, Z.2
  • 27
    • 0035458355 scopus 로고    scopus 로고
    • Detection of methanotroph diversity on roots of submerged rice plants by molecular retrieval of pmoA, mmoX, mxaF, and 16S rRNA and ribosomal DNA, including pmoA-based terminal restriction fragment length polymorphism profiling
    • Horz HP, Yimga MT, Liesack W (2001) Detection of methanotroph diversity on roots of submerged rice plants by molecular retrieval of pmoA, mmoX, mxaF, and 16S rRNA and ribosomal DNA, including pmoA-based terminal restriction fragment length polymorphism profiling. Appl Environ Microb 67: 4177-4185.
    • (2001) Appl Environ Microb , vol.67 , pp. 4177-4185
    • Horz, H.P.1    Yimga, M.T.2    Liesack, W.3
  • 28
    • 0030048084 scopus 로고    scopus 로고
    • Relief of amplification inhibition in PCR with bovine serum albumin or T4 gene 32 protein
    • Kreader CA (1996) Relief of amplification inhibition in PCR with bovine serum albumin or T4 gene 32 protein. Appl Environ Microbiol 62: 1102-1106.
    • (1996) Appl Environ Microbiol , vol.62 , pp. 1102-1106
    • Kreader, C.A.1
  • 29
    • 0033862808 scopus 로고    scopus 로고
    • Basic principles of quantitative PCR
    • Raeymaekers L (2000) Basic principles of quantitative PCR. Mol Biotechnol 15: 115-122.
    • (2000) Mol Biotechnol , vol.15 , pp. 115-122
    • Raeymaekers, L.1
  • 30
    • 0033760479 scopus 로고    scopus 로고
    • Quantitative analysis of small-subunit rRNA genes in mixed microbial populations via 5′-nuclease assays
    • Suzuki MT, Taylor LT, DeLong EF (2000) Quantitative analysis of small-subunit rRNA genes in mixed microbial populations via 5′-nuclease assays. Appl Environ Microb 66: 4605-4614.
    • (2000) Appl Environ Microb , vol.66 , pp. 4605-4614
    • Suzuki, M.T.1    Taylor, L.T.2    Delong, E.F.3
  • 31
    • 0036242945 scopus 로고    scopus 로고
    • Enumeration of 16S rDNA of Desulfotomaculum lineage 1 in rice field soil by real-time PCR with SybrGreen (TM) detection
    • Stubner S (2002) Enumeration of 16S rDNA of Desulfotomaculum lineage 1 in rice field soil by real-time PCR with SybrGreen (TM) detection. J Microbiol Meth 50: 155-164.
    • (2002) J Microbiol Meth , vol.50 , pp. 155-164
    • Stubner, S.1
  • 32
    • 0027968068 scopus 로고
    • CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 33
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4. 0. Mol Biol Evol 24: 1596-1599.
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 34
    • 34848889783 scopus 로고    scopus 로고
    • Identification of active methanotrophs in a landfill cover soil through detection of expression of 16S rRNA and functional genes
    • Chen Y, Dumont MG, Cebron A, Murrell JC (2007) Identification of active methanotrophs in a landfill cover soil through detection of expression of 16S rRNA and functional genes. Environ Microbiol 9: 2855-2869.
    • (2007) Environ Microbiol , vol.9 , pp. 2855-2869
    • Chen, Y.1    Dumont, M.G.2    Cebron, A.3    Murrell, J.C.4
  • 35
    • 0032703075 scopus 로고    scopus 로고
    • Methanotroph diversity in landfill soil: isolation of novel type I and type II methanotrophs whose presence was suggested by culture-independent 16S ribosomal DNA analysis
    • Wise M, McArthur J, Shimkets L (1999) Methanotroph diversity in landfill soil: isolation of novel type I and type II methanotrophs whose presence was suggested by culture-independent 16S ribosomal DNA analysis. Appl Environ Microb 65: 4887.
    • (1999) Appl Environ Microb , vol.65 , pp. 4887
    • Wise, M.1    McArthur, J.2    Shimkets, L.3
  • 36
    • 1042267966 scopus 로고    scopus 로고
    • Methanotrophic diversity in high arctic wetlands on the islands of Svalbard (Norway)-denaturing gradient gel electrophoresis analysis of soil DNA and enrichment cultures
    • Wartiainen I, Hestnes AG, Svenning MM (2003) Methanotrophic diversity in high arctic wetlands on the islands of Svalbard (Norway)-denaturing gradient gel electrophoresis analysis of soil DNA and enrichment cultures. Can J Microbiol 49: 602-612.
    • (2003) Can J Microbiol , vol.49 , pp. 602-612
    • Wartiainen, I.1    Hestnes, A.G.2    Svenning, M.M.3
  • 38
    • 22744436213 scopus 로고    scopus 로고
    • Aerobic methane oxidation and methanotroph community composition during seasonal stratification in Mono Lake, California (USA)
    • Carini S, Bano N, LeCleir G, Joye S (2005) Aerobic methane oxidation and methanotroph community composition during seasonal stratification in Mono Lake, California (USA). Environ Microbiol 7: 1127-1138.
    • (2005) Environ Microbiol , vol.7 , pp. 1127-1138
    • Carini, S.1    Bano, N.2    Lecleir, G.3    Joye, S.4
  • 39
    • 58149084076 scopus 로고    scopus 로고
    • Diversity of aerobic methanotrophic bacteria in a permafrost active layer soil of the Lena Delta, Siberia
    • Liebner S, Rublack K, Stuehrmann T, Wagner D (2009) Diversity of aerobic methanotrophic bacteria in a permafrost active layer soil of the Lena Delta, Siberia. Microbial Ecol 57: 25-35.
    • (2009) Microbial Ecol , vol.57 , pp. 25-35
    • Liebner, S.1    Rublack, K.2    Stuehrmann, T.3    Wagner, D.4
  • 41
    • 0032746991 scopus 로고    scopus 로고
    • Molecular characterization of functional and phylogenetic genes from natural populations of methanotrophs in lake sediments
    • Costello AM, Lidstrom ME (1999) Molecular characterization of functional and phylogenetic genes from natural populations of methanotrophs in lake sediments. Appl Environ Microbiol 65: 5066-5074.
    • (1999) Appl Environ Microbiol , vol.65 , pp. 5066-5074
    • Costello, A.M.1    Lidstrom, M.E.2


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