Proteomic profiling of the hemolymph at the fifth instar of the silkworm Bombyx mori

Insect Science

Volumn 19, Issue 4, 2012, Pages 441-454

  Li, Jian Ying ^a   Li, Ji Sheng ^a   Zhong, Bo Xiong ^a  

^a ZHEJIANG UNIVERSITY   (China)

Author keywords

Bombyx mori; Gene ontology; Hemolymph; LTQ Orbitrap; Pathway; Proteomics

Indexed keywords

BOMBYX MORI; HEXAPODA;

EID: 84864319385     PISSN: 16729609     EISSN: 17447917     Source Type: Journal    
DOI: 10.1111/j.1744-7917.2011.01452.x     Document Type: Article

References (35)

1. Bogaerts, A., Baggerman, G., Vierstraete, E., Schoofs, L. and Verleyen, P. (2009) The hemolymph proteome of the honeybee: Gel-based or gel-free? Proteomics, 9, 3201-3208.
2. Brennan, C.A. and Anderson, K.V. (2004) Drosophila: The genetics of innate immune recognition and response. Annual Review of Immunology, 22, 457-483.
3. Dammai, V., Adryan, B., Lavenburg, K.R. and Hsu, T. (2003) Drosophila awd, the homolog of human nm23, regulates FGF receptor levels and functions synergistically with shi/dynamin during tracheal development. Genes & Development, 17, 2812-2824.
4. Elias, J.E. and Gygi, S.P. (2007) Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry. Nature Methods, 4, 207-214.
5. Gene Ontology Consortium (2008) The gene ontology project in 2008. Nucleic Acids Research, 36 (Database issue), D440-D444.
6. Haunerland, N.H. (1996) Insect storage proteins: gene families and receptors. Insect Biochemistry and Molecular Biology, 26, 755-765.
7. Hou, Y., Zou, Y., Wang, F., Gong, J., Zhong, X., Xia, Q. and Zhao, P. (2010) Comparative analysis of proteome maps of silkworm hemolymph during different developmental stages. Proteome Science, 8, 45.
8. Iketani, M., Nishimura, H., Akayama, K., Yamano, Y. and Morishima, I. (1999) Minimum structure of peptidoglycan required for induction of antibacterial protein synthesis in the silkworm, Bombyx mori. Insect Biochemistry and Molecular Biology, 29, 19-24.
9. International Silkworm Genome Consortium (2008) The genome of a lepidopteran model insect, the silkworm Bombyx mori. Insect Biochemistry and Molecular Biology, 38, 1036-1045.
10. Izumi, S., Fujie, J., Yamada, S. and Tomino, S. (1981) Molecular properties and biosynthesis of major plasma proteins in Bombyx mori. Biochimica et Biophysica Acta (BBA) - Protein Structure, 670, 222-229.
11. Kawamura, K., Shibata, T., Saget, O., Peel, D. and Bryant, P.J. (1999) A new family of growth factors produced by the fat body and active on Drosophila imaginal disc cells. Development, 126, 211-219.
12. Keller, A., Eng, J., Zhang, N., Li, X.J. and Aebersold, R. (2005) A uniform proteomics MS/MS analysis platform utilizing open XML file formats. Molecular Systems Biology, 1, 0017.
13. Kishimoto, A., Nakato, H., Izumi, S. and Tomino, S. (1999) Biosynthesis of major plasma proteins in the primary culture of fat body cells from the silkworm, Bombyx mori. Cell and Tissue Research, 297, 329-335.
14. Levy, F., Bulet, P. and Ehret-Sabatier, L. (2004) Proteomic analysis of the systemic immune response of Drosophila. Molecular & Cellular Proteomics, 3, 156-166.
15. Li, J.Y., Chen, X., Fan, W., Hosseini Moghaddam, S.H., Chen, M., Zhou, Z.H., Yang, H.J., Chen, J.E. and Zhong, B.X. (2009a) Proteomic and bioinformatic analysis on endocrine organs of domesticated silkworm, Bombyx mori L. for a comprehensive understanding of their roles and relations. Journal of Proteome Research, 8, 2620-2632.
16. Li, J.Y., Chen, X., Hosseini Moghaddam, S.H., Chen, M., Wei, H. and Zhong, B.X. (2009b) Shotgun proteomics approach to characterizing the embryonic proteome of the silkworm, Bombyx mori, at labrum appearance stage. Insect Molecular Biology, 18, 649-660.
17. Li, J.Y., Hosseini Moghaddam, S.H., Chen, J.E., Chen, M. and Zhong, B.X. (2010a) Shotgun proteomic analysis on the embryos of silkworm Bombyx mori at the end of organogenesis. Insect Biochemistry and Molecular Biology, 40, 293-302.
18. Li, J., Hosseini Moghaddam, S.H., Chen, X., Chen, M. and Zhong, B. (2010b) Shotgun strategy-based proteome profiling analysis on the head of silkworm Bombyx mori. Amino Acids, 39, 751-761.
19. Li, X.H., Wu, X.F., Yue, W.F., Liu, J.M., Li, G.L. and Miao, Y.G. (2006) Proteomic analysis of the silkworm (Bombyx mori L.) hemolymph during developmental stage. Journal of Proteome Research, 5, 2809-2814.
20. Mori, S., Izumi, S. and Tomino, S. (1991) Structures and organization of major plasma-protein genes of the silkworm Bombyx mori. Journal of Biological Chemistry, 218, 7-12.
21. Nikitin, A., Egorov, S., Daraselia, N. and Mazo, I. (2003) Pathway studio-the analysis and navigation of molecular networks. Bioinformatics, 19, 2155-2157.
22. Norvell, A., Kelley, R.L., Wehr, K. and Schüpbach, T. (1999) Specific isoforms of squid, a Drosophila hnRNP, perform distinct roles in Gurken localization during oogenesis. Genes & Development, 13, 864-876.
23. Ogawa, N., Kishimoto, A., Asano, T. and Izumi, S. (2005) The homeodomain protein PBX participates in JH-related suppressive regulation on the expression of major plasma protein genes in the silkworm, Bombyx mori. Insect Biochemistry and Insect Molecular Biology, 35, 217-229.
24. Paskewitz, S.M. and Shi, L. (2005) The hemolymph proteome of Anopheles gambiae. Insect Biochemistry and Molecular Biology, 35, 815-824.
25. Sakurai, H., Fujii, T., Izumi, S. and Tomino, S. (1988) Structure and expression of gene coding for sex-specific storage protein of Bombyx mori. Journal of Biological Chemistry, 263, 7876-7880.
26. Shevchenko, A., Tomas, H., Havlis, J., Olsen, J.V. and Mann, M. (2006) In-gel digestion for mass spectrometric characterization of proteins and proteomes. Nature Protocols, 1, 2856-2860.
27. Song, K.H., Jung, S.J., Seo, Y.R., Kang, S.W. and Han, S.S. (2006) Identification of up-regulated proteins in the hemolymph of immunized Bombyx mori larvae. Comparative Biochemistry and Physiology. Part D, Genomics & Proteomics, 1, 260-266.
28. Timmons, L., Hersperger, E., Woodhouse, E., Xu, J., Liu, L.Z. and Shearn, A. (1993) The expression of the Drosophila awd gene during normal development and in neoplastic brain tumors caused by lgl mutations. Developmental Biology, 158, 364-379.
29. Tojo, S., Nagata, M. and Kobayashi, M. (1980) Storage proteins in the silkworm, Bombyx mori. Insect Biochemistry, 10, 289-303.
30. Wang, H.B., Sakudoh, T., Kawasaki, H., Iwanaga, M., Araki, K., Fujimoto, H., Takada, N., Iwano, H. and Tsuchida, K. (2009) Purification and expression analysis of imaginal disc growth factor in the silkworm, Bombyx mori. Journal of Insect Physiology, 55, 1065-1071.
31. Wheeler, D.E., Tuchinskaya, I., Buck, N.A. and Tabashnik, B.E. (2000) Hexameric storage proteins during metamorphosis and egg production in the diamondback moth, Plutella xylostella (Lepidoptera). Journal of Insect Physiology, 46, 951-958.
32. Yoshida, H., Kinoshita, K. and Ashida, M. (1996) Purification of a peptidoglycan recognition protein from hemolymph of the silkworm, Bombyx mori. Journal of Biological Chemistry, 271, 13854-13860.
33. Zha, X.F., Xia, Q.Y., Zhao, P., Li, J., Duan, J., Wang, Z.L., Qian, J.F. and Xiang, Z.H. (2005) Detection and analysis of alternative splicing in the silkworm by aligning expressed sequence tags with the genomic sequence. Insect Molecular Biology, 14, 113-119.
34. Zhong, B.X., Li, J.K., Lin, J.R., Liang, J.S., Su, S.K., Xu, H.S., Yan, H.Y., Zhang, P.B. and Fujii, H. (2005) Possible effect of 30K proteins in embryonic development of silkworm Bombyx mori. Acta Biochimica et Biophysica Sinica, 37, 355-361.
35. Zhou, Z.H., Yang, H.J., Chen, M., Lou, C.F., Zhang, Y.Z., Chen, K.P., Wang, Y., Yu, M.L., Yu, F., Li, J.Y. and Zhong, B.X. (2008) Comparative proteomic analysis between the domesticated silkworm (Bombyx mori) reared on fresh mulberry leaves and on artificial diet. Journal of Proteome Research, 7, 5103-5111.