-
1
-
-
4344707219
-
Pyruvate phosphate dikinase and pyrophosphate metabolism in the glycosome of trypanosoma cruzei epimastogotes
-
Acosta, H., Dubourdieu, M., Quiñones, W., Cáceres, A., Bringaud, F., Concepción, J. L. 2004. Pyruvate phosphate dikinase and pyrophosphate metabolism in the glycosome of trypanosoma cruzei epimastogotes. Comp Biochem Mol Biol 138, 347-356.
-
(2004)
Comp Biochem Mol Biol
, vol.138
, pp. 347-356
-
-
Acosta, H.1
Dubourdieu, M.2
Quiñones, W.3
Cáceres, A.4
Bringaud, F.5
Concepción, J.L.6
-
2
-
-
9144257886
-
The Pfam protein families' database
-
Bateman, A., Coin, L., Durbin, R., Finn, R. D., Hollich, V., Griffiths, J. S., Khanna, A., Marshall, M., Moxon, S., Sonnhammer, E. L., Studholme, D. J., Yeats, C., Eddy, S. R. 2004. The Pfam protein families' database. Nucleic Acids Res 32, 138-141.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 138-141
-
-
Bateman, A.1
Coin, L.2
Durbin, R.3
Finn, R.D.4
Hollich, V.5
Griffiths, J.S.6
Khanna, A.7
Marshall, M.8
Moxon, S.9
Sonnhammer, E.L.10
Studholme, D.J.11
Yeats, C.12
Eddy, S.R.13
-
3
-
-
33644877685
-
The Pfam protein families database
-
Castrignanò, T., De Meo, P. D., Cozzetto, D., Talamo, I. G., Tramontano, A. 2006. The Pfam protein families database. Nucleic Acids Res 34, 306-309.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 306-309
-
-
Castrignanò, T.1
De Meo, P.D.2
Cozzetto, D.3
Talamo, I.G.4
Tramontano, A.5
-
4
-
-
33947392575
-
Screening marine fungi for inhibitors of the C4 plant enzyme pyruvate phosphate dikinase: Unguinol as a potential novel herbicide candidate
-
Cherie, A. M., David, G. B., James, N. B., Jason, R. D., Dianne, S. H., Catherine, H. L., Lyndon, E. L., Shilo, L., Andrew, M., Dianne, M. T. 2007. Screening marine fungi for inhibitors of the C4 plant enzyme pyruvate phosphate dikinase: Unguinol as a potential novel herbicide candidate. Appl Environ Microbiol 73, 1921-1927.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 1921-1927
-
-
Cherie, A.M.1
David, G.B.2
James, N.B.3
Jason, R.D.4
Dianne, S.H.5
Catherine, H.L.6
Lyndon, E.L.7
Shilo, L.8
Andrew, M.9
Dianne, M.T.10
-
5
-
-
0035983518
-
The 3.0 Å resolution crystal structure of glycosomal pyruvate phosphate dikinase from trypanosoma brucei
-
Cosenza, L. W., Bringuad, F., Baltz, T., Vellieux, F. M. 2002. The 3. 0 Å resolution crystal structure of glycosomal pyruvate phosphate dikinase from trypanosoma brucei. J Mol Biol 318, 1417-1432.
-
(2002)
J Mol Biol
, vol.318
, pp. 1417-1432
-
-
Cosenza, L.W.1
Bringuad, F.2
Baltz, T.3
Vellieux, F.M.4
-
6
-
-
38349026289
-
The catalyzing role of PPDK in Giardia lamblia
-
Feng, X. M., Cao, L. J., Adam, R. D., Zhand, X. C., Lu, S. Q. 2008. The catalyzing role of PPDK in Giardia lamblia. Biochem Biophys Res Commun 367, 394-398.
-
(2008)
Biochem Biophys Res Commun
, vol.367
, pp. 394-398
-
-
Feng, X.M.1
Cao, L.J.2
Adam, R.D.3
Zhand, X.C.4
Lu, S.Q.5
-
7
-
-
1642310340
-
Glide: A new approach for rapid, accurate docking and scoring. 2. Enrichment factors in database screening
-
Halgren, T. A., Murphy, R. B., Friesner, R. A., Beard, H. S., Frye, L. L., Pollard, W. T., Banks, J. L. 2004. Glide: A new approach for rapid, accurate docking and scoring. 2. Enrichment factors in database screening. J Med Chem 47, 1750-1759.
-
(2004)
J Med Chem
, vol.47
, pp. 1750-1759
-
-
Halgren, T.A.1
Murphy, R.B.2
Friesner, R.A.3
Beard, H.S.4
Frye, L.L.5
Pollard, W.T.6
Banks, J.L.7
-
8
-
-
0017338724
-
Properties of carboxytranphosphorylase; pyruvate phosphate dikinase, pyrophosphate-phosphofructokinase and phosphate acetate kinase and their roles in metabolism of inorganic phosphate
-
Harland, G. W., O'Brien, W. E., George, M. 1977. Properties of carboxytranphosphorylase; pyruvate phosphate dikinase, pyrophosphate-phosphofructokinase and phosphate acetate kinase and their roles in metabolism of inorganic phosphate. Adv Enzymol Relat Areas Mol Biol 45, 85-155.
-
(1977)
Adv Enzymol Relat Areas Mol Biol
, vol.45
, pp. 85-155
-
-
Harland, G.W.1
O'Brien, W.E.2
George, M.3
-
9
-
-
0029911754
-
Swiveling-domain mechanism for enzymatic phosphotransfer between reaction sites
-
Herzberg, O., Chen, C. C., Kapadia, G., McGuire, M., Carroll, L. J., Noh, S. J., Dunaway, M. D. 1996. Swiveling-domain mechanism for enzymatic phosphotransfer between reaction sites. Proc Natl Acad Sci USA 93, 2652-2657.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 2652-2657
-
-
Herzberg, O.1
Chen, C.C.2
Kapadia, G.3
McGuire, M.4
Carroll, L.J.5
Noh, S.J.6
Dunaway, M.D.7
-
10
-
-
0037154102
-
Pyruvate site of pyruvate phosphate dikinase: Crystal structure of the enzyme phosphonopyruvate complex and mutant analysis
-
Herzberg, O., Chen, C. C., Liu, S., Tempczyk, A., Howard, A., Wei, M., Ye, D., Dunaway, M. D. 2002. Pyruvate site of pyruvate phosphate dikinase: Crystal structure of the enzyme phosphonopyruvate complex and mutant analysis. Biochemistry 41, 780-787.
-
(2002)
Biochemistry
, vol.41
, pp. 780-787
-
-
Herzberg, O.1
Chen, C.C.2
Liu, S.3
Tempczyk, A.4
Howard, A.5
Wei, M.6
Ye, D.7
Dunaway, M.D.8
-
11
-
-
0033824470
-
DaliLite workbench for protein structure comparison
-
Holm, L., Park, J. 2000. DaliLite workbench for protein structure comparison. Bioinformatics 16, 566-567.
-
(2000)
Bioinformatics
, vol.16
, pp. 566-567
-
-
Holm, L.1
Park, J.2
-
12
-
-
21144432943
-
The Wolbachia genome of Brugia malayi: Endosymbiont evolution with a human pathogenic nematode
-
Jeremy, F., Mehul, G., Ibrahim, K., Jennifer, W., Kira, M., Natalia, I., Anamitra, B., Vinayak, K., Sanjay, K., Janos, P., Tamas, V., Jessica, I., Laurie, M., Alla, L., Marina, O., Nikos, K., Elodie, G., Shiliang, W., Eugene, G., Victor, J., Olga, O., Kiryl, T., Mikhail, M., Donald, C., Eugene, K., Barton, S. 2005. The Wolbachia genome of Brugia malayi: Endosymbiont evolution with a human pathogenic nematode. PLos Biol 3, 121.
-
(2005)
PLos Biol
, vol.3
, pp. 121
-
-
Jeremy, F.1
Mehul, G.2
Ibrahim, K.3
Jennifer, W.4
Kira, M.5
Natalia, I.6
Anamitra, B.7
Vinayak, K.8
Sanjay, K.9
Janos, P.10
Tamas, V.11
Jessica, I.12
Laurie, M.13
Alla, L.14
Marina, O.15
Nikos, K.16
Elodie, G.17
Shiliang, W.18
Eugene, G.19
Victor, J.20
Olga, O.21
Kiryl, T.22
Mikhail, M.23
Donald, C.24
Eugene, K.25
Barton, S.26
more..
-
13
-
-
0033818145
-
Long PCR improves Wolbachia DNA amplification: WSP sequences found in 76% of 63 arthropod species
-
Jeyaprakash, A., Hoy, M. A. 2000. Long PCR improves Wolbachia DNA amplification: WSP sequences found in 76% of 63 arthropod species. Insect Mol Biol 9, 393-405.
-
(2000)
Insect Mol Biol
, vol.9
, pp. 393-405
-
-
Jeyaprakash, A.1
Hoy, M.A.2
-
14
-
-
0017727943
-
Intracytoplasmic bacteria in Onchocerca volvulus
-
Kozek, W. J., Marroquin, H. F. 1977. Intracytoplasmic bacteria in Onchocerca volvulus. Am J Trop Med Hyg 26, 663-678.
-
(1977)
Am J Trop Med Hyg
, vol.26
, pp. 663-678
-
-
Kozek, W.J.1
Marroquin, H.F.2
-
15
-
-
36448991500
-
ClustalW and ClustalX version 2.0
-
Larkin, M. A., Blackshields, G., Brown, N. P., Chenna, R., McGettigan, P. A., McWilliam, H., Valentin, F., Wallace, I. M., Wilm, A., Lopez, R., Thompson, J. D., Gibson, T. J., Higgins, D. G. 2007. ClustalW and ClustalX version 2. 0. Bioinformatics 23, 2947-2945.
-
(2007)
Bioinformatics
, vol.23
, pp. 2945-2947
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
Valentin, F.7
Wallace, I.M.8
Wilm, A.9
Lopez, R.10
Thompson, J.D.11
Gibson, T.J.12
Higgins, D.G.13
-
16
-
-
0000243829
-
PROCHECK - a program to check the stereochemical quality of protein structures
-
Laskowski, R. A., MacArthur, M. W., Moss, D. S., Thornton, J. M. 1993. PROCHECK - a program to check the stereochemical quality of protein structures. J App Cryst 26, 283-291.
-
(1993)
J App Cryst
, vol.26
, pp. 283-291
-
-
Laskowski, R.A.1
MacArthur, M.W.2
Moss, D.S.3
Thornton, J.M.4
-
17
-
-
18744394070
-
Q-Site Finder: An energy-based method for the prediction of proteinligand binding sites
-
Laurie, A. T., Jackson, R. M. 2005. Q-Site Finder: An energy-based method for the prediction of proteinligand binding sites. Bioinformatics 21, 1908-1916.
-
(2005)
Bioinformatics
, vol.21
, pp. 1908-1916
-
-
Laurie, A.T.1
Jackson, R.M.2
-
18
-
-
32344442836
-
Examination of the structure, stability and catalytic potential in the engineered phosphoryl carrier domain of pyruvate phosphate dikinase
-
Lin, Y., Lusin, J. D., Ye, D., Dunaway, M. D., Ames, J. B. 2006. Examination of the structure, stability and catalytic potential in the engineered phosphoryl carrier domain of pyruvate phosphate dikinase. Biochemistry 45, 1702-1711.
-
(2006)
Biochemistry
, vol.45
, pp. 1702-1711
-
-
Lin, Y.1
Lusin, J.D.2
Ye, D.3
Dunaway, M.D.4
Ames, J.B.5
-
19
-
-
0031024171
-
Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings
-
Lipinski, C. A., Lombardo, F., Dominy, B., Wand Feeney, F. J. 1997. Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings. Adv Drug Delivery Rev 23, 3-25.
-
(1997)
Adv Drug Delivery Rev
, vol.23
, pp. 3-25
-
-
Lipinski, C.A.1
Lombardo, F.2
Dominy, B.3
Wand Feeney, F.J.4
-
20
-
-
0016679828
-
Micro-organisms in filarial larvae (Nematoda)
-
McLaren, D. J., Worms, M. J., Laurence, B. R., Simpson, M. G. 1975. Micro-organisms in filarial larvae (Nematoda). Trans R Soc Trop Med Hyg 69, 509-514.
-
(1975)
Trans R Soc Trop Med Hyg
, vol.69
, pp. 509-514
-
-
McLaren, D.J.1
Worms, M.J.2
Laurence, B.R.3
Simpson, M.G.4
-
21
-
-
0027412292
-
ATP versus pyrophosphate: Glycolysis revisited in parasitic protists
-
Mertens, E. 1993. ATP versus pyrophosphate: Glycolysis revisited in parasitic protists. Parasitol Today 9, 122-126.
-
(1993)
Parasitol Today
, vol.9
, pp. 122-126
-
-
Mertens, E.1
-
23
-
-
50049087529
-
The wolbachia endosymbiont of Brugia malayi has an active pyruvate phosphate dikinase
-
Raverdy, S., Foster, J. M., Roopenian, E., Carlow, C. K. 2008. The wolbachia endosymbiont of Brugia malayi has an active pyruvate phosphate dikinase. Mol Biochem Parasitol 160, 163-166.
-
(2008)
Mol Biochem Parasitol
, vol.160
, pp. 163-166
-
-
Raverdy, S.1
Foster, J.M.2
Roopenian, E.3
Carlow, C.K.4
-
24
-
-
0029815186
-
Energy production in Entamoeba histolytica: New perspective in rational drug design
-
Saavedra-Lira, E., Perez-Montfort, R. 1996. Energy production in Entamoeba histolytica: New perspective in rational drug design. Arch Med Res 27, 257-264.
-
(1996)
Arch Med Res
, vol.27
, pp. 257-264
-
-
Saavedra-Lira, E.1
Perez-Montfort, R.2
-
25
-
-
0027136282
-
Comparative protein modeling by satisfaction of spatial restraints
-
Sali, A., Blundell, T. L. 1993. Comparative protein modeling by satisfaction of spatial restraints. J Mol Biol 234, 779-815.
-
(1993)
J Mol Biol
, vol.234
, pp. 779-815
-
-
Sali, A.1
Blundell, T.L.2
-
26
-
-
0034617230
-
Wolbachia infection frequencies in insects: Evidence of a global equilibrium?
-
Werren, J. H., Windsor, D. M. 2000. Wolbachia infection frequencies in insects: Evidence of a global equilibrium? Proc Biol Sci 267, 1277-1285.
-
(2000)
Proc Biol Sci
, vol.267
, pp. 1277-1285
-
-
Werren, J.H.1
Windsor, D.M.2
-
28
-
-
0035813214
-
Investigation of catalytic site within the ATP-grasp domain of clostridium symbiosum. Pyruvate phosphate dikinase
-
Ye, D., Wei, M., McGuire, M. 2001. Investigation of catalytic site within the ATP-grasp domain of clostridium symbiosum. Pyruvate phosphate dikinase. J Mol Chem 276, 37630-37639.
-
(2001)
J Mol Chem
, vol.276
, pp. 37630-37639
-
-
Ye, D.1
Wei, M.2
McGuire, M.3
-
29
-
-
0028924693
-
Location for the catalytic site for phosphoenolpyruvate formation within the primary structure of Clostridium symbiosum pyruvate phosphate dikinase
-
Yuan, X., Linda, Y., Li, S., Young-Shik, J., Patrick, S. M., Dunaway, M. D., Brian, M. M. 1995. Location for the catalytic site for phosphoenolpyruvate formation within the primary structure of Clostridium symbiosum pyruvate phosphate dikinase. Biochemistry 34, 2181-2187.
-
(1995)
Biochemistry
, vol.34
, pp. 2181-2187
-
-
Yuan, X.1
Linda, Y.2
Li, S.3
Young-Shik, J.4
Patrick, S.M.5
Dunaway, M.D.6
Brian, M.M.7
|