IGFBP7's susceptibility to proteolysis is altered by A-to-I RNA editing of its transcript

FEBS Letters

Volumn 586, Issue 16, 2012, Pages 2313-2317

  Godfried Sie, Christina ^a   Hesler, Stephen ^a,b   Maas, Stefan ^a,c   Kuchka, Michael ^a  

^a LEHIGH UNIVERSITY   (United States)

^b ELI LILLY AND COMPANY   (United States)

^c NATIONAL INSTITUTE OF GENERAL MEDICAL SCIENCES   (United States)

Author keywords

ADAR; IGFBP7; Inosine; Proteolysis; RNA editing

Indexed keywords

INSULIN LIKE GROWTH FACTOR BINDING PROTEIN 7; SOMATOMEDIN BINDING PROTEIN; UNCLASSIFIED DRUG;

ARTICLE; CELL STRAIN HEK293; CONTROLLED STUDY; IN VITRO STUDY; PRIORITY JOURNAL; PROTEIN CLEAVAGE; PROTEIN DEGRADATION; PROTEIN EXPRESSION; PROTEIN FUNCTION; PROTEIN PURIFICATION; PROTEIN STRUCTURE; RNA EDITING;

ADENOSINE; ADENOSINE DEAMINASE; BASE SEQUENCE; CELL ADHESION; CELL PROLIFERATION; EXTRACELLULAR MATRIX; FIBROBLASTS; HUMANS; INOSINE; INSULIN-LIKE GROWTH FACTOR BINDING PROTEINS; INSULIN-LIKE GROWTH FACTOR I; MOLECULAR SEQUENCE DATA; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEIN INTERACTION MAPPING; PROTEIN ISOFORMS; PROTEOLYSIS; RNA EDITING; SERINE ENDOPEPTIDASES; TISSUE DISTRIBUTION;

EID: 84864283491     PISSN: 00145793     EISSN: 18733468     Source Type: Journal    
DOI: 10.1016/j.febslet.2012.06.037     Document Type: Article

References (33)

1. B.L. Bass RNA editing by adenosine deaminases that act on RNA Annu. Rev. Biochem. 71 2002 817 846 (Pubitemid 34800236)
2. B. Sommer, M. Kohler, R. Sprengel, and P.H. Seeburg RNA editing in brain controls a determinant of ion flow in glutamate-gated channels Cell 67 1991 11 19 (Pubitemid 121001421)
3. C.M. Burns, H. Chu, S.M. Rueter, L.K. Hutchinson, H. Canton, E. Sanders-Bush, and R.B. Emeson Regulation of serotonin-2C receptor G-protein coupling by RNA editing Nature 387 1997 303 308 (Pubitemid 27220768)
4. K.A. Berg, J.D. Cropper, C.M. Niswender, E. Sanders-Bush, R.B. Emeson, and W.P. Clarke RNA-editing of the 5-HT(2C) receptor alters agonist-receptor- effector coupling specificity Br. J. Pharmacol. 134 2001 386 392 (Pubitemid 32989136)
5. J. Yeo, R.A. Goodman, N.T. Schirle, S.S. David, and P.A. Beal RNA editing changes the lesion specificity for the DNA repair enzyme NEIL1 Proc. Natl. Acad. Sci. U S A 107 2010 20715 20719
6. J.C. Hartner, C.R. Walkley, J. Lu, and S.H. Orkin ADAR1 is essential for the maintenance of hematopoiesis and suppression of interferon signaling Nat. Immunol. 10 2009 109 115
7. C. Collet, and J. Candy How many insulin-like growth factor binding proteins? Mol. Cell. Endocrinol. 139 1998 1 6 (Pubitemid 28340052)
8. Y. Oh, S.R. Nagalla, Y. Yamanaka, H.S. Kim, E. Wilson, and R.G. Rosenfeld Synthesis and characterization of insulin-like growth factor-binding protein (IGFBP)-7. Recombinant human mac25 protein specifically binds IGF-I and -II J. Biol. Chem. 271 1996 30322 30325
9. K. Akaogi, J. Sato, Y. Okabe, Y. Sakamoto, H. Yasumitsu, and K. Miyazaki Synergistic growth stimulation of mouse fibroblasts by tumor-derived adhesion factor with insulin-like growth factors and insulin Cell Growth Differ. 7 1996 1671 1677 (Pubitemid 26415163)
10. C.C. Sprenger, M.E. Vail, K. Evans, J. Simurdak, and S.R. Plymate Over-expression of insulin-like growth factor binding protein-related protein-1(IGFBP-rP1/mac25) in the M12 prostate cancer cell line alters tumor growth by a delay in G1 and cyclin A associated apoptosis Oncogene 21 2002 140 147 (Pubitemid 34076386)
11. H.M. Wilson, R.S. Birnbaum, M. Poot, L.S. Quinn, and K. Swisshelm Insulin-like growth factor binding protein-related protein 1 inhibits proliferation of MCF-7 breast cancer cells via a senescence-like mechanism Cell Growth Differ. 13 2002 205 213 (Pubitemid 34651181)
12. N. Wajapeyee, R.W. Serra, X. Zhu, M. Mahalingam, and M.R. Green Oncogenic BRAF induces senescence and apoptosis through pathways mediated by the secreted protein IGFBP7 Cell 132 2008 363 374 (Pubitemid 351191995)
13. A. Pen, M.J. Moreno, Y. Durocher, P. Deb-Rinker, and D.B. Stanimirovic Glioblastoma-secreted factors induce IGFBP7 and angiogenesis by modulating Smad-2-dependent TGF-beta signaling Oncogene 27 2008 6834 6844
14. K. Tamura, K. Hashimoto, K. Suzuki, M. Yoshie, M. Kutsukake, and T. Sakurai Insulin-like growth factor binding protein-7 (IGFBP7) blocks vascular endothelial cell growth factor (VEGF)-induced angiogenesis in human vascular endothelial cells Eur. J. Pharmacol. 610 2009 61 67
15. A. Lopez-Bermejo, J. Khosravi, J.M. Fernandez-Real, V. Hwa, K.L. Pratt, R. Casamitjana, M.M. Garcia-Gil, R.G. Rosenfeld, and W. Ricart Insulin resistance is associated with increased serum concentration of IGF-binding protein-related protein 1 (IGFBP-rP1/MAC25) Diabetes 55 2006 2333 2339 (Pubitemid 44743632)
16. D. Nagakubo, T. Murai, T. Tanaka, T. Usui, M. Matsumoto, K. Sekiguchi, and M. Miyasaka A high endothelial venule secretory protein, mac25/angiomodulin, interacts with multiple high endothelial venule-associated molecules including chemokines J. Immunol. 171 2003 553 561 (Pubitemid 36871361)
17. W.M. Gommans, N.E. Tatalias, C.P. Sie, D. Dupuis, N. Vendetti, L. Smith, R. Kaushal, and S. Maas Screening of human SNP database identifies recoding sites of A-to-I RNA editing RNA 14 2008 2074 2085
18. E.Y. Levanon, M. Hallegger, Y. Kinar, R. Shemesh, K. Djinovic-Carugo, G. Rechavi, M.F. Jantsch, and E. Eisenberg Evolutionarily conserved human targets of adenosine to inosine RNA editing Nucleic Acids Res. 33 2005 1162 1168 (Pubitemid 41439909)
19. S. Ahmed, K. Yamamoto, Y. Sato, T. Ogawa, A. Herrmann, S. Higashi, and K. Miyazaki Proteolytic processing of IGFBP-related protein-1 (TAF/angiomodulin/ mac25) modulates its biological activity Biochem. Biophys. Res. Commun. 310 2003 612 618 (Pubitemid 37163708)
20. S. Ahmed, X. Jin, M. Yagi, C. Yasuda, Y. Sato, S. Higashi, C.Y. Lin, R.B. Dickson, and K. Miyazaki Identification of membrane-bound serine proteinase matriptase as processing enzyme of insulin-like growth factor binding protein-related protein-1 (IGFBP-rP1/angiomodulin/mac25) FEBS J. 273 2006 615 627
21. T. He, Q. Wang, G. Feng, Y. Hu, L. Wang, and Y. Wang Computational detection and functional analysis of human tissue-specific A-to-I RNA editing PLoS ONE 6 2011 e18129
22. J.B. Li, E.Y. Levanon, J.K. Yoon, J. Aach, B. Xie, E. Leproust, K. Zhang, Y. Gao, and G.M. Church Genome-wide identification of human RNA editing sites by parallel DNA capturing and sequencing Science 324 2009 1210 1213
23. M. Enstero, C. Daniel, H. Wahlstedt, F. Major, and M. Ohman Recognition and coupling of A-to-I edited sites are determined by the tertiary structure of the RNA Nucleic Acids Res. 37 2009 6916 6926
24. T. Yamauchi, F. Umeda, M. Masakado, M. Isaji, S. Mizushima, and H. Nawata Purification and molecular cloning of prostacyclin-stimulating factor from serum-free conditioned medium of human diploid fibroblast cells Biochem. J. 303 Pt 2 1994 591 598 (Pubitemid 24317344)
25. K. Akaogi, Y. Okabe, J. Sato, Y. Nagashima, H. Yasumitsu, K. Sugahara, and K. Miyazaki Specific accumulation of tumor-derived adhesion factor in tumor blood vessels and in capillary tube-like structures of cultured vascular endothelial cells Proc. Natl. Acad. Sci. U S A 93 1996 8384 8389 (Pubitemid 26269567)
26. D. Thierry-Mieg, and J. Thierry-Mieg AceView: a comprehensive cDNA-supported gene and transcripts annotation Genome Biol. 7 Suppl 1 2006 S12.1 S12.14
27. W. Kalus, M. Zweckstetter, C. Renner, Y. Sanchez, J. Georgescu, M. Grol, D. Demuth, R. Schumacher, C. Dony, K. Lang, and T.A. Holak Structure of the IGF-binding domain of the insulin-like growth factor-binding protein-5 (IGFBP-5): implications for IGF and IGF-I receptor interactions EMBO J. 17 1998 6558 6572 (Pubitemid 28521791)
28. W. Zeslawski, H.G. Beisel, M. Kamionka, W. Kalus, R.A. Engh, R. Huber, K. Lang, and T.A. Holak The interaction of insulin-like growth factor-I with the N-terminal domain of IGFBP-5 EMBO J. 20 2001 3638 3644 (Pubitemid 32691775)
29. K. Fredrick, and M. Ibba How the sequence of a gene can tune its translation Cell 141 2010 227 229
30. J. Sato, S. Hasegawa, K. Akaogi, H. Yasumitsu, S. Yamada, K. Sugahara, and K. Miyazaki Identification of cell-binding site of angiomodulin (AGM/TAF/Mac25) that interacts with heparan sulfates on cell surface J. Cell. Biochem. 75 1999 187 195 (Pubitemid 29463487)
31. M. Zuker Mfold web server for nucleic acid folding and hybridization prediction Nucleic Acids Res. 31 2003 3406 3415 (Pubitemid 37442169)
32. UniProt Consortium Reorganizing the protein space at the Universal Protein Resource (UniProt) Nucleic Acids Res. 40 2012 D71 D75
33. T. Takeuchi, J.L. Harris, W. Huang, K.W. Yan, S.R. Coughlin, and C.S. Craik Cellular localization of membrane-type serine protease 1 and identification of protease-activated receptor-2 and single-chain urokinase-type plasminogen activator as substrates J. Biol. Chem. 275 2000 26333 26342