Rnase footprinting of protein binding sites on an mRNA target of small RNAs

Methods in Molecular Biology

Volumn 905, Issue , 2012, Pages 213-224

  Peng, Yi ^a   Soper, Toby J ^a   Woodson, Sarah A ^a  

^a JOHNS HOPKINS UNIVERSITY   (United States)

Author keywords

Footprinting; Primer extension; RNA; RNA protein interactions; RNase T2; Sequencing gel

Indexed keywords

BACTERIAL PROTEIN; BACTERIAL RNA; HOST FACTOR 1; MESSENGER RNA; PRIMER DNA; RIBONUCLEASE; RIBONUCLEASE T(2); SIGMA FACTOR; SIGMA FACTOR KATF PROTEIN, BACTERIA; SMALL UNTRANSLATED RNA;

ARTICLE; BINDING SITE; BIOSYNTHESIS; GENETICS; METABOLISM; METHODOLOGY; PROTEIN FOOTPRINTING; SEQUENCE ANALYSIS;

BACTERIAL PROTEINS; BINDING SITES; DNA PRIMERS; ENDORIBONUCLEASES; HOST FACTOR 1 PROTEIN; PROTEIN FOOTPRINTING; RNA, BACTERIAL; RNA, MESSENGER; RNA, SMALL UNTRANSLATED; SEQUENCE ANALYSIS; SIGMA FACTOR;

EID: 84864151688     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-61779-949-5_13     Document Type: Article

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