메뉴 건너뛰기




Volumn 39, Issue 12, 2011, Pages 5193-5202

Rapid binding and release of Hfq from ternary complexes during RNA annealing

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; PROTEIN HFQ; TRANSFER RNA; UNCLASSIFIED DRUG;

EID: 79958095005     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkr062     Document Type: Article
Times cited : (59)

References (36)
  • 1
    • 77955155869 scopus 로고    scopus 로고
    • Base pairing small RNAs and their roles in global regulatory networks
    • Beisel, C.L. and Storz, G. (2010) Base pairing small RNAs and their roles in global regulatory networks. FEMS Microbiol. Rev., 34, 866-882.
    • (2010) FEMS Microbiol. Rev. , vol.34 , pp. 866-882
    • Beisel, C.L.1    Storz, G.2
  • 2
    • 67349192582 scopus 로고    scopus 로고
    • Multiple target regulation by small noncoding RNAs rewires gene expression at the post-transcriptional level
    • Papenfort, K. and Vogel, J. (2009) Multiple target regulation by small noncoding RNAs rewires gene expression at the post-transcriptional level. Res. Microbiol., 160, 278-287.
    • (2009) Res. Microbiol. , vol.160 , pp. 278-287
    • Papenfort, K.1    Vogel, J.2
  • 5
    • 33750043437 scopus 로고    scopus 로고
    • Translation initiation and the fate of bacterial mRNAs
    • DOI 10.1111/j.1574-6976.2006.00043.x
    • Kaberdin, V.R. and Blasi, U. (2006) Translation initiation and the fate of bacterial mRNAs. FEMS Microbiol. Rev., 30, 967-979. (Pubitemid 44583798)
    • (2006) FEMS Microbiology Reviews , vol.30 , Issue.6 , pp. 967-979
    • Kaberdin, V.R.1    Blasi, U.2
  • 6
    • 77953753696 scopus 로고    scopus 로고
    • Small RNA-mediated regulation at the level of transcript stability
    • Caron, M.P., Lafontaine, D.A. and Masse, E. (2010) Small RNA-mediated regulation at the level of transcript stability. RNA Biol., 7, 140-144.
    • (2010) RNA Biol. , vol.7 , pp. 140-144
    • Caron, M.P.1    Lafontaine, D.A.2    Masse, E.3
  • 7
    • 34247158257 scopus 로고    scopus 로고
    • Mechanism of RNA silencing by Hfq-binding small RNAs
    • DOI 10.1016/j.mib.2007.03.010, PII S1369527407000276, Cell Regulation (RNA Special Issue)
    • Aiba, H. (2007) Mechanism of RNA silencing by Hfq-binding small RNAs. Curr. Opin. Microbiol., 10, 134-139. (Pubitemid 46590050)
    • (2007) Current Opinion in Microbiology , vol.10 , Issue.2 , pp. 134-139
    • Aiba, H.1
  • 8
    • 1842453716 scopus 로고    scopus 로고
    • Controlling mRNA stability and translation with small, noncoding RNAs
    • DOI 10.1016/j.mib.2004.02.015, PII S1369527404000281
    • Storz, G., Opdyke, J.A. and Zhang, A. (2004) Controlling mRNA stability and translation with small, noncoding RNAs. Curr. Opin. Microbiol., 7, 140-144. (Pubitemid 38447046)
    • (2004) Current Opinion in Microbiology , vol.7 , Issue.2 , pp. 140-144
    • Storz, G.1    Opdyke, J.A.2    Zhang, A.3
  • 9
    • 4344682527 scopus 로고    scopus 로고
    • The small RNA regulators of Escherichia coli: Roles and mechanisms
    • DOI 10.1146/annurev.micro.58.030603.123841
    • Gottesman, S. (2004) The small RNA regulators of Escherichia coli: roles and mechanisms*. Annu. Rev. Microbiol., 58, 303-328. (Pubitemid 39551989)
    • (2004) Annual Review of Microbiology , vol.58 , pp. 303-328
    • Gottesman, S.1
  • 10
    • 34247109118 scopus 로고    scopus 로고
    • Hfq structure, function and ligand binding
    • DOI 10.1016/j.mib.2007.03.015, PII S1369527407000331, Cell Regulation (RNA Special Issue)
    • Brennan, R.G. and Link, T.M. (2007) Hfq structure, function and ligand binding. Curr. Opin. Microbiol., 10, 125-133. (Pubitemid 46590055)
    • (2007) Current Opinion in Microbiology , vol.10 , Issue.2 , pp. 125-133
    • Brennan, R.G.1    Link, T.M.2
  • 11
    • 0036163624 scopus 로고    scopus 로고
    • The Sm-like Hfq protein increases OxyS RNA interaction with target mRNAs
    • DOI 10.1016/S1097-2765(01)00437-3
    • Zhang, A., Wassarman, K.M., Ortega, J., Steven, A.C. and Storz, G. (2002) The Sm-like Hfq Protein Increases OxyS RNA Interaction with Target mRNAs. Mol. Cell, 9, 11-22. (Pubitemid 34127767)
    • (2002) Molecular Cell , vol.9 , Issue.1 , pp. 11-22
    • Zhang, A.1    Wassarman, K.M.2    Ortega, J.3    Steven, A.C.4    Storz, G.5
  • 12
    • 0017227834 scopus 로고
    • Site-specific interaction of Qbeta host factor and ribosomal protein S1 with Qbeta and R17 bacteriophage RNAs
    • Senear, A.W. and Steitz, J.A. (1976) Site-specific interaction of Qbeta host factor and ribosomal protein S1 with Qbeta and R17 bacteriophage RNAs. J. Biol. Chem., 251, 1902-1912.
    • (1976) J. Biol. Chem. , vol.251 , pp. 1902-1912
    • Senear, A.W.1    Steitz, J.A.2
  • 13
    • 0036645689 scopus 로고    scopus 로고
    • Structures of the pleiotropic translational regulator Hfq and an Hfq-RNA complex: A bacterial Sm-like protein
    • DOI 10.1093/emboj/cdf322
    • Schumacher, M.A., Pearson, R.F., Moller, T., Valentin-Hansen, P. and Brennan, R.G. (2002) Structures of the pleiotropic translational regulator Hfq and an Hfq-RNA complex: a bacterial Sm-like protein. EMBO J., 21, 3546-3556. (Pubitemid 34760584)
    • (2002) EMBO Journal , vol.21 , Issue.13 , pp. 3546-3556
    • Schumacher, M.A.1    Pearson, R.F.2    Moller, T.3    Valentin-Hansen, P.4    Brennan, R.G.5
  • 14
    • 0019254853 scopus 로고
    • Interaction of Escherichia coli host factor protein with oligoriboadenylates
    • DOI 10.1021/bi00567a029
    • de Haseth, P.L. and Uhlenbeck, O.C. (1980) Interaction of Escherichia coli host factor protein with oligoriboadenylates. Biochemistry, 19, 6138-6146. (Pubitemid 11134695)
    • (1980) Biochemistry , vol.19 , Issue.26 , pp. 6138-6146
    • De Haseth, P.L.1    Uhlenbeck, O.C.2
  • 17
    • 72049095718 scopus 로고    scopus 로고
    • Structure of Escherichia coli Hfq bound to polyriboadenylate RNA
    • Link, T.M., Valentin-Hansen, P. and Brennan, R.G. (2009) Structure of Escherichia coli Hfq bound to polyriboadenylate RNA. Proc. Natl Acad. Sci. USA, 106, 19292-19297.
    • (2009) Proc. Natl Acad. Sci. USA , vol.106 , pp. 19292-19297
    • Link, T.M.1    Valentin-Hansen, P.2    Brennan, R.G.3
  • 21
    • 0037276123 scopus 로고    scopus 로고
    • Identification of the Hfq-binding site on DsrA RNA: Hfq binds without altering DsrA secondary structure
    • DOI 10.1261/rna.2570803
    • Brescia, C.C., Mikulecky, P.J., Feig, A.L. and Sledjeski, D.D. (2003) Identification of the Hfq-binding site on DsrA RNA: Hfq binds without altering DsrA secondary structure. RNA, 9, 33-43. (Pubitemid 36206300)
    • (2003) RNA , vol.9 , Issue.1 , pp. 33-43
    • Brescia, C.C.1    Mikulecky, P.J.2    Feig, A.L.3    Sledjeski, D.D.4
  • 22
    • 50649097486 scopus 로고    scopus 로고
    • The rpoS mRNA leader recruits Hfq to facilitate annealing with DsrA sRNA
    • Soper, T.J. and Woodson, S.A. (2008) The rpoS mRNA leader recruits Hfq to facilitate annealing with DsrA sRNA. RNA, 14, 1907-1917.
    • (2008) RNA , vol.14 , pp. 1907-1917
    • Soper, T.J.1    Woodson, S.A.2
  • 24
    • 77958563236 scopus 로고    scopus 로고
    • An upstream Hfq binding site in the fhlA mRNA leader region facilitates the OxyS-fhlA interaction
    • Salim, N.N. and Feig, A.L. (2010) An upstream Hfq binding site in the fhlA mRNA leader region facilitates the OxyS-fhlA interaction. PLoS ONE, 5, e13028.
    • (2010) PLoS ONE , vol.5
    • Salim, N.N.1    Feig, A.L.2
  • 25
    • 70350699443 scopus 로고    scopus 로고
    • Effect of salt and RNA structure on annealing and strand displacement by Hfq
    • Hopkins, J.F., Panja, S., McNeil, S.A. and Woodson, S.A. (2009) Effect of salt and RNA structure on annealing and strand displacement by Hfq. Nucleic Acids Res., 37, 6205-6213.
    • (2009) Nucleic Acids Res. , vol.37 , pp. 6205-6213
    • Hopkins, J.F.1    Panja, S.2    McNeil, S.A.3    Woodson, S.A.4
  • 26
    • 36249019206 scopus 로고    scopus 로고
    • Dissecting RNA chaperone activity
    • DOI 10.1261/rna.671807
    • Rajkowitsch, L. and Schroeder, R. (2007) Dissecting RNA chaperone activity. RNA, 13, 2053-2060. (Pubitemid 350127547)
    • (2007) RNA , vol.13 , Issue.12 , pp. 2053-2060
    • Rajkowitsch, L.1    Schroeder, R.2
  • 27
    • 9244253711 scopus 로고    scopus 로고
    • Cycling of the Sm-like protein Hfq on the DsrA small regulatory RNA
    • DOI 10.1016/j.jmb.2004.10.006, PII S0022283604012872
    • Lease, R.A. and Woodson, S.A. (2004) Cycling of the Sm-like protein Hfq on the DsrA small regulatory RNA. J. Mol. Biol., 344, 1211-1223. (Pubitemid 39550474)
    • (2004) Journal of Molecular Biology , vol.344 , Issue.5 , pp. 1211-1223
    • Lease, R.A.1    Woodson, S.A.2
  • 28
    • 77955663530 scopus 로고    scopus 로고
    • E. coli DNA associated with isolated Hfq interacts with Hfq's distal surface and C-terminal domain
    • Updegrove, T.B., Correia, J.J., Galletto, R., Bujalowski, W. and Wartell, R.M. (2010) E. coli DNA associated with isolated Hfq interacts with Hfq's distal surface and C-terminal domain. Biochim. Biophys. Acta, 1799, 588-596.
    • (2010) Biochim. Biophys. Acta , vol.1799 , pp. 588-596
    • Updegrove, T.B.1    Correia, J.J.2    Galletto, R.3    Bujalowski, W.4    Wartell, R.M.5
  • 32
    • 78751677070 scopus 로고    scopus 로고
    • Taming free energy landscapes with RNA chaperones
    • Woodson, S.A. (2010) Taming free energy landscapes with RNA chaperones. RNA Biol., 7, 1-10.
    • (2010) RNA Biol. , vol.7 , pp. 1-10
    • Woodson, S.A.1
  • 33
    • 0037367939 scopus 로고    scopus 로고
    • RNA chaperone activity of the Sm-like Hfq protein
    • DOI 10.1038/sj.embor.embor772
    • Moll, I., Leitsch, D., Steinhauser, T. and Blasi, U. (2003) RNA chaperone activity of the Sm-like Hfq protein. EMBO Rep., 4, 284-289. (Pubitemid 36511725)
    • (2003) EMBO Reports , vol.4 , Issue.3 , pp. 284-289
    • Moll, I.1    Leitsch, D.2    Steinhauser, T.3    Blasi, U.4
  • 34
    • 1542320707 scopus 로고    scopus 로고
    • Hfq, a new chaperoning role: Binding to messenger RNA determines access for small RNA regulator
    • DOI 10.1038/sj.emboj.7600058
    • Geissmann, T.A. and Touati, D. (2004) Hfq, a new chaperoning role: binding to messenger RNA determines access for small RNA regulator. EMBO J., 23, 396-405. (Pubitemid 38294504)
    • (2004) EMBO Journal , vol.23 , Issue.2 , pp. 396-405
    • Geissmann, T.A.1    Touati, D.2
  • 35
    • 33847363604 scopus 로고    scopus 로고
    • Spectroscopic observation of RNA chaperone activities of Hfq in post-transcriptional regulation by a small non-coding RNA
    • DOI 10.1093/nar/gkl1124
    • Arluison, V., Hohng, S., Roy, R., Pellegrini, O., Regnier, P. and Ha, T. (2007) Spectroscopic observation of RNA chaperone activities of Hfq in post-transcriptional regulation by a small non-coding RNA. Nucleic Acids Res., 35, 999-1006. (Pubitemid 46344724)
    • (2007) Nucleic Acids Research , vol.35 , Issue.3 , pp. 999-1006
    • Arluison, V.1    Hohng, S.2    Roy, R.3    Pellegrini, O.4    Regnier, P.5    Ha, T.6
  • 36
    • 0347519274 scopus 로고    scopus 로고
    • The poly(A) binding protein Hfq protects RNA from RNase E and exoribonucleolytic degradation
    • DOI 10.1093/nar/gkg915
    • Folichon, M., Arluison, V., Pellegrini, O., Huntzinger, E., Regnier, P. and Hajnsdorf, E. (2003) The poly(A) binding protein Hfq protects RNA from RNase E and exoribonucleolytic degradation. Nucleic Acids Res., 31, 7302-7310. (Pubitemid 38008458)
    • (2003) Nucleic Acids Research , vol.31 , Issue.24 , pp. 7302-7310
    • Folichon, M.1    Arluison, V.2    Pellegrini, O.3    Huntzinger, E.4    Regnier, P.5    Hajnsdorf, E.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.