Multi-parametric relationships between PAM measurements and carbon incorporation, an in situ approach

PLoS ONE

Volumn 7, Issue 7, 2012, Pages

  Napoléon, Camille ^a,b,c   Claquin, Pascal ^a,b  

^a UNIVERSITÉ DE CAEN   (France)

^b INSTITUT DE RECHERCHE POUR LE DÉVELOPPEMENT   (France)

^c IFREMER   (France)

Author keywords

[No Author keywords available]

Indexed keywords

CARBON 13;

AMPLITUDE MODULATION; ARTICLE; CARBON FIXATION; ELECTRON TRANSPORT; FLUOROMETRY; LIGHT INTENSITY; LIGHT IRRADIANCE; MATHEMATICAL COMPUTING; MATHEMATICAL MODEL; NUTRIENT CONCENTRATION; PARAMETRIC TEST; PHOTOINHIBITION; PHYSICAL CHEMISTRY; PHYTOPLANKTON; TRANSPORT KINETICS;

CARBON; CARBON ISOTOPES; CLUSTER ANALYSIS; ELECTRIC CONDUCTIVITY; ELECTRONS; FLUOROMETRY; GEOGRAPHY;

EID: 84864100099     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0040284     Document Type: Article

References (53)

1. Pauly D, Christensen V, (1995) Primary production required to sustain global fisheries. Nature 374: 255-257.
2. Cloern JE, (1996) Phytoplankton bloom dynamics in coastal ecosystems: A review with some general lessons from sustained investigation of San Francisco Bay, California. Reviews of Geophysics 34: 127-168.
3. Pannard A, Claquin P, Klein C, Le Roy B, Veron B, (2008) Short-term variability of the phytoplankton community in coastal ecosystem in response to physical and chemical conditions' changes. Estuarine Coastal and Shelf Science 80: 212-224.
4. Gaxiola-Castro G, Alvarez-Borrego S, Lavin MF, Zirino A, Najera-Martinez S, (1999) Spatial variability of the photosynthetic parameters and biomass of the Gulf of California phytoplankton. Journal of Plankton Research 21: 231-245.
5. Platt T, Sathyendranath S, Forget MH, White GN, Caverhill C, et al. (2008) Operational estimation of primary production at large geographical scales. Remote Sensing of Environment 112: 3437-3448.
6. Tan SC, Shi GY, (2009) Spatiotemporal variability of satellite-derived primary production in the South China Sea, 1998-2006. Journal of Geophysical Research-Biogeosciences 114.
7. Grangeré K, Lefebvre S, Menesguen A, Jouenne F, (2009) On the interest of using field primary production data to calibrate phytoplankton rate processes in ecosystem models. Estuarine Coastal and Shelf Science 81: 169-178.
8. Babin M, Morel A, Gagnon R, (1994) An incubator designed for extensive and sensitive measurements pf phytoplankton photosynthetic parameters. Limnology and Oceanography 39: 694-702.
9. Savidge G, Boyd P, Pomroy A, Harbour D, Joint I, (1995) Phytoplankton production and biomass estimates in the northeast Atlantic-ocean, May to June 1990. Deep-Sea Research Part I-Oceanographic Research Papers 42: 599-617.
10. Kromkamp JC, Forster RM, (2003) The use of variable fluorescence measurements in aquatic ecosystems: differences between multiple and single turnover measuring protocols and suggested terminology. European Journal of Phycology 38: 103-112.
11. Parkhill JP, Maillet G, Cullen JJ, (2001) Fluorescence-based maximal quantum yield for PSII as a diagnostic of nutrient stress. Journal of Phycology 37: 517-529.
12. Barranguet C, Kromkamp J, (2000) Estimating primary production rates from photosynthetic electron transport in estuarine microphytobenthos. Marine Ecology Progress Series 204: 39-52.
13. Kolber Z, Falkowski PG, (1993) Use of active fluorescence to estimate phytoplankton photosynthesis in-situ. Limnology and Oceanography 38: 1646-1665.
14. Hancke K, Hancke TB, Olsen LM, Johnsen G, Glud RN, (2008) Temperature effects on microalgal photosynthesis-light responses measured by O-2 production, pulse-amplitude-modulated fluorescence, and C-14 assimilation. Journal of Phycology 44: 501-514.
15. Marchetti A, Sherry ND, Juneau P, Strzepek RF, Harrison PJ, (2006) Phytoplankton processes during a mesoscale iron enrichment in the NE subarctic Pacific: Part III- Primary productivity. Deep-Sea Research Part Ii-Topical Studies in Oceanography 53: 2131-2151.
16. Babin M, Morel A, Claustre H, Bricaud A, Kolber Z, et al. (1996) Nitrogen- and irradiance-dependent variations of the maximum quantum yield of carbon fixation in eutrophic, mesotrophic and oligotrophic marine systems. Deep-Sea Research Part I-Oceanographic Research Papers 43: 1241-1272.
17. Morris EP, Kromkamp JC, (2003) Influence of temperature on the relationship between oxygen- and fluorescence-based estimates of photosynthetic parameters in a marine benthic diatom (Cylindrotheca closterium). European Journal of Phycology 38: 133-142.
18. Claquin P, Kromkamp JC, Martin-Jezequel V, (2004) Relationship between photosynthetic metabolism and cell cycle in a synchronized culture of the marine alga Cylindrotheca fusiformis (Bacillariophyceae). European Journal of Phycology 39: 33-41.
19. Flameling IA, Kromkamp J, (1998) Light dependence of quantum yields for PSII charge separation and oxygen evolution in eucaryotic algae. Limnology and Oceanography 43: 284-297.
20. Behrenfeld MJ, Prasil O, Babin M, Bruyant F, (2004) In search of a physiological basis for covariations in light-limited and light-saturated photosynthesis. Journal of Phycology 40: 4-25.
21. Hartig P, Wolfstein K, Lippemeier S, Colijn F, (1998) Photosynthetic activity of natural microphytobenthos population measured by fluorescence (PAM) and 14C-tracer methods: a comparison. Marine Ecology Progress Series 166: 53-62.
22. Lefebvre S, Mouget JL, Loret P, Rosa P, Tremblin G, (2007) Comparison between fluorimetry and oximetry techniques to measure photosynthesis in the diatom Skeletonema costatum cultivated under simulated seasonal conditions. Journal of Photochemistry and Photobiology pp. 131-139.
23. Napoleon C, Raimbault V, Fiant L, Riou P, Lefebvre S, et al. (2012) Spatiotemporal dynamics of physicochemical and photosynthetic parameters in the central English Channel. Journal of Sea Research. 69: 43-52.
24. Aminot A, Kérouel R, (2007) Dosage automatique des nutriments dans les eaux marines. Versailles: Quae. 188 p.
25. Aminot A, Chaussepied M, (1983) Manuel des analyses chimiques en milieu marin. Brest: CNEXO. 395 p.
26. Welschmeyer NA, (1994) Fluorometric analysis of chlorophyll-a in the presence of chlorophyll-b and pheopigments. Limnology and Oceanography 39: 1985-1992.
27. Babin M, Therriault JC, Legendre L, Condal A, (1993) Variations in the specific absorption-coefficient for natural phytoplankton assemblages- Impact on estimates of primary production. Limnology and Oceanography 38: 154-177.
28. Babin M, Stramski D, Ferrari GM, Claustre H, Bricaud A, et al. (2003) Variations in the light absorption coefficients of phytoplankton, nonalgal particles, and dissolved organic matter in coastal waters around Europe. Journal of Geophysical Research-Oceans 108.
29. Johnsen G, Sakshaug E, (2007) Biooptical characteristics of PSII and PSI in 33 species (13 pigment groups) of marine phytoplankton, and the relevance for pulse-amplitude-modulated and fast-repetition-rate fluorometry. Journal of Phycology 43: 1236-1251.
30. Nelson NB, Prezelin BB, Bidigare RR, (1993) Pphytoplankton light absorption and the package effect in california coastal waters. Marine Ecology-Progress Series 94: 217-227.
31. Schreiber U, Schliwa U, Bilger W, (1986) Continuous recording of photochemical and nonphotochemical chlorophyll fluorescence quenching with a new type of modulation fluorometer. Photosynthesis Research 10: 51-62.
32. Genty B, Briantais JM, Baker NR, (1989) The relationship between the quantum yield of photosynthetic electron transport and of quenching chlorophyll fluorescence. Biochimica Et Biophysica Acta 990: 87-92.
33. Juneau P, Harrison PJ, (2005) Comparison by PAM fluorometry of photosynthetic activity of nine marine phytoplankton grown under identical conditions. Photochemistry and Photobiology 81: 649-653.
34. Hama T, Miyazaki T, Ogawa Y, Iwakuma T, Takahashi M, et al. (1983) Measurement of photosynthetic production of a marine phytoplankton population using a stable C-13 isotope. Marine Biology 73: 31-36.
35. Eilers PHC, Peeters JCH, (1988) A model for the relationship between light-intensity and the rate of photosynthesis in phytoplankton. Ecological Modelling 42: 199-215.
36. Geel C, Versluis W, Snel JFH, (1997) Estimation of oxygen evolution by marine phytoplankton from measurement of the efficiency of Photosystem II electron flow. Photosynthesis Research 51: 61-70.
37. Masojidek J, Grobbelaar JU, Pechar L, KobliZek M, (2001) Photosystem II Electron Transport Rates and Oxygen Production in Natural Waterblooms of Freshwater Cyanobacteria During a Diel Cycle. J Plankton Res 23: 57-66.
38. Schaeffer BA, Kamykowski D, McKay L, Sinclair G, Milligan EJ, (2007) A comparison of photoresponse among ten different Karenia brevis (Dinophyceae) isolates. Journal of Phycology 43: 702-714.
39. Wilhelm C, Buechel C, Fisahn J, Goss R, Jakob T, et al. (2006) The regulation of carbon and nutrient assimilation in diatoms is significantly different from green algae. Protist 157: 91-124.
40. Birmingham BC, Coleman JR, Colman B, (1982) Measurement of photorespiration in algae. Plant Physiology 69: 259-262.
41. Burns BD, Beardall J, (1987) Utilization of inorganic carbon by marine microalgae. Journal of Experimental Marine Biology and Ecology 107: 75-86.
42. Raven JA, Kubler JE, Beardall J, (2000) Put out the light, and then put out the light. Journal of the Marine Biological Association of the United Kingdom 80: 1-25.
43. Lomas MW, Glibert PM, (1999) Temperature regulation of nitrate uptake: A novel hypothesis about nitrate uptake and reduction in cool-water diatoms. Limnology and Oceanography 44: 556-572.
44. Peltier G, Thibault P, (1985) O2 uptake in the light in Chlamydomonas. Plant Physiology 79: 225-230.
45. Xue XP, Gauthier DA, Turpin DH, Weger HG, (1996) Interactions between photosynthesis and respiration in the green alga Chlamydomonas reinhardtii- Characterization of light-enhanced dark respiration. Plant Physiology 112: 1005-1014.
46. Falkowski PG, Dubinsky Z, Santostefano G, (1985) Light-enhanced dark respiration in phytoplankton. Verhandlungen Internationale Vereinigung Limnologie 22: 2830-2833.
47. Lippemeier S, Hartig P, Colijn F, (1999) Direct impact of silicate on the photosynthetic performance of the diatom Thalassiosira weissflogii assessed by on- and off-line PAM fluorescence measurements. Journal of Plankton Research 21: 269-283.
48. Reynolds C, (2006) The ecology of phytoplankton. Cambridge: Cambridge University Press. 535 p.
49. Prezelin BB, Samuelsson G, Matlick HA, (1986) Photosystem II photoinhibition and altered kinetics of photosynthesis during nutrient-dependent highlight photoadaptation in Gonyaulax Polyedra. Marine Biology 93: 1-12.
50. Kolber Z, Zehr J, Falkowski PG, (1988) Effects of growth irradiance and nitrogen limitation on photosynthetic energy conversion in photosystem II. Plant Physiology 88: 923-929.
51. Claquin P, Longphuirt SN, Fouillaron P, Huonnic P, Ragueneau O, et al. (2010) Effects of simulated benthic fluxes on phytoplankton dynamic and photosynthetic parameters in a mesocosm experiment (Bay of Brest, France). Estuarine Coastal and Shelf Science 86: 93-101.
52. Falkowski PG, Raven JA, (2007) Aquatic Photosynthesis. Princeton: Princeton University Press.
53. Jouenne F, Lefebvre S, Veron B, Lagadeuc Y, (2007) Phytoplankton community structure and primary production in small intertidal estuarine-bay ecosystem (eastern English Channel, France). Marine Biology 151: 805-825.