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Volumn 7358 LNCS, Issue , 2012, Pages 686-692

BMA: Visual tool for modeling and analyzing biological networks

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL NETWORKS; VISUAL TOOLS;

EID: 84864053615     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-642-31424-7_50     Document Type: Conference Paper
Times cited : (30)

References (20)
  • 1
    • 38649108502 scopus 로고    scopus 로고
    • GemCell: A generic platform for modeling multi-cellular biological systems
    • Amir-Kroll, H., Sadot, A., Cohen, I., Harel, D.: GemCell: A generic platform for modeling multi-cellular biological systems. TCS 391(3) (2008)
    • (2008) TCS , vol.391 , Issue.3
    • Amir-Kroll, H.1    Sadot, A.2    Cohen, I.3    Harel, D.4
  • 2
    • 84881147036 scopus 로고    scopus 로고
    • Mechanistic insights into metabolic disturbance during type-2 diabetes and obesity using qualitative networks
    • Beyer, A., Thomason, P., Li, X., Scott, J., Fisher, J.: Mechanistic insights into metabolic disturbance during type-2 diabetes and obesity using qualitative networks. TCSB 12 (2010)
    • (2010) TCSB , pp. 12
    • Beyer, A.1    Thomason, P.2    Li, X.3    Scott, J.4    Fisher, J.5
  • 3
    • 79251538979 scopus 로고    scopus 로고
    • Proving Stabilization of Biological Systems
    • Jhala, R., Schmidt, D. (eds.) VMCAI 2011. Springer, Heidelberg
    • Cook, B., Fisher, J., Krepska, E., Piterman, N.: Proving Stabilization of Biological Systems. In: Jhala, R., Schmidt, D. (eds.) VMCAI 2011. LNCS, vol. 6538, pp. 134-149. Springer, Heidelberg (2011)
    • (2011) LNCS , vol.6538 , pp. 134-149
    • Cook, B.1    Fisher, J.2    Krepska, E.3    Piterman, N.4
  • 5
    • 0242574975 scopus 로고    scopus 로고
    • Toward rigorous comprehension of biological complexity: Modeling, execution, and visualization of thymic T-cell maturation
    • Efroni, S., Harel, D., Cohen, I.R.: Toward rigorous comprehension of biological complexity: modeling, execution, and visualization of thymic T-cell maturation. Genome Res. 13(11) (2003)
    • (2003) Genome Res. , vol.13 , Issue.11
    • Efroni, S.1    Harel, D.2    Cohen, I.R.3
  • 6
    • 13844266999 scopus 로고    scopus 로고
    • A formal language for computational systems biology
    • Errampalli, D.D., Priami, C., Quaglia, P.: A formal language for computational systems biology. Omics 8(4) (2004)
    • (2004) Omics , vol.8 , Issue.4
    • Errampalli, D.D.1    Priami, C.2    Quaglia, P.3
  • 7
    • 34249725570 scopus 로고    scopus 로고
    • Predictive modeling of signaling crosstalk during c. elegans development
    • Fisher, J., Piterman, N., Hajnal, A., Henzinger, T.: Predictive modeling of signaling crosstalk during c. elegans development. PLoS Comp. Bio. 3(5) (2007)
    • (2007) PLoS Comp. Bio. , vol.3 , Issue.5
    • Fisher, J.1    Piterman, N.2    Hajnal, A.3    Henzinger, T.4
  • 8
    • 35248832573 scopus 로고    scopus 로고
    • Automated Symbolic Reachability Analysis; with Application to Delta-Notch Signaling Automata
    • Maler, O., Pnueli, A. (eds.) HSCC 2003. Springer, Heidelberg
    • Ghosh, R., Tiwari, A., Tomlin, C.: Automated Symbolic Reachability Analysis; with Application to Delta-Notch Signaling Automata. In: Maler, O., Pnueli, A. (eds.) HSCC 2003. LNCS, vol. 2623, pp. 233-248. Springer, Heidelberg (2003)
    • (2003) LNCS , vol.2623 , pp. 233-248
    • Ghosh, R.1    Tiwari, A.2    Tomlin, C.3
  • 9
    • 33845224003 scopus 로고    scopus 로고
    • Probabilistic Model Checking of Complex Biological Pathways
    • Priami, C. (ed.) CMSB 2006. Springer, Heidelberg
    • Heath, J., Kwiatkowska, M., Norman, G., Parker, D., Tymchyshyn, O.: Probabilistic Model Checking of Complex Biological Pathways. In: Priami, C. (ed.) CMSB 2006. LNCS (LNBI), vol. 4210, pp. 32-47. Springer, Heidelberg (2006)
    • (2006) LNCS (LNBI) , vol.4210 , pp. 32-47
    • Heath, J.1    Kwiatkowska, M.2    Norman, G.3    Parker, D.4    Tymchyshyn, O.5
  • 11
    • 70349783801 scopus 로고    scopus 로고
    • Protein kinase vrk-1 regulates cell invasion and egl-17/fgf signaling in C. elegans
    • Klerkx, E., Alarcón, P., Waters, K., Reinke, V., Sternberg, P., Askjaer, P.: Protein kinase vrk-1 regulates cell invasion and egl-17/fgf signaling in C. elegans. Dev. Bio. 335(1) (2009)
    • (2009) Dev. Bio. , vol.335 , Issue.1
    • Klerkx, E.1    Alarcón, P.2    Waters, K.3    Reinke, V.4    Sternberg, P.5    Askjaer, P.6
  • 12
    • 0142042996 scopus 로고    scopus 로고
    • BioSPICE: A computational infrastructure for integrative biology
    • Kumar, S., Feidler, J.: BioSPICE: A computational infrastructure for integrative biology. OMICS 7(3), 225 (2003)
    • (2003) OMICS , vol.7 , Issue.3 , pp. 225
    • Kumar, S.1    Feidler, J.2
  • 13
    • 67651062669 scopus 로고    scopus 로고
    • Simulation-based model checking approach to cell fate specification during C. elegans vulval development by hybrid functional petri net with extension
    • Li, C., Nagasaki, M., Ueno, K., Miyano, S.: Simulation-based model checking approach to cell fate specification during C. elegans vulval development by hybrid functional petri net with extension. BMC Sys. Bio. 3(42) (2009)
    • (2009) BMC Sys. Bio. , vol.3 , Issue.42
    • Li, C.1    Nagasaki, M.2    Ueno, K.3    Miyano, S.4
  • 14
    • 0041381349 scopus 로고    scopus 로고
    • Segmenting the fly embryo: A logical analysis fo the pairrule cross-regulatory module
    • Sanchez, L., Thieffry, D.: Segmenting the fly embryo: a logical analysis fo the pairrule cross-regulatory module. J. of Theo. Bio. 244 (2003)
    • (2003) J. of Theo. Bio. , pp. 244
    • Sanchez, L.1    Thieffry, D.2
  • 15
    • 34948874342 scopus 로고    scopus 로고
    • Qualitative networks: A symbolic approach to analyze biological signaling networks
    • Schaub, M., Henzinger, T., Fisher, J.: Qualitative networks: A symbolic approach to analyze biological signaling networks. BMC Sys. Bio. 1(4) (2007)
    • (2007) BMC Sys. Bio. , vol.1 , Issue.4
    • Schaub, M.1    Henzinger, T.2    Fisher, J.3
  • 16
    • 23944506654 scopus 로고    scopus 로고
    • The love-hate relationship between Ras and Notch
    • Sundaram, M.V.: The love-hate relationship between Ras and Notch. Genes Dev. 19(16) (2005)
    • (2005) Genes Dev. , vol.19 , Issue.16
    • Sundaram, M.V.1
  • 17
    • 0029267491 scopus 로고
    • Dynamical behaviour of biological regulatory networks - I. biological role of feedback loops and practical use of the concept of the loop-characteristic state
    • Thomas, R., Thieffry, D., Kaufman, M.: Dynamical behaviour of biological regulatory networks - i. biological role of feedback loops and practical use of the concept of the loop-characteristic state. Bull. of Math. Bio. 55(2) (1995)
    • (1995) Bull. of Math. Bio. , vol.55 , Issue.2
    • Thomas, R.1    Thieffry, D.2    Kaufman, M.3
  • 18
    • 74549191284 scopus 로고    scopus 로고
    • Computational modeling of the egfr network elucidates control mechanisms regulating signal dynamics
    • Wang, D., Cardelli, L., Phillips, A., Piterman, N., Fisher, J.: Computational modeling of the egfr network elucidates control mechanisms regulating signal dynamics. BMC Sys. Bio. 3(1), 118 (2009)
    • (2009) BMC Sys. Bio. , vol.3 , Issue.1 , pp. 118
    • Wang, D.1    Cardelli, L.2    Phillips, A.3    Piterman, N.4    Fisher, J.5
  • 19
    • 0442272485 scopus 로고    scopus 로고
    • Crosstalk between the EGFR and LIN-12/Notch pathways in C. elegans vulval development
    • Yoo, A.S., Bais, C., Greenwald, I.: Crosstalk between the EGFR and LIN-12/Notch pathways in C. elegans vulval development. Science 303(5658) (2004)
    • Science , vol.303 , Issue.5658 , pp. 2004
    • Yoo, A.S.1    Bais, C.2    Greenwald, I.3
  • 20
    • 0004300788 scopus 로고
    • The Stable state of organisms in thermodynamic bases of biological processes
    • Zotin, A.: The Stable state of organisms in thermodynamic bases of biological processes: Physiological Reactions and Adaptations (1990)
    • (1990) Physiological Reactions and Adaptations
    • Zotin, A.1


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