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Volumn 358-359, Issue , 2012, Pages 139-145

Genetic diversity and structure within and between wild and cultivated Saccharina japonica (Laminariales, Phaeophyta) revealed by SSR markers

Author keywords

Domestication; Genetic diversity; Genetic structure; Saccharina japonica; Simple sequence repeat marker

Indexed keywords

BROWN ALGA; CULTIVAR; CULTIVATION; DOMESTICATION; GENETIC MARKER; GENETIC STRUCTURE; GENETIC VARIATION; GERMPLASM; SPOROPHYTE; WILD POPULATION;

EID: 84864047188     PISSN: 00448486     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.aquaculture.2012.06.022     Document Type: Article
Times cited : (50)

References (53)
  • 1
    • 39049101951 scopus 로고    scopus 로고
    • The genus Laminaria sensu lato: recent insights and developments
    • Bartsch I., Wiencke C., Bischof K., et al. The genus Laminaria sensu lato: recent insights and developments. European Journal of Phycology 2008, 43:1-86.
    • (2008) European Journal of Phycology , vol.43 , pp. 1-86
    • Bartsch, I.1    Wiencke, C.2    Bischof, K.3
  • 3
    • 80051674621 scopus 로고    scopus 로고
    • Genetic variation of Laminaria japonica (Phaeophyta) populations in China as revealed by RAPD markers
    • Bi Y.H., Hu Y.J., Zhou Z.G. Genetic variation of Laminaria japonica (Phaeophyta) populations in China as revealed by RAPD markers. Acta Oceanologica Sinica 2011, 30:103-112.
    • (2011) Acta Oceanologica Sinica , vol.30 , pp. 103-112
    • Bi, Y.H.1    Hu, Y.J.2    Zhou, Z.G.3
  • 4
    • 0032401888 scopus 로고    scopus 로고
    • Isolation and characterization of microsatellite markers in nuclear genome of the brown alga Laminaria digitata (Phaeophyceae)
    • Billot C., Rousvoal S., Estoup A., et al. Isolation and characterization of microsatellite markers in nuclear genome of the brown alga Laminaria digitata (Phaeophyceae). Molecular Ecology 1998, 7:1771-1788.
    • (1998) Molecular Ecology , vol.7 , pp. 1771-1788
    • Billot, C.1    Rousvoal, S.2    Estoup, A.3
  • 5
    • 0033027245 scopus 로고    scopus 로고
    • Development of RAPD markers for parentage analysis in Laminaria digitata
    • Billot C., Boury S., Benet H., et al. Development of RAPD markers for parentage analysis in Laminaria digitata. Botanica Marina 1999, 42:307-314.
    • (1999) Botanica Marina , vol.42 , pp. 307-314
    • Billot, C.1    Boury, S.2    Benet, H.3
  • 6
    • 0037701875 scopus 로고    scopus 로고
    • Current patterns, habitat discontinuities and population genetic structure, the case of the kelp Laminaria digitata in the English Channel
    • Billot C., Enge C.R., Rousvoal S., et al. Current patterns, habitat discontinuities and population genetic structure, the case of the kelp Laminaria digitata in the English Channel. Marine Ecology Progress Series 2003, 253:111-121.
    • (2003) Marine Ecology Progress Series , vol.253 , pp. 111-121
    • Billot, C.1    Enge, C.R.2    Rousvoal, S.3
  • 7
    • 0030756391 scopus 로고    scopus 로고
    • Genetic variability and spatial separation in the sea palm kelp Postelsia palmaeformis (Phaeophyceae) as assessed with M13 fingerprints and RAPDs
    • Coyer J.A., Olsen J.L., Stam T.W. Genetic variability and spatial separation in the sea palm kelp Postelsia palmaeformis (Phaeophyceae) as assessed with M13 fingerprints and RAPDs. Journal of Phycology 1997, 33:561-568.
    • (1997) Journal of Phycology , vol.33 , pp. 561-568
    • Coyer, J.A.1    Olsen, J.L.2    Stam, T.W.3
  • 8
    • 0000598635 scopus 로고
    • Dispersion, dispersal, and persistence of the annual intertidal alga, Postelsia palmaeformis Ruprecht
    • Dayton P.K. Dispersion, dispersal, and persistence of the annual intertidal alga, Postelsia palmaeformis Ruprecht. Ecology 1973, 54:433-438.
    • (1973) Ecology , vol.54 , pp. 433-438
    • Dayton, P.K.1
  • 9
    • 33845618112 scopus 로고    scopus 로고
    • The molecular genetics of crop domestication
    • Doebley J.F., Gaut B.S., Smith B.D. The molecular genetics of crop domestication. Cell 2006, 127:1309-1321.
    • (2006) Cell , vol.127 , pp. 1309-1321
    • Doebley, J.F.1    Gaut, B.S.2    Smith, B.D.3
  • 10
    • 21244479740 scopus 로고    scopus 로고
    • Detecting the number of clusters of individuals using the software Structure, a simulation study
    • Evanno G., Regnaut S., Goudet J. Detecting the number of clusters of individuals using the software Structure, a simulation study. Molecular Ecology 2005, 14:2611-2620.
    • (2005) Molecular Ecology , vol.14 , pp. 2611-2620
    • Evanno, G.1    Regnaut, S.2    Goudet, J.3
  • 11
    • 85007110786 scopus 로고    scopus 로고
    • Arlequin (version 3.0), an integrated software package for population genetics data analysis
    • Excoffier L., Laval G., Schneider S. Arlequin (version 3.0), an integrated software package for population genetics data analysis. Evolutionary Bioinformatics 2005, 1:47-50.
    • (2005) Evolutionary Bioinformatics , vol.1 , pp. 47-50
    • Excoffier, L.1    Laval, G.2    Schneider, S.3
  • 12
    • 0041817568 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data, linked loci and correlated allele frequencies
    • Falush D., Stephens M., Pritchard J.K. Inference of population structure using multilocus genotype data, linked loci and correlated allele frequencies. Genetics 2003, 164:1567-1587.
    • (2003) Genetics , vol.164 , pp. 1567-1587
    • Falush, D.1    Stephens, M.2    Pritchard, J.K.3
  • 13
    • 33044484426 scopus 로고
    • The breeding of a new breed of Haidai (Laminaria japonica Aresch.) and its preliminary genetic analysis
    • (in Chinese with English abstract)
    • Fang T.C., Wu C.Y., Jiang Y., et al. The breeding of a new breed of Haidai (Laminaria japonica Aresch.) and its preliminary genetic analysis. Acta Botanica Sinica 1962, 10:197-209. (in Chinese with English abstract).
    • (1962) Acta Botanica Sinica , vol.10 , pp. 197-209
    • Fang, T.C.1    Wu, C.Y.2    Jiang, Y.3
  • 14
    • 1842497330 scopus 로고
    • Breeding of the new variety "Danhai No. 1" of Laminaria japonica by using a female haploid clone of the kelp
    • ( in Chinese with English abstract)
    • Fang T.C., Cui J.J., Qu Y.L., et al. Breeding of the new variety "Danhai No. 1" of Laminaria japonica by using a female haploid clone of the kelp. Journal of Shandong College of Oceanology 1983, 13:63-70. ( in Chinese with English abstract).
    • (1983) Journal of Shandong College of Oceanology , vol.13 , pp. 63-70
    • Fang, T.C.1    Cui, J.J.2    Qu, Y.L.3
  • 15
    • 77956463857 scopus 로고    scopus 로고
    • Genetic perspectives on crop domestication
    • Gross B.L., Kenneth M.O. Genetic perspectives on crop domestication. Trends in Plant Science 2010, 15:529-537.
    • (2010) Trends in Plant Science , vol.15 , pp. 529-537
    • Gross, B.L.1    Kenneth, M.O.2
  • 17
    • 0034068754 scopus 로고    scopus 로고
    • Variability over space and time in the genetic structure of the winged kelp Alaria marginata
    • Kusumo H.T., Druehl L.D. Variability over space and time in the genetic structure of the winged kelp Alaria marginata. Marine Biology 2000, 136:397-409.
    • (2000) Marine Biology , vol.136 , pp. 397-409
    • Kusumo, H.T.1    Druehl, L.D.2
  • 19
    • 34147100568 scopus 로고    scopus 로고
    • Trait evaluation and trial cultivation of Dongfang No. 2, the hybrid of a male gametophyte clone of Laminaria longissima (Laminarales, Phaeophyta) and a female one of L. japonica
    • Li X.J., Cong Y.Z., Yang G.P., et al. Trait evaluation and trial cultivation of Dongfang No. 2, the hybrid of a male gametophyte clone of Laminaria longissima (Laminarales, Phaeophyta) and a female one of L. japonica. Journal of Applied Phycology 2007, 19:139-151.
    • (2007) Journal of Applied Phycology , vol.19 , pp. 139-151
    • Li, X.J.1    Cong, Y.Z.2    Yang, G.P.3
  • 20
    • 33847774633 scopus 로고    scopus 로고
    • Genetic mapping of Laminaria japonica and L. longissima using amplified fragment length polymorphism markers in a "two-way pseudo-testcross" strategy
    • Li Y.H., Yang Y.X., Liu J.D., et al. Genetic mapping of Laminaria japonica and L. longissima using amplified fragment length polymorphism markers in a "two-way pseudo-testcross" strategy. Journal of Integrative Plant Biology 2007, 49:392-400.
    • (2007) Journal of Integrative Plant Biology , vol.49 , pp. 392-400
    • Li, Y.H.1    Yang, Y.X.2    Liu, J.D.3
  • 21
    • 47249133687 scopus 로고    scopus 로고
    • Breeding and trial cultivation of Dongfang No. 3, a hybrid of Laminaria gametophyte clones with a more than intraspecific but less than interspecific relationship
    • Li X.J., Liu J.L., Cong Y.Z., et al. Breeding and trial cultivation of Dongfang No. 3, a hybrid of Laminaria gametophyte clones with a more than intraspecific but less than interspecific relationship. Aquaculture 2008, 280:76-80.
    • (2008) Aquaculture , vol.280 , pp. 76-80
    • Li, X.J.1    Liu, J.L.2    Cong, Y.Z.3
  • 22
    • 70350144791 scopus 로고    scopus 로고
    • Genetic mapping of the Laminaria japonica (Laminariales, Phaeophyta) using amplified fragment length polymorphism markers
    • Liu F.L., Wang X.L., Liu J.D., et al. Genetic mapping of the Laminaria japonica (Laminariales, Phaeophyta) using amplified fragment length polymorphism markers. Journal of Phycology 2009, 45:1228-1233.
    • (2009) Journal of Phycology , vol.45 , pp. 1228-1233
    • Liu, F.L.1    Wang, X.L.2    Liu, J.D.3
  • 23
    • 77349106683 scopus 로고    scopus 로고
    • Development of expressed sequence tag-derived microsatellite markers for Laminaria japonica Aresch
    • Liu F.L., Wang X.L., Yao J.T., et al. Development of expressed sequence tag-derived microsatellite markers for Laminaria japonica Aresch. Journal of Applied Phycology 2009, 22:109-111.
    • (2009) Journal of Applied Phycology , vol.22 , pp. 109-111
    • Liu, F.L.1    Wang, X.L.2    Yao, J.T.3
  • 24
    • 77954957711 scopus 로고    scopus 로고
    • QTL mapping for frond length and width in Laminaria japonica Aresch (Laminariales, Phaeophyta) using AFLP and SSR markers
    • Liu F.L., Shao Z.R., Zhang H.N., et al. QTL mapping for frond length and width in Laminaria japonica Aresch (Laminariales, Phaeophyta) using AFLP and SSR markers. Marine Biotechnology 2010, 12:386-394.
    • (2010) Marine Biotechnology , vol.12 , pp. 386-394
    • Liu, F.L.1    Shao, Z.R.2    Zhang, H.N.3
  • 25
    • 0014054519 scopus 로고
    • The detection of disease clustering and a generalized regression approach
    • Mantel N. The detection of disease clustering and a generalized regression approach. Cancer Research 1967, 27:209-220.
    • (1967) Cancer Research , vol.27 , pp. 209-220
    • Mantel, N.1
  • 26
    • 0001667186 scopus 로고
    • The taxonomic implications of genetic and environmentally induced variations in seaweed morphology
    • Mathieson A.C., Norton T.A., Neushul M. The taxonomic implications of genetic and environmentally induced variations in seaweed morphology. Botanical Review 1981, 47:313-347.
    • (1981) Botanical Review , vol.47 , pp. 313-347
    • Mathieson, A.C.1    Norton, T.A.2    Neushul, M.3
  • 28
    • 0018147653 scopus 로고
    • Estimation of average heterozygosity and genetic distance from a small number of individuals
    • Nei M. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 1978, 89:583-590.
    • (1978) Genetics , vol.89 , pp. 583-590
    • Nei, M.1
  • 30
    • 33846664485 scopus 로고    scopus 로고
    • Temperature tolerance of young sporophytes from two populations of Laminaria japonica revealed by chlorophyll fluorescence measurements and short-term growth and survival performances in tank culture
    • Pang S.J., Jin Z.H., Sun J.Z., et al. Temperature tolerance of young sporophytes from two populations of Laminaria japonica revealed by chlorophyll fluorescence measurements and short-term growth and survival performances in tank culture. Aquaculture 2007, 262:493-503.
    • (2007) Aquaculture , vol.262 , pp. 493-503
    • Pang, S.J.1    Jin, Z.H.2    Sun, J.Z.3
  • 31
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard J.K., Stephens M., Donnelly P. Inference of population structure using multilocus genotype data. Genetics 2000, 155:945-959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 32
    • 0027036748 scopus 로고
    • Dispersal in kelps, factors affecting spore swimming and competency
    • Reed D.C., Amslerm C.D., Ebeling A.W. Dispersal in kelps, factors affecting spore swimming and competency. Ecology 1992, 73:1577-1583.
    • (1992) Ecology , vol.73 , pp. 1577-1583
    • Reed, D.C.1    Amslerm, C.D.2    Ebeling, A.W.3
  • 33
    • 0005093312 scopus 로고
    • Variation and natural selection in marine macroalgae
    • Russell G. Variation and natural selection in marine macroalgae. Oceanogr. Mar. Biol. Ann. Rev. 1986, 24:309-377.
    • (1986) Oceanogr. Mar. Biol. Ann. Rev. , vol.24 , pp. 309-377
    • Russell, G.1
  • 34
    • 79951550731 scopus 로고    scopus 로고
    • An AFLP-based survey of genetic diversity and relationships of major farmed cultivars and geographically isolated wild populations of Saccharina japonica (Phaeophyta) along the northwest coasts of the Pacific
    • Shan T.F., Pang S.J., Zhang Y.R., et al. An AFLP-based survey of genetic diversity and relationships of major farmed cultivars and geographically isolated wild populations of Saccharina japonica (Phaeophyta) along the northwest coasts of the Pacific. Journal of Applied Phycology 2011, 23:35-45.
    • (2011) Journal of Applied Phycology , vol.23 , pp. 35-45
    • Shan, T.F.1    Pang, S.J.2    Zhang, Y.R.3
  • 35
    • 34447125737 scopus 로고    scopus 로고
    • Development of 18 polymorphic microsatellite DNA markers of Laminaria japonica (Phaeophyceae)
    • Shi Y.Y., Yang G.P., Liu Y.J. Development of 18 polymorphic microsatellite DNA markers of Laminaria japonica (Phaeophyceae). Molecular Ecology Notes 2007, 7:620-622.
    • (2007) Molecular Ecology Notes , vol.7 , pp. 620-622
    • Shi, Y.Y.1    Yang, G.P.2    Liu, Y.J.3
  • 36
    • 0030880972 scopus 로고    scopus 로고
    • Seed banks and molecular maps, unlocking genetic potential from the wild
    • Tanksley S.D., McCouch R. Seed banks and molecular maps, unlocking genetic potential from the wild. Science 1997, 277:1063-1066.
    • (1997) Science , vol.277 , pp. 1063-1066
    • Tanksley, S.D.1    McCouch, R.2
  • 37
    • 34147181448 scopus 로고
    • Report of the breeding of a novel kelp variety, "Zaohoucheng No. 1"
    • (in Chinese with English abstract)
    • Tian Z., Yuan B. Report of the breeding of a novel kelp variety, "Zaohoucheng No. 1". Mariculture 1989, 1:7-17. (in Chinese with English abstract).
    • (1989) Mariculture , vol.1 , pp. 7-17
    • Tian, Z.1    Yuan, B.2
  • 39
    • 0002836065 scopus 로고
    • Commercial cultivation
    • Blackwell Scientic Publications, Oxford, C.S. Lobban, M.J. Wynne (Eds.)
    • Tseng C.K. Commercial cultivation. Botanical Monographs 17, the Biology of Seaweeds 1981, 680-725. Blackwell Scientic Publications, Oxford. C.S. Lobban, M.J. Wynne (Eds.).
    • (1981) Botanical Monographs 17, the Biology of Seaweeds , pp. 680-725
    • Tseng, C.K.1
  • 40
    • 0034826014 scopus 로고    scopus 로고
    • Algal biotechnology industries and research activities in China
    • Tseng C.K. Algal biotechnology industries and research activities in China. Journal of Applied Phycology 2001, 13:375-380.
    • (2001) Journal of Applied Phycology , vol.13 , pp. 375-380
    • Tseng, C.K.1
  • 41
    • 33044483431 scopus 로고    scopus 로고
    • Comparison of genetic diversity in Laminaria japonica gametophytes
    • (in Chinese with English abstract)
    • Wang Y., Dai J.X. Comparison of genetic diversity in Laminaria japonica gametophytes. Chinese Biodiversity 1999, 7:197-201. (in Chinese with English abstract).
    • (1999) Chinese Biodiversity , vol.7 , pp. 197-201
    • Wang, Y.1    Dai, J.X.2
  • 42
    • 4344648324 scopus 로고    scopus 로고
    • DNA fingerprinting of selected Laminaria (Phaeophta) gametophytes by RAPD markers
    • Wang X.L., Yang Y.X., Cong Y.Z., et al. DNA fingerprinting of selected Laminaria (Phaeophta) gametophytes by RAPD markers. Aquaculture 2004, 238:143-153.
    • (2004) Aquaculture , vol.238 , pp. 143-153
    • Wang, X.L.1    Yang, Y.X.2    Cong, Y.Z.3
  • 43
    • 24944585425 scopus 로고    scopus 로고
    • Assessment of genetic diversities of selected Laminaria (Laminarales, Phaeophta) gametophytes by inter-simple sequence repeat analysis
    • Wang X.L., Liu C.L., Li X.J., et al. Assessment of genetic diversities of selected Laminaria (Laminarales, Phaeophta) gametophytes by inter-simple sequence repeat analysis. Journal of Integrative Plant Biology 2005, 47:753-758.
    • (2005) Journal of Integrative Plant Biology , vol.47 , pp. 753-758
    • Wang, X.L.1    Liu, C.L.2    Li, X.J.3
  • 44
    • 0000862605 scopus 로고
    • The interpretation of population structure by F-statistics with special regard to systems of mating
    • Wright S. The interpretation of population structure by F-statistics with special regard to systems of mating. Evolution 1965, 19:395-420.
    • (1965) Evolution , vol.19 , pp. 395-420
    • Wright, S.1
  • 45
    • 0004973136 scopus 로고
    • Progress in the genetics and breeding of economic seaweeds in China
    • Wu C.Y., Lin G.H. Progress in the genetics and breeding of economic seaweeds in China. Hydrobiologia 1987, 151(152):57-61.
    • (1987) Hydrobiologia , vol.151 , Issue.152 , pp. 57-61
    • Wu, C.Y.1    Lin, G.H.2
  • 47
    • 69849091334 scopus 로고    scopus 로고
    • Construction and characterization of a tentative amplified fragment length polymorphism-simple sequence repeat linkage map of Laminaria (Laminariales, Phaeophyta)
    • Yang G.P., Sun Y., Shin Y.Y., et al. Construction and characterization of a tentative amplified fragment length polymorphism-simple sequence repeat linkage map of Laminaria (Laminariales, Phaeophyta). Journal of Phycology 2009, 45:873-878.
    • (2009) Journal of Phycology , vol.45 , pp. 873-878
    • Yang, G.P.1    Sun, Y.2    Shin, Y.Y.3
  • 49
    • 0011901808 scopus 로고    scopus 로고
    • Random amplified polymorphic DNA markers for three Japanese Laminaria species
    • Yotsukura N., Kawai T., Motomura T., et al. Random amplified polymorphic DNA markers for three Japanese Laminaria species. Fisheries Science 2001, 67:857-862.
    • (2001) Fisheries Science , vol.67 , pp. 857-862
    • Yotsukura, N.1    Kawai, T.2    Motomura, T.3
  • 50
    • 0032763555 scopus 로고    scopus 로고
    • World seaweed utilization: an end-of-century summary
    • Zemke-White W.L., Ohno M. World seaweed utilization: an end-of-century summary. Journal of Applied Phycology 1999, 11:369-376.
    • (1999) Journal of Applied Phycology , vol.11 , pp. 369-376
    • Zemke-White, W.L.1    Ohno, M.2
  • 51
    • 27744497739 scopus 로고    scopus 로고
    • Studies on rearing new variety of kelp "901"
    • (in Chinese with English abstract)
    • Zhang Q.S., Liu S.P., Qu S.C., et al. Studies on rearing new variety of kelp "901". Transactions of Oceanology and Limnology 2001, 2:46-53. (in Chinese with English abstract).
    • (2001) Transactions of Oceanology and Limnology , vol.2 , pp. 46-53
    • Zhang, Q.S.1    Liu, S.P.2    Qu, S.C.3
  • 52
    • 34548410466 scopus 로고    scopus 로고
    • Population genetic structure of Sargassum thunbergii (Fucales, Phaeophyta) detected by RAPD and ISSR markers
    • Zhao F.J., Wang X.L., Liu J.D., et al. Population genetic structure of Sargassum thunbergii (Fucales, Phaeophyta) detected by RAPD and ISSR markers. Journal of Applied Phycology 2007, 19:409-416.
    • (2007) Journal of Applied Phycology , vol.19 , pp. 409-416
    • Zhao, F.J.1    Wang, X.L.2    Liu, J.D.3
  • 53
    • 41049110047 scopus 로고    scopus 로고
    • Genetic structure analysis of natural Sargassum muticum (Fucales, Phaeophyta) populations using RAPD and ISSR markers
    • Zhao F.J., Liu F.L., Liu J.D., et al. Genetic structure analysis of natural Sargassum muticum (Fucales, Phaeophyta) populations using RAPD and ISSR markers. Journal of Applied Phycology 2008, 20:191-198.
    • (2008) Journal of Applied Phycology , vol.20 , pp. 191-198
    • Zhao, F.J.1    Liu, F.L.2    Liu, J.D.3


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