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Volumn 12, Issue 13, 2012, Pages 2139-2148

Quantitative proteomics of primary tumors with varying metastatic capabilities using stable isotope-labeled proteins of multiple histogenic origins

Author keywords

Biomarkers; Biomedicine; Cancer tissue; Mass spectrometry; Metastasis; Myosin 9

Indexed keywords

LACTATE DEHYDROGENASE; MYOSIN IIA; PROTEOME; STABLE ISOTOPE;

EID: 84864017230     PISSN: 16159853     EISSN: 16159861     Source Type: Journal    
DOI: 10.1002/pmic.201100490     Document Type: Article
Times cited : (22)

References (33)
  • 1
    • 77954730167 scopus 로고    scopus 로고
    • Plasma membrane proteomics and its application in clinical cancer biomarker discovery
    • Leth-Larsen, R., Lund, R. R., Ditzel, H. J., Plasma membrane proteomics and its application in clinical cancer biomarker discovery. Mol. Cell Proteomics 2010, 9, 1369-1382.
    • (2010) Mol. Cell Proteomics , vol.9 , pp. 1369-1382
    • Leth-Larsen, R.1    Lund, R.R.2    Ditzel, H.J.3
  • 3
    • 4944235277 scopus 로고    scopus 로고
    • Stable 'portrait' of breast tumors during progression: data from biology, pathology and genetics
    • Lacroix, M., Toillon, R. A., Leclercq, G., Stable 'portrait' of breast tumors during progression: data from biology, pathology and genetics. Endocr. Relat Cancer 2004, 11, 497-522.
    • (2004) Endocr. Relat Cancer , vol.11 , pp. 497-522
    • Lacroix, M.1    Toillon, R.A.2    Leclercq, G.3
  • 4
    • 63049090100 scopus 로고    scopus 로고
    • Metastasis: from dissemination to organ-specific colonization
    • Nguyen, D. X., Bos, P. D., Massague, J., Metastasis: from dissemination to organ-specific colonization. Nat. Rev. Cancer 2009, 9, 274-284.
    • (2009) Nat. Rev. Cancer , vol.9 , pp. 274-284
    • Nguyen, D.X.1    Bos, P.D.2    Massague, J.3
  • 5
    • 77952226764 scopus 로고    scopus 로고
    • Super-SILAC mix for quantitative proteomics of human tumor tissue
    • Geiger, T., Cox, J., Ostasiewicz, P., Wisniewski, J. R. et al., Super-SILAC mix for quantitative proteomics of human tumor tissue. Nat. Methods 2010, 7, 383-385.
    • (2010) Nat. Methods , vol.7 , pp. 383-385
    • Geiger, T.1    Cox, J.2    Ostasiewicz, P.3    Wisniewski, J.R.4
  • 6
    • 0036156751 scopus 로고    scopus 로고
    • Contrasting expression of thrombospondin-1 and osteopontin correlates with absence or presence of metastatic phenotype in an isogenic model of spontaneous human breast cancer metastasis
    • Urquidi, V., Sloan, D., Kawai, K., Agarwal, D. et al., Contrasting expression of thrombospondin-1 and osteopontin correlates with absence or presence of metastatic phenotype in an isogenic model of spontaneous human breast cancer metastasis. Clin. Cancer Res. 2002, 8, 61-74.
    • (2002) Clin. Cancer Res. , vol.8 , pp. 61-74
    • Urquidi, V.1    Sloan, D.2    Kawai, K.3    Agarwal, D.4
  • 7
    • 0141679385 scopus 로고    scopus 로고
    • Prolonged dormancy and site-specific growth potential of cancer cells spontaneously disseminated from nonmetastatic breast tumors as revealed by labeling with green fluorescent protein
    • Goodison, S., Kawai, K., Hihara, J., Jiang, P. et al., Prolonged dormancy and site-specific growth potential of cancer cells spontaneously disseminated from nonmetastatic breast tumors as revealed by labeling with green fluorescent protein. Clin. Cancer Res. 2003, 9, 3808-3814.
    • (2003) Clin. Cancer Res. , vol.9 , pp. 3808-3814
    • Goodison, S.1    Kawai, K.2    Hihara, J.3    Jiang, P.4
  • 8
    • 17844406154 scopus 로고    scopus 로고
    • Expression profiling of primary tumors and matched lymphatic and lung metastases in a xenogeneic breast cancer model
    • Montel, V., Huang, T. Y., Mose, E., Pestonjamasp, K. et al., Expression profiling of primary tumors and matched lymphatic and lung metastases in a xenogeneic breast cancer model. Am. J. Pathol. 2005, 166, 1565-1579.
    • (2005) Am. J. Pathol. , vol.166 , pp. 1565-1579
    • Montel, V.1    Huang, T.Y.2    Mose, E.3    Pestonjamasp, K.4
  • 9
    • 10044248882 scopus 로고    scopus 로고
    • Molecular cytogenetic analysis of a human breast metastasis model: identification of phenotype-specific chromosomal rearrangements
    • Goodison, S., Viars, C., Urquidi, V., Molecular cytogenetic analysis of a human breast metastasis model: identification of phenotype-specific chromosomal rearrangements. Cancer Genet. Cytogenet. 2005, 156, 37-48.
    • (2005) Cancer Genet. Cytogenet. , vol.156 , pp. 37-48
    • Goodison, S.1    Viars, C.2    Urquidi, V.3
  • 10
    • 33746620430 scopus 로고    scopus 로고
    • Dormant cancer cells retrieved from metastasis-free organs regain tumorigenic and metastatic potency
    • Suzuki, M., Mose, E. S., Montel, V., Tarin, D., Dormant cancer cells retrieved from metastasis-free organs regain tumorigenic and metastatic potency. Am. J. Pathol. 2006, 169, 673-681.
    • (2006) Am. J. Pathol. , vol.169 , pp. 673-681
    • Suzuki, M.1    Mose, E.S.2    Montel, V.3    Tarin, D.4
  • 11
    • 0034898489 scopus 로고    scopus 로고
    • Identification of metastasis-associated genes by transcriptional profiling of a pair of metastatic versus non-metastatic human mammary carcinoma cell lines
    • Schwirzke, M., Evtimova, V., Burtscher, H., Jarsch, M. et al., Identification of metastasis-associated genes by transcriptional profiling of a pair of metastatic versus non-metastatic human mammary carcinoma cell lines. Anticancer Res. 2001, 21, 1771-1776.
    • (2001) Anticancer Res. , vol.21 , pp. 1771-1776
    • Schwirzke, M.1    Evtimova, V.2    Burtscher, H.3    Jarsch, M.4
  • 12
    • 0036244390 scopus 로고    scopus 로고
    • Burtscher, H. , Identification of genes associated with metastasis of mammary carcinoma in metastatic versus non-metastatic cell lines
    • Euer, N., Schwirzke, M., Evtimova, V., Burtscher, H. et al., Identification of genes associated with metastasis of mammary carcinoma in metastatic versus non-metastatic cell lines. Anticancer Res. 2002, 22, 733-740.
    • (2002) Anticancer Res. , vol.22 , pp. 733-740
    • Euer, N.1    Schwirzke, M.2    Evtimova, V.3
  • 13
    • 22244443056 scopus 로고    scopus 로고
    • The RhoGAP protein DLC-1 functions as a metastasis suppressor in breast cancer cells
    • Goodison, S., Yuan, J., Sloan, D., Kim, R. et al., The RhoGAP protein DLC-1 functions as a metastasis suppressor in breast cancer cells. Cancer Res. 2005, 65, 6042-6053.
    • (2005) Cancer Res. , vol.65 , pp. 6042-6053
    • Goodison, S.1    Yuan, J.2    Sloan, D.3    Kim, R.4
  • 14
    • 67049098536 scopus 로고    scopus 로고
    • Efficient isolation and quantitative proteomic analysis of cancer cell plasma membrane proteins for identification of metastasis-associated cell surface markers
    • Lund, R., Leth-Larsen, R., Jensen, O. N., Ditzel, H. J., Efficient isolation and quantitative proteomic analysis of cancer cell plasma membrane proteins for identification of metastasis-associated cell surface markers. J. Proteome Res. 2009, 8, 3078-3090.
    • (2009) J. Proteome Res. , vol.8 , pp. 3078-3090
    • Lund, R.1    Leth-Larsen, R.2    Jensen, O.N.3    Ditzel, H.J.4
  • 15
    • 67049095042 scopus 로고    scopus 로고
    • Metastasis-related plasma membrane proteins of human breast cancer cells identified by comparative quantitative mass spectrometry
    • Leth-Larsen, R., Lund, R., Hansen, H. V., Laenkholm, A. V. et al., Metastasis-related plasma membrane proteins of human breast cancer cells identified by comparative quantitative mass spectrometry. Mol. Cell Proteomics 2009, 8, 1436-1449.
    • (2009) Mol. Cell Proteomics , vol.8 , pp. 1436-1449
    • Leth-Larsen, R.1    Lund, R.2    Hansen, H.V.3    Laenkholm, A.V.4
  • 16
    • 35948931395 scopus 로고    scopus 로고
    • Differential expression of ribosomal proteins in a human metastasis model identified by coupling 2-D liquid chromatography and mass spectrometry
    • Kreunin, P., Yoo, C., Urquidi, V., Lubman, D. M. et al., Differential expression of ribosomal proteins in a human metastasis model identified by coupling 2-D liquid chromatography and mass spectrometry. Cancer Genom. Proteomics 2007, 4, 329-339.
    • (2007) Cancer Genom. Proteomics , vol.4 , pp. 329-339
    • Kreunin, P.1    Yoo, C.2    Urquidi, V.3    Lubman, D.M.4
  • 17
    • 4444316787 scopus 로고    scopus 로고
    • Identification of metastasis-associated proteins in a human tumor metastasis model using the mass-mapping technique
    • Kreunin, P., Urquidi, V., Lubman, D. M., Goodison, S., Identification of metastasis-associated proteins in a human tumor metastasis model using the mass-mapping technique. Proteomics 2004, 4, 2754-2765.
    • (2004) Proteomics , vol.4 , pp. 2754-2765
    • Kreunin, P.1    Urquidi, V.2    Lubman, D.M.3    Goodison, S.4
  • 18
    • 33846647075 scopus 로고    scopus 로고
    • Proteomic profiling identifies breast tumor metastasis-associated factors in an isogenic model
    • Kreunin, P., Yoo, C., Urquidi, V., Lubman, D. M. et al., Proteomic profiling identifies breast tumor metastasis-associated factors in an isogenic model. Proteomics 2007, 7, 299-312.
    • (2007) Proteomics , vol.7 , pp. 299-312
    • Kreunin, P.1    Yoo, C.2    Urquidi, V.3    Lubman, D.M.4
  • 19
    • 33745221469 scopus 로고    scopus 로고
    • Tumor-stromal interactions reciprocally modulate gene expression patterns during carcinogenesis and metastasis
    • Montel, V., Mose, E. S., Tarin, D., Tumor-stromal interactions reciprocally modulate gene expression patterns during carcinogenesis and metastasis. Int. J. Cancer 2006, 119, 251-263.
    • (2006) Int. J. Cancer , vol.119 , pp. 251-263
    • Montel, V.1    Mose, E.S.2    Tarin, D.3
  • 20
    • 0037317228 scopus 로고    scopus 로고
    • Stop and go extraction tips for matrix-assisted laser desorption/ionization, nanoelectrospray, and LC/MS sample pretreatment in proteomics
    • Rappsilber, J., Ishihama, Y., Mann, M., Stop and go extraction tips for matrix-assisted laser desorption/ionization, nanoelectrospray, and LC/MS sample pretreatment in proteomics. Anal. Chem. 2003, 75, 663-670.
    • (2003) Anal. Chem. , vol.75 , pp. 663-670
    • Rappsilber, J.1    Ishihama, Y.2    Mann, M.3
  • 21
    • 20644464751 scopus 로고    scopus 로고
    • Serum protein profiling by miniaturized solid-phase extraction and matrix-assisted laser desorption/ionization mass spectrometry
    • Callesen, A. K., Mohammed, S., Bunkenborg, J., Kruse, T. A. et al., Serum protein profiling by miniaturized solid-phase extraction and matrix-assisted laser desorption/ionization mass spectrometry. Rapid Commun. Mass Spectrom 2005, 19, 1578-1586.
    • (2005) Rapid Commun. Mass Spectrom , vol.19 , pp. 1578-1586
    • Callesen, A.K.1    Mohammed, S.2    Bunkenborg, J.3    Kruse, T.A.4
  • 22
    • 34249807325 scopus 로고    scopus 로고
    • A mass spectrometry-friendly database for cSNP identification
    • Schandorff, S., Olsen, J. V., Bunkenborg, J., Blagoev, B. et al., A mass spectrometry-friendly database for cSNP identification. Nat. Methods 2007, 4, 465-466.
    • (2007) Nat. Methods , vol.4 , pp. 465-466
    • Schandorff, S.1    Olsen, J.V.2    Bunkenborg, J.3    Blagoev, B.4
  • 23
    • 0742305695 scopus 로고    scopus 로고
    • Intensity-based protein identification by machine learning from a library of tandem mass spectra
    • Elias, J. E., Gibbons, F. D., King, O. D., Roth, F. P. et al., Intensity-based protein identification by machine learning from a library of tandem mass spectra. Nat. Biotechnol. 2004, 22, 214-219.
    • (2004) Nat. Biotechnol. , vol.22 , pp. 214-219
    • Elias, J.E.1    Gibbons, F.D.2    King, O.D.3    Roth, F.P.4
  • 24
    • 73649131275 scopus 로고    scopus 로고
    • MSQuant, an open source platform for mass spectrometry-based quantitative proteomics
    • Mortensen, P., Gouw, J. W., Olsen, J. V., Ong, S. E. et al., MSQuant, an open source platform for mass spectrometry-based quantitative proteomics. J. Proteome Res. 2010, 9, 393-403.
    • (2010) J. Proteome Res. , vol.9 , pp. 393-403
    • Mortensen, P.1    Gouw, J.W.2    Olsen, J.V.3    Ong, S.E.4
  • 25
    • 49849084402 scopus 로고    scopus 로고
    • The influence of sample preparation and replicate analyses on HeLa cell phosphoproteome coverage
    • Ham, B. M., Yang, F., Jayachandran, H., Jaitly, N. et al., The influence of sample preparation and replicate analyses on HeLa cell phosphoproteome coverage. J. Proteome Res. 2008, 7, 2215-2221.
    • (2008) J. Proteome Res. , vol.7 , pp. 2215-2221
    • Ham, B.M.1    Yang, F.2    Jayachandran, H.3    Jaitly, N.4
  • 26
    • 36749068866 scopus 로고    scopus 로고
    • Proteomics analysis of conditioned media from three breast cancer cell lines: a mine for biomarkers and therapeutic targets
    • Kulasingam, V., Diamandis, E. P., Proteomics analysis of conditioned media from three breast cancer cell lines: a mine for biomarkers and therapeutic targets. Mol. Cell Proteomics 2007, 6, 1997-2011.
    • (2007) Mol. Cell Proteomics , vol.6 , pp. 1997-2011
    • Kulasingam, V.1    Diamandis, E.P.2
  • 28
    • 77953209898 scopus 로고    scopus 로고
    • Q&A: cancer clues from cell metabolism
    • Kaelin, W. G., Jr., Thompson, C. B., Q&A: cancer clues from cell metabolism. Nature 2010, 465, 562-564.
    • (2010) Nature , vol.465 , pp. 562-564
    • Kaelin Jr., W.G.1    Thompson, C.B.2
  • 29
  • 30
    • 34250869019 scopus 로고    scopus 로고
    • MDA-MB-435 cells are derived from M14 melanoma cells--a loss for breast cancer, but a boon for melanoma research
    • Rae, J., Creighton, C., Meck, J., Haddad, B. et al., MDA-MB-435 cells are derived from M14 melanoma cells--a loss for breast cancer, but a boon for melanoma research. Breast Cancer Res. Treatment 2007, 104, 13-19.
    • (2007) Breast Cancer Res. Treatment , vol.104 , pp. 13-19
    • Rae, J.1    Creighton, C.2    Meck, J.3    Haddad, B.4
  • 31
    • 67650456890 scopus 로고    scopus 로고
    • MDA-MB-435 and M14 cell lines: identical but not M14 melanoma?
    • Chambers, A. F., MDA-MB-435 and M14 cell lines: identical but not M14 melanoma? Cancer Res. 2009, 69, 5292-5293.
    • (2009) Cancer Res. , vol.69 , pp. 5292-5293
    • Chambers, A.F.1
  • 32
    • 2442701892 scopus 로고    scopus 로고
    • Lineage infidelity of MDA-MB-435 cells: expression of melanocyte proteins in a breast cancer cell line
    • Sellappan, S., Grijalva, R., Zhou, X., Yang, W. et al., Lineage infidelity of MDA-MB-435 cells: expression of melanocyte proteins in a breast cancer cell line. Cancer Res. 2004, 64, 3479-3485.
    • (2004) Cancer Res. , vol.64 , pp. 3479-3485
    • Sellappan, S.1    Grijalva, R.2    Zhou, X.3    Yang, W.4
  • 33
    • 70449523103 scopus 로고    scopus 로고
    • Expression of melanocyte-related genes in human breast cancer and its implications
    • Montel, V., Suzuki, M., Galloy, C., Mose, E. S. et al., Expression of melanocyte-related genes in human breast cancer and its implications. Differentiation 2009, 78, 283-291.
    • (2009) Differentiation , vol.78 , pp. 283-291
    • Montel, V.1    Suzuki, M.2    Galloy, C.3    Mose, E.S.4


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