-
1
-
-
15444357765
-
Characterization of the peptide binding motif of a rhesus MHC class I molecule (Mamu-a*01) that binds an immunodominant CTL epitope from simian immunodeficiency virus
-
Allen TM, Sidney J, del Guercio MF, Glickman RL, Lensmeyer GL, Wiebe DA, DeMars R, Pauza CD, Johnson RP, Sette A, Watkins DI (1998) Characterization of the peptide binding motif of a rhesus MHC class I molecule (Mamu-a*01) that binds an immu-nodominant CTL epitope from simian immunodeficiency virus. J Immunol 160:6062-6071 (Pubitemid 28298070)
-
(1998)
Journal of Immunology
, vol.160
, Issue.12
, pp. 6062-6071
-
-
Allen, T.M.1
Sidney, J.2
Del Guercio, M.-F.3
Glickman, R.L.4
Lensmeyer, G.L.5
Wiebe, D.A.6
DeMars, R.7
Pauza, C.D.8
Johnson, R.P.9
Sette, A.10
Watkins, D.I.11
-
2
-
-
0035164653
-
+ lymphocytes from simian immunodeficiency virus-infected rhesus macaques recognize 14 different epitopes bound by the major histocompatibility complex class I molecule Mamu-a*01: Implications for vaccine design and testing
-
DOI 10.1128/JVI.75.2.738-749.2001
-
Allen TM, Mothe BR, Sidney J, Jing P, Dzuris JL, Liebl ME, Vogel TU, O'Connor DH, Wang X, Wussow MC, Thomson JA, Altman JD, Watkins DI, Sette A (2001) CD8(+) lymphocytes from simian immunodeficiency virus-infected rhesus macaques recognize 14 different epitopes bound by the major histocompatibility complex class I molecule mamu-a*01: implications for vaccine design and testing. J Virol 75:738-749 (Pubitemid 32037277)
-
(2001)
Journal of Virology
, vol.75
, Issue.2
, pp. 738-749
-
-
Allen, T.M.1
Mothe, B.R.2
Sidney, J.3
Jing, P.4
Dzuris, J.L.5
Liebl, M.E.6
Vogel, T.U.7
O'Connor, D.H.8
Wang, X.9
Wussow, M.C.10
Thomson, J.A.11
Altman, J.D.12
Watkins, D.I.13
Sette, A.14
-
3
-
-
0033957834
-
The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000
-
Bairoch A, Apweiler R (2000) The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000. Nucleic Acids Res 28:45-48 (Pubitemid 30047711)
-
(2000)
Nucleic Acids Research
, vol.28
, Issue.1
, pp. 45-48
-
-
Bairoch, A.1
Apweiler, R.2
-
4
-
-
78149471646
-
Does cytolysis by cd8+ T cells drive immune escape in HIV infection?
-
Balamurali M, Petravic J, Loh L, Alcantara S, Kent SJ, Davenport MP (2010) Does cytolysis by CD8+ T cells drive immune escape in HIV infection? J Immunol 185:5093-5101
-
(2010)
J Immunol
, vol.185
, pp. 5093-5101
-
-
Balamurali, M.1
Petravic, J.2
Loh, L.3
Alcantara, S.4
Kent, S.J.5
Davenport, M.P.6
-
5
-
-
40549142407
-
Murine models for HIV vaccination and challenge
-
DOI 10.1586/14760584.7.1.117
-
Boberg A, Brave A, Johansson S, Wahren B, Hinkula J, Rollman E (2008) Murine models for HIV vaccination and challenge. Expert Rev Vaccines 7:117-130 (Pubitemid 351357969)
-
(2008)
Expert Review of Vaccines
, vol.7
, Issue.1
, pp. 117-130
-
-
Boberg, A.1
Brave, A.2
Johansson, S.3
Wahren, B.4
Hinkula, J.5
Rollman, E.6
-
6
-
-
0038581912
-
The Influence of HLA Genotype on AIDS
-
DOI 10.1146/annurev.med.54.101601.152346
-
Carrington M, O'Brien SJ (2003) The influence of HLA genotype on AIDS. Annu Rev Med 54:535-551 (Pubitemid 37386411)
-
(2003)
Annual Review of Medicine
, vol.54
, pp. 535-551
-
-
Carrington, M.1
O'Brien, S.J.2
-
7
-
-
59149088036
-
Safety, immunogenicity and efficacy of peptide-pulsed cellular immunotherapy in macaques
-
De Rose R, Mason RD, Loh L, Peut V, Smith MZ, Fernandez CS, Alcantara S, Amarasena T, Reece J, Seddiki N, Kelleher AD, Zaunders J, Kent SJ (2008) Safety, immunogenicity and efficacy of peptide-pulsed cellular immunotherapy in macaques. J Med Primatol 37(Suppl 2):69-78
-
(2008)
J Med Primatol
, vol.37
, Issue.SUPPL. 2
, pp. 69-78
-
-
De Rose, R.1
Mason, R.D.2
Loh, L.3
Peut, V.4
Smith, M.Z.5
Fernandez, C.S.6
Alcantara, S.7
Amarasena, T.8
Reece, J.9
Seddiki, N.10
Kelleher, A.D.11
Zaunders, J.12
Kent, S.J.13
-
8
-
-
48949120114
-
Macaque models of human infectious disease. ILAR j/natl res counc
-
Gardner MB, Luciw PA (2008) Macaque models of human infectious disease. ILAR J/Natl Res Counc, Inst Lab Anim Res 49:220-255
-
(2008)
Inst Lab Anim Res
, vol.49
, pp. 220-255
-
-
Gardner, M.B.1
Luciw, P.A.2
-
9
-
-
7044246160
-
Open mass spectrometry search algorithm
-
DOI 10.1021/pr0499491
-
Geer LY, Markey SP, Kowalak JA, Wagner L, Xu M, Maynard DM, Yang X, Shi W, Bryant SH (2004) Open mass spectrometry search algorithm. J Proteome Res 3:958-964 (Pubitemid 39425651)
-
(2004)
Journal of Proteome Research
, vol.3
, Issue.5
, pp. 958-964
-
-
Geer, L.Y.1
Markey, S.P.2
Kowalak, J.A.3
Wagner, L.4
Xu, M.5
Maynard, D.M.6
Yang, X.7
Shi, W.8
Bryant, S.H.9
-
10
-
-
63149135737
-
A macaque model of hiv-1 infection
-
Hatziioannou T, Ambrose Z, Chung NP, Piatak M Jr, Yuan F, Trubey CM, Coalter V, Kiser R, Schneider D, Smedley J, Pung R, Gathuka M, Estes JD, Veazey RS, KewalRamani VN, Lifson JD, Bieniasz PD (2009) A macaque model of HIV-1 infection. Proc Natl Acad Sci USA 106:4425-4429
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 4425-4429
-
-
Hatziioannou, T.1
Ambrose, Z.2
Chung, N.P.3
Piatak Jr., M.4
Yuan, F.5
Trubey, C.M.6
Coalter, V.7
Kiser, R.8
Schneider, D.9
Smedley, J.10
Pung, R.11
Gathuka, M.12
Estes, J.D.13
Veazey, R.S.14
Kewalramani, V.N.15
Lifson, J.D.16
Bieniasz, P.D.17
-
11
-
-
79960625207
-
Development of a pigtail macaque model of sexually transmitted infection/hiv coinfection using chlamydia trachomatis, trichomonas vaginalis, and SHIV (SF162P3)
-
Henning T, Fakile Y, Phillips C, Sweeney E, Mitchell J, Patton D, Sturdevant G, Caldwell HD, Secor WE, Papp J, Hendry RM, McNicholl J, Kersh E (2011) Development of a pigtail macaque model of sexually transmitted infection/HIV coinfection using Chlamydia trachomatis, Trichomonas vaginalis, and SHIV (SF162P3). J Med Primatol 40:214-223
-
(2011)
J Med Primatol
, vol.40
, pp. 214-223
-
-
Henning, T.1
Fakile, Y.2
Phillips, C.3
Sweeney, E.4
Mitchell, J.5
Patton, D.6
Sturdevant, G.7
Caldwell, H.D.8
Secor, W.E.9
Papp, J.10
Hendry, R.M.11
McNicholl, J.12
Kersh, E.13
-
12
-
-
21244495175
-
Rhesus macaque MHC class I molecules present HLA-B-like peptides
-
Hickman-Miller HD, Bardet W, Gilb A, Luis AD, Jackson KW, Watkins DI, HildebrandWH (2005) Rhesus macaque MHC class Imolecules present HLA-B-like peptides. J Immunol 175:367-375 (Pubitemid 40884340)
-
(2005)
Journal of Immunology
, vol.175
, Issue.1
, pp. 367-375
-
-
Hickman-Miller, H.D.1
Bardet, W.2
Gilb, A.3
Luis, A.D.4
Jackson, K.W.5
Watkins, D.I.6
Hildebrand, W.H.7
-
13
-
-
0028295047
-
Role of HLA-A motifs in identification of potential CTL epitopes in human papillomavirus type 16 E6 and E7 proteins
-
Kast WM, Brandt RM, Sidney J, Drijfhout JW, Kubo RT, Grey HM, Melief CJ, Sette A (1994) Role of HLA-A motifs in identification of potential CTL epitopes in human papillomavirus type 16 E6 and E7 proteins. J Immunol 152:3904-3912 (Pubitemid 24111062)
-
(1994)
Journal of Immunology
, vol.152
, Issue.8
, pp. 3904-3912
-
-
Kast, W.M.1
Brandt, R.M.P.2
Sidney, J.3
Drijfhout, J.-W.4
Kubo, R.T.5
Grey, H.M.6
Melief, C.J.M.7
Sette, A.8
-
14
-
-
78650637689
-
Genetic diversity of simian immunodeficiency virus encoding hiv-1 reverse transcriptase persists in macaques despite antiretroviral therapy
-
Kearney M, Spindler J, Shao W, Maldarelli F, Palmer S, Hu SL, Lifson JD, KewalRamani VN, Mellors JW, Coffin JM, Ambrose Z (2011) Genetic diversity of simian immunodeficiency virus encoding HIV-1 reverse transcriptase persists in macaques despite antiretroviral therapy. J Virol 85:1067-1076
-
(2011)
J Virol
, vol.85
, pp. 1067-1076
-
-
Kearney, M.1
Spindler, J.2
Shao, W.3
Maldarelli, F.4
Palmer, S.5
Hu, S.L.6
Lifson, J.D.7
Kewalramani, V.N.8
Mellors, J.W.9
Coffin, J.M.10
Ambrose, Z.11
-
15
-
-
84860573809
-
Dynamics of sivmac239 infection in pigtail macaques
-
Klatt NR, Canary LA, Vanderford TH, Vinton CL, Engram JC, Dunham RM, Cronise HE, Swerczek JM, Lafont BA, Picker LJ, Silvestri G, Brenchley JM (2011) Dynamics of SIVmac239 infection in pigtail macaques. J Virol
-
(2011)
J Virol
-
-
Klatt, N.R.1
Canary, L.A.2
Vanderford, T.H.3
Vinton, C.L.4
Engram, J.C.5
Dunham, R.M.6
Cronise, H.E.7
Swerczek, J.M.8
Lafont, B.A.9
Picker, L.J.10
Silvestri, G.11
Brenchley, J.M.12
-
16
-
-
0028208554
-
Definition of specific peptide motifs for four major HLA-A alleles
-
Kubo RT, Sette A, Grey HM, Appella E, Sakaguchi K, Zhu NZ, Arnott D, Sherman N, Shabanowitz J, Michel H et al (1994) Definition of specific peptide motifs for four major HLA-A alleles. J Immunol 152:3913-3924 (Pubitemid 24111063)
-
(1994)
Journal of Immunology
, vol.152
, Issue.8
, pp. 3913-3924
-
-
Kubo, R.T.1
Sette, A.2
Grey, H.M.3
Appella, E.4
Sakaguchi, K.5
Zhu, N.-Z.6
Arnott, D.7
Sherman, N.8
Shabanowitz, J.9
Michel, H.10
Bodnar, W.M.11
Davis, T.A.12
Hunt, D.F.13
-
17
-
-
0037768987
-
Characterization of pig-tailed macaque classical MHC class I genes: Implications for MHC evolution and antigen presentation in macaques
-
Lafont BA, Buckler-White A, Plishka R, Buckler C, Martin MA (2003) Characterization of pig-tailed macaque classical MHC class I genes: implications for MHC evolution and antigen presentation in macaques. J Immunol 171:875-885 (Pubitemid 36871400)
-
(2003)
Journal of Immunology
, vol.171
, Issue.2
, pp. 875-885
-
-
Lafont, B.A.P.1
Buckler-White, A.2
Plishka, R.3
Buckler, C.4
Martin, M.A.5
-
18
-
-
33846781214
-
The locus encoding an oligomorphic family of MHC-A alleles (Mane-A*06/Mamu-A*05) is present at high frequency in several macaque species
-
DOI 10.1007/s00251-007-0190-1
-
Lafont BA, McGraw CM, Stukes SA, Buckler-White A, Plishka RJ, Byrum RA, Hirsch VM, Martin MA (2007) The locus encoding an oligomorphic family of MHC-A alleles (Mane-A*06/Mamu-A*05) is present at high frequency in several macaque species. Immunogenetics 59:211-223 (Pubitemid 46215294)
-
(2007)
Immunogenetics
, vol.59
, Issue.3
, pp. 211-223
-
-
Lafont, B.A.P.1
McGraw, C.M.2
Stukes, S.A.3
Buckler-White, A.4
Plishka, R.J.5
Byrum, R.A.6
Hirsch, V.M.7
Martin, M.A.8
-
19
-
-
0012256376
-
Quantitative predictions of peptide binding to MHC class I molecules using specificity matrices and anchor-stratified calibrations
-
DOI 10.1034/j.1399-0039.2001.057005405.x
-
Lauemoller SL, Holm A, Hilden J, Brunak S, Holst Nissen M, Stryhn A, Ostergaard Pedersen L, Buus S (2001) Quantitative predictions of peptide binding to MHC class I molecules using specificity matrices and anchor-stratified calibrations. Tissue Antigens 57:405-414 (Pubitemid 32590839)
-
(2001)
Tissue Antigens
, vol.57
, Issue.5
, pp. 405-414
-
-
Lauemoller, S.L.1
Holm, A.2
Hilden, J.3
Brunak, S.4
Holst Nissen, M.5
Stryhn, A.6
Stergaard Pedersen, L.7
Buus, S.8
-
20
-
-
0033586476
-
Viremia and AIDS in rhesus macaques after intramuscular inoculation of plasmid DNA encoding full-length SIVmac239
-
DOI 10.1089/088922299311196
-
Liska V, Khimani AH, Hofmann-Lehmann R, Fink AN, Vlasak J, Ruprecht RM (1999) Viremia and AIDS in rhesus macaques after intramuscular inoculation of plasmid DNA encoding full-length SIVmac239. AIDS Res Hum Retroviruses 15:445-450 (Pubitemid 29143202)
-
(1999)
AIDS Research and Human Retroviruses
, vol.15
, Issue.5
, pp. 445-450
-
-
Liska, V.1
Khimani, A.H.2
Hofmann-Lehmann, R.3
Fink, A.N.4
Vlasak, J.5
Ruprecht, R.M.6
-
21
-
-
6344234923
-
+ T cell epitopes restricted by the high frequency molecule, Mamu-A*02, and potential escape from CTL recognition
-
Loffredo JT, Sidney J, Wojewoda C, Dodds E, Reynolds MR, Napoe G, Mothe BR, O'Connor DH, Wilson NA, Watkins DI, Sette A (2004) Identification of seventeen new simian immunodeficiency virus-derived CD8+ T cell epitopes restricted by the high frequen cy molecule, Mamu-A*02, and potential escape from CTL recognition. J Immunol 173:5064-5076 (Pubitemid 39387789)
-
(2004)
Journal of Immunology
, vol.173
, Issue.8
, pp. 5064-5076
-
-
Loffredo, J.T.1
Sidney, J.2
Wojewoda, C.3
Dodds, E.4
Reynolds, M.R.5
Napoe, G.6
Mothe, B.R.7
O'Connor, D.H.8
Wilson, N.A.9
Watkins, D.I.10
Sette, A.11
-
22
-
-
27144549825
-
mac239
-
Loffredo JT, Sidney J, Piaskowski S, Szymanski A, Furlott J, Rudersdorf R, Reed J, Peters B, Hickman-Miller HD, Bardet W, Rehrauer WM, O'Connor DH, Wilson NA, Hildebrand WH, Sette A, Watkins DI (2005) The high frequency Indian rhesus macaque MHC class I molecule, Mamu-B*01, does not appear to be involved in CD8+ T lymphocyte responses to SIVmac239. J Immunol 175:5986-5997 (Pubitemid 41508084)
-
(2005)
Journal of Immunology
, vol.175
, Issue.9
, pp. 5986-5997
-
-
Loffredo, J.T.1
Sidney, J.2
Piaskowski, S.3
Szymanski, A.4
Furlott, J.5
Rudersdorf, R.6
Reed, J.7
Peters, B.8
Hickman-Miller, H.D.9
Bardet, W.10
Rehrauer, W.M.11
O'Connor, D.H.12
Wilson, N.A.13
Hildebrand, W.H.14
Sette, A.15
Watkins, D.I.16
-
23
-
-
67649172577
-
Two MHC class i molecules associated with elite control of immunodeficiency virus replication, Mamu-B*08 and HLA-B*2705, bind peptides with sequence similarity
-
Loffredo JT, Sidney J, Bean AT, Beal DR, Bardet W, Wahl A, Hawkins OE, Piaskowski S, Wilson NA, Hildebrand WH, Watkins DI, Sette A (2009) Two MHC class I molecules associated with elite control of immunodeficiency virus replication, Mamu-B*08 and HLA-B*2705, bind peptides with sequence similarity. J Immunol 182:7763-7775
-
(2009)
J Immunol
, vol.182
, pp. 7763-7775
-
-
Loffredo, J.T.1
Sidney, J.2
Bean, A.T.3
Beal, D.R.4
Bardet, W.5
Wahl, A.6
Hawkins, O.E.7
Piaskowski, S.8
Wilson, N.A.9
Hildebrand, W.H.10
Watkins, D.I.11
Sette, A.12
-
24
-
-
56149115238
-
Natural host genetic resistance to lentiviral CNS disease: A neuroprotective MHC class i allele in siv-infected macaques
-
Mankowski JL, Queen SE, Fernandez CS, Tarwater PM, Karper JM, Adams RJ, Kent SJ (2008) Natural host genetic resistance to lentiviral CNS disease: a neuroprotective MHC class I allele in SIV-infected macaques. PLoS One 3:e3603
-
(2008)
PLoS One
, vol.3
-
-
Mankowski, J.L.1
Queen, S.E.2
Fernandez, C.S.3
Tarwater, P.M.4
Karper, J.M.5
Adams, R.J.6
Kent, S.J.7
-
25
-
-
0025998623
-
Definition of an epitope and MHC class i molecule recognized by gag-specific cytotoxic T lymphocytes in sivmac-infected rhesus monkeys
-
Miller MD, Yamamoto H, Hughes AL, Watkins DI, Letvin NL (1991) Definition of an epitope and MHC class I molecule recognized by gag-specific cytotoxic T lymphocytes in SIVmac-infected rhesus monkeys. J Immunol 147:320-329
-
(1991)
J Immunol
, vol.147
, pp. 320-329
-
-
Miller, M.D.1
Yamamoto, H.2
Hughes, A.L.3
Watkins, D.I.4
Letvin, N.L.5
-
26
-
-
0036644216
-
Characterization of the peptide-binding specificity of Mamu-B*17 and identification of Mamu-B*17-restricted epitopes derived from simian immunodeficiency virus proteins
-
Mothe BR, Sidney J, Dzuris JL, Liebl ME, Fuenger S, Watkins DI, Sette A (2002) Characterization of the peptide-binding specificity of Mamu-B*17 and identification of Mamu-B*17-restricted epit-opes derived from simian immunodeficiency virus proteins. J Immunol 169:210-219 (Pubitemid 34686138)
-
(2002)
Journal of Immunology
, vol.169
, Issue.1
, pp. 210-219
-
-
Mothe, B.R.1
Sidney, J.2
Dzuris, J.L.3
Liebl, M.E.4
Fuenger, S.5
Watkins, D.I.6
Sette, A.7
-
27
-
-
26644444563
-
A computational resource for the prediction of peptide binding to indian rhesus macaque MHC class i molecules
-
Peters B, Bui HH, Sidney J, Weng Z, Loffredo JT, Watkins DI, Mothe BR, Sette A (2005) A computational resource for the prediction of peptide binding to Indian rhesus macaque MHC class I molecules. Vaccine
-
(2005)
Vaccine
-
-
Peters, B.1
Bui, H.H.2
Sidney, J.3
Weng, Z.4
Loffredo, J.T.5
Watkins, D.I.6
Mothe, B.R.7
Sette, A.8
-
28
-
-
33745584371
-
A community resource benchmarking predictions of peptide binding to MHC-I molecules
-
Peters B, Bui H-H, Frankild S, Nielsen M, Lundegaard C, Kostem E, Basch D, Lamberth K, Harndahl M, Fleri W, Wilson SS, Sidney J, Lund O, Buus S, Sette A (2006) A community resource benchmarking predictions of peptide binding to MHC-I molecules. PLoS Comput Biol 2:e65
-
(2006)
PLoS Comput Biol
, vol.2
-
-
Peters, B.1
Bui, H.-H.2
Frankild, S.3
Nielsen, M.4
Lundegaard, C.5
Kostem, E.6
Basch, D.7
Lamberth, K.8
Harndahl, M.9
Fleri, W.10
Wilson, S.S.11
Sidney, J.12
Lund, O.13
Buus, S.14
Sette, A.15
-
29
-
-
33751252825
-
MHC class I allele frequencies in pigtail macaques of diverse origin
-
DOI 10.1007/s00251-006-0164-8
-
Pratt BF, O'Connor DH, Lafont BA, Mankowski JL, Fernandez CS, Triastuti R, Brooks AG, Kent SJ, Smith MZ (2006) MHC class I allele frequencies in pigtail macaques of diverse origin. Immuno-genetics 58:995-1001 (Pubitemid 44791232)
-
(2006)
Immunogenetics
, vol.58
, Issue.12
, pp. 995-1001
-
-
Pratt, B.F.1
O'Connor, D.H.2
Lafont, B.A.P.3
Mankowski, J.L.4
Fernandez, C.S.5
Triastuti, R.6
Brooks, A.G.7
Kent, S.J.8
Smith, M.Z.9
-
30
-
-
77958536372
-
Timing of immune escape linked to success or failure of vaccination
-
Reece JC, Loh L, Alcantara S, Fernandez CS, Stambas J, Sexton A, De Rose R, Petravic J, Davenport MP, Kent SJ (2010) Timing of immune escape linked to success or failure of vaccination. PLoS ONE 5
-
(2010)
PLoS ONE
, pp. 5
-
-
Reece, J.C.1
Loh, L.2
Alcantara, S.3
Fernandez, C.S.4
Stambas, J.5
Sexton, A.6
De Rose, R.7
Petravic, J.8
Davenport, M.P.9
Kent, S.J.10
-
31
-
-
82755198004
-
The role of MHC class i allele Mamu-A*07 during SIV(mac)239 infection
-
Reed JS, Sidney J, Piaskowski SM, Glidden CE, Leon EJ, Burwitz BJ, Kolar HL, Eernisse CM, Furlott JR, Maness NJ, Walsh AD, Rudersdorf RA, Bardet W, McMurtrey CP, O'Connor DH, Hildebrand WH, Sette A, Watkins DI, Wilson NA (2011) The role of MHC class I allele Mamu-A*07 during SIV(mac)239 infection. Immunogenetics 63:789-807
-
(2011)
Immunogenetics
, vol.63
, pp. 789-807
-
-
Reed, J.S.1
Sidney, J.2
Piaskowski, S.M.3
Glidden, C.E.4
Leon, E.J.5
Burwitz, B.J.6
Kolar, H.L.7
Eernisse, C.M.8
Furlott, J.R.9
Maness, N.J.10
Walsh, A.D.11
Rudersdorf, R.A.12
Bardet, W.13
McMurtrey, C.P.14
O'Connor, D.H.15
Hildebrand, W.H.16
Sette, A.17
Watkins, D.I.18
Wilson, N.A.19
-
32
-
-
0027304399
-
Prominent role of secondary anchor residues in peptide binding to HLA- A2.1 molecules
-
DOI 10.1016/0092-8674(93)90472-3
-
Ruppert J, Sidney J, Celis E, Kubo RT, Grey HM, Sette A (1993) Prominent role of secondary anchor residues in peptide binding to HLA-A2.1 molecules. Cell 74:929-937 (Pubitemid 23270612)
-
(1993)
Cell
, vol.74
, Issue.5
, pp. 929-937
-
-
Ruppert, J.1
Sidney, J.2
Celis, E.3
Kubo, R.T.4
Grey, H.M.5
Sette, A.6
-
33
-
-
2342625375
-
Induction of Disease by a Molecularly Cloned Highly Pathogenic Simian Immunodeficiency Virus/Human Immunodeficiency Virus Chimera Is Multigenic
-
DOI 10.1128/JVI.78.10.5513-5519.2004
-
Sadjadpour R, Theodore TS, Igarashi T, Donau OK, Plishka RJ, Buckler-White A, Martin MA (2004) Induction of disease by a molecularly cloned highly pathogenic simian immunodeficiency virus/human immunodeficiency virus chimera is multigenic. J Virol 78:5513-5519 (Pubitemid 38581502)
-
(2004)
Journal of Virology
, vol.78
, Issue.10
, pp. 5513-5519
-
-
Sadjadpour, R.1
Theodore, T.S.2
Igarashi, T.3
Donau, O.K.4
Plishka, R.J.5
Buckler-White, A.6
Martin, M.A.7
-
34
-
-
0027973079
-
The relationship between class I binding affinity and immunogenicity of potential cytotoxic T cell epitopes
-
Sette A, Vitiello A, Reherman B, Fowler P, Nayersina R, Kast WM, Melief CJ, Oseroff C, Yuan L, Ruppert J, Sidney J, del Guercio MF, Southwood S, Kubo RT, Chesnut RW, Grey HM, Chisari FV (1994) The relationship between class I binding affinity and immunogenicity of potential cytotoxic T cell epitopes. J Immunol 153:5586-5592 (Pubitemid 24377694)
-
(1994)
Journal of Immunology
, vol.153
, Issue.12
, pp. 5586-5592
-
-
Sette, A.1
Vitiello, A.2
Reherman, B.3
Fowler, P.4
Nayersina, R.5
Kast, W.M.6
Melief, C.J.M.7
Oseroff, C.8
Yuan, L.9
Ruppert, J.10
Sidney, J.11
Del Guercio, M.-F.12
Southwood, S.13
Kubo, R.T.14
Chesnut, R.W.15
Grey, H.M.16
Chisari, F.V.17
-
35
-
-
17944382046
-
Characterization of the peptide-binding specificity of Mamu-A*11 results in the identification of SIV-derived epitopes and interspecies cross-reactivity
-
Sette A, Sidney J, Bui HH, Del Guercio MF, Alexander J, Loffredo J, Watkins DI, Mothe BR (2005) Characterization of the peptide-binding specificity of Mamu-A*11 results in the identification of SIV-derived epitopes and interspecies cross-reactivity. Immunogenetics
-
(2005)
Immunogenetics
-
-
Sette, A.1
Sidney, J.2
Bui, H.H.3
Del Guercio, M.F.4
Alexander, J.5
Loffredo, J.6
Watkins, D.I.7
Mothe, B.R.8
-
36
-
-
0024542612
-
Production of human cells expressing individual transferred HLA-A,-B,-C genes using an HLA-A,-B,-C null human cell line
-
Shimizu Y, DeMars R (1989) Production of human cells expressing individual transferred HLA-A,-B,-C genes using an HLA-A,-B,-C null human cell line. J Immunol 142:3320-3328 (Pubitemid 19129961)
-
(1989)
Journal of Immunology
, vol.142
, Issue.9
, pp. 3320-3328
-
-
Shimizu, Y.1
DeMars, R.2
-
37
-
-
0034353517
-
Definition of the mamu a*01 peptide binding specificity: Application to the identification of wild-type and optimized ligands from simian immunodeficiency virus regulatory proteins
-
Sidney J, Dzuris JL, Newman MJ, Johnson RP, Kaur A, Amitinder K, Walker CM, Appella E, Mothe B, Watkins DI, Sette A (2000) Definition of the Mamu a*01 peptide binding specificity: application to the identification of wild-type and optimized ligands from simian immunodeficiency virus regulatory proteins. J Immunol 165:6387-6399
-
(2000)
J Immunol
, vol.165
, pp. 6387-6399
-
-
Sidney, J.1
Dzuris, J.L.2
Newman, M.J.3
Johnson, R.P.4
Kaur, A.5
Amitinder, K.6
Walker, C.M.7
Appella, E.8
Mothe, B.9
Watkins, D.I.10
Sette, A.11
-
38
-
-
44649199436
-
Measurement of mhc/peptide interactions by gel filtration
-
Sidney J, Southwood S, Oseroff C, del Guercio MF, Sette A, Grey HM (2001) Measurement of MHC/peptide interactions by gel filtration. Curr Protoc Immunol Chapter 18:Unit 18 3
-
(2001)
Curr Protoc Immunol Chapter 18:Unit
, vol.18
, pp. 3
-
-
Sidney, J.1
Southwood, S.2
Oseroff, C.3
Del Guercio, M.F.4
Sette, A.5
Grey, H.M.6
-
39
-
-
34548677778
-
Characterization of the peptide-binding specificity of the chimpanzee class i alleles a*0301 and a*0401 using a combinatorial peptide library
-
Sidney J, Peters B, Moore C, Pencille TJ, Ngo S, Masterman KA, Asabe S, Pinilla C, Chisari FV, Sette A (2007) Characterization of the peptide-binding specificity of the chimpanzee class I alleles A*0301 and A*0401 using a combinatorial peptide library. Immunogenetics
-
(2007)
Immunogenetics
-
-
Sidney, J.1
Peters, B.2
Moore, C.3
Pencille, T.J.4
Ngo, S.5
Masterman, K.A.6
Asabe, S.7
Pinilla, C.8
Chisari, F.V.9
Sette, A.10
-
40
-
-
39549085122
-
Quantitative peptide binding motifs for 19 human and mouse MHC class i molecules derived using positional scanning combinatorial peptide libraries
-
Sidney J, Assarsson E, Moore C, Ngo S, Pinilla C, Sette A, Peters B (2008a) Quantitative peptide binding motifs for 19 human and mouse MHC class I molecules derived using positional scanning combinatorial peptide libraries. Immunome Res 4:2
-
(2008)
Immunome Res
, vol.4
, pp. 2
-
-
Sidney, J.1
Assarsson, E.2
Moore, C.3
Ngo, S.4
Pinilla, C.5
Sette, A.6
Peters, B.7
-
41
-
-
39649122106
-
HLA class i supertypes: A revised and updated classification
-
Sidney J, Peters B, Frahm N, Brander C, Sette A (2008b) HLA class I supertypes: a revised and updated classification. BMC Immunol 9:1
-
(2008)
BMC Immunol
, vol.9
, pp. 1
-
-
Sidney, J.1
Peters, B.2
Frahm, N.3
Brander, C.4
Sette, A.5
-
42
-
-
0032764952
-
Retrospective analysis of viral load and SIV antibody responses in rhesus macaques infected with pathogenic SIV: Predictive value for disease progression
-
Smith SM, Holland B, Russo C, Dailey PJ, Marx PA, Connor RI (1999) Retrospective analysis of viral load and SIV antibody responses in rhesus macaques infected with pathogenic SIV: predictive value for disease progression. AIDS Res Hum Retroviruses 15:1691-1701
-
(1999)
AIDS Res Hum Retroviruses
, vol.15
, pp. 1691-1701
-
-
Smith, S.M.1
Holland, B.2
Russo, C.3
Dailey, P.J.4
Marx, P.A.5
Connor, R.I.6
-
43
-
-
19944429165
-
Analysis of pigtail macaque major histocompatibility complex class I molecules presenting immunodominant simian immunodeficiency virus epitopes
-
DOI 10.1128/JVI.79.2.684-695.2005
-
Smith MZ, Dale CJ, De Rose R, Stratov I, Fernandez CS, Brooks AG, Weinfurter J, Krebs K, Riek C, Watkins DI, O'Connor DH, Kent SJ (2005) Analysis of pigtail macaque major histocompatibility complex class I molecules presenting immunodominant simian immunodeficiency virus epitopes. J Virol 79:684-695 (Pubitemid 40053851)
-
(2005)
Journal of Virology
, vol.79
, Issue.2
, pp. 684-695
-
-
Smith, M.Z.1
Dale, C.J.2
De Rose, R.3
Stratov, I.4
Fernandez, C.S.5
Brooks, A.G.6
Weinfurter, J.7
Krebs, K.8
Riek, C.9
Watkins, D.I.10
O'Connor, D.H.11
Kent, S.J.12
-
44
-
-
77954423737
-
The most common Chinese rhesus macaque MHC class i molecule shares peptide binding repertoire with the HLA-B7 supertype
-
Solomon C, Southwood S, Hoof I, Rudersdorf R, Peters B, Sidney J, Pinilla C, Marcondes MC, Ling B, Marx P, Sette A, Mothe BR (2010) The most common Chinese rhesus macaque MHC class I molecule shares peptide binding repertoire with the HLA-B7 supertype. Immunogenetics 62:451-464
-
(2010)
Immunogenetics
, vol.62
, pp. 451-464
-
-
Solomon, C.1
Southwood, S.2
Hoof, I.3
Rudersdorf, R.4
Peters, B.5
Sidney, J.6
Pinilla, C.7
Marcondes, M.C.8
Ling, B.9
Marx, P.10
Sette, A.11
Mothe, B.R.12
-
45
-
-
79953829168
-
Functional analysis of frequently expressed Chinese rhesus macaque MHC class i molecules Mamu-A1*02601 and Mamu-B*08301 reveals HLA-A2 and HLA-A3 supertypic specificities
-
Southwood S, Solomon C, Hoof I, Rudersdorf R, Sidney J, Peters B, Wahl A, Hawkins O, Hildebrand W, Mothe BR, Sette A (2011) Functional analysis of frequently expressed Chinese rhesus macaque MHC class I molecules Mamu-A1*02601 and Mamu-B*08301 reveals HLA-A2 and HLA-A3 supertypic specificities. Immunogenetics 63(5):275-290
-
(2011)
Immunogenetics
, vol.63
, Issue.5
, pp. 275-290
-
-
Southwood, S.1
Solomon, C.2
Hoof, I.3
Rudersdorf, R.4
Sidney, J.5
Peters, B.6
Wahl, A.7
Hawkins, O.8
Hildebrand, W.9
Mothe, B.R.10
Sette, A.11
-
46
-
-
9444240941
-
Peptide binding specificity of major histocompatibility complex class I resolved into an array of apparently independent subspecificities: Quantitation by peptide libraries and improved prediction of binding
-
Stryhn A, Pedersen LO, Romme T, Holm CB, Holm A, Buus S (1996) Peptide binding specificity of major histocompatibility complex class I resolved into an array of apparently independent subspe-cificities: quantitation by peptide libraries and improved prediction of binding. Eur J Immunol 26:1911-1918 (Pubitemid 26283169)
-
(1996)
European Journal of Immunology
, vol.26
, Issue.8
, pp. 1911-1918
-
-
Stryhn, A.1
Pedersen, L.O.2
Romme, T.3
Holm, C.B.4
Holm, A.5
Buus, S.6
-
47
-
-
0029005514
-
Decrypting the structure of major histocompatibility complex class i-restricted cytotoxic T lymphocyte epitopes with complex peptide libraries
-
Udaka K, Wiesmuller KH, Kienle S, Jung G, Walden P (1995) Decrypting the structure of major histocompatibility complex class I-restricted cytotoxic T lymphocyte epitopes with complex peptide libraries. J Exp Med 181:2097-2108
-
(1995)
J Exp Med
, vol.181
, pp. 2097-2108
-
-
Udaka, K.1
Wiesmuller, K.H.2
Kienle, S.3
Jung, G.4
Walden, P.5
-
48
-
-
0033866228
-
An automated prediction of MHC class I-binding peptides based on positional scanning with peptide libraries
-
DOI 10.1007/s002510000217
-
UdakaK, Wiesmuller KH, Kienle S, Jung G, Tamamura H, Yamagishi H, Okumura K, Walden P, Suto T, Kawasaki T (2000) An automated prediction of MHC class I-binding peptides based on positional scanning with peptide libraries. Immunogenetics 51:816-828 (Pubitemid 30612045)
-
(2000)
Immunogenetics
, vol.51
, Issue.10
, pp. 816-828
-
-
Udaka, K.1
Wiesmuller, K.-H.2
Kienle, S.3
Jung, G.4
Tamamura, H.5
Yamagishi, H.6
Okumura, K.7
Walden, P.8
Suto, T.9
Kawasaki, T.10
-
49
-
-
58749083921
-
Methods for analyzing peptides and proteins on a chromatograph-ic timescale by electron-transfer dissociation mass spectrometry
-
Udeshi ND, Compton PD, Shabanowitz J, Hunt DF, Rose KL (2008) Methods for analyzing peptides and proteins on a chromatograph-ic timescale by electron-transfer dissociation mass spectrometry. Nat Protoc 3:1709-1717
-
(2008)
Nat Protoc
, vol.3
, pp. 1709-1717
-
-
Udeshi, N.D.1
Compton, P.D.2
Shabanowitz, J.3
Hunt, D.F.4
Rose, K.L.5
-
50
-
-
67650490264
-
Diverse recognition of conserved orthopoxvirus cd8+ tcell epitopes in vaccinated rhesus macaques
-
Walsh SR, Gillis J, Peters B, Mothe BR, Sidney J, Sette A, Johnson RP (2009) Diverse recognition of conserved orthopoxvirus CD8+ Tcell epitopes in vaccinated rhesus macaques. Vaccine 27:4990-5000
-
(2009)
Vaccine
, vol.27
, pp. 4990-5000
-
-
Walsh, S.R.1
Gillis, J.2
Peters, B.3
Mothe, B.R.4
Sidney, J.5
Sette, A.6
Johnson, R.P.7
|