Illuminating the wall: Using click chemistry to image pectins in Arabidopsis cell walls

Plant Signaling and Behavior

Volumn 7, Issue 6, 2012, Pages 661-663

  Anderson, Charles T ^a   Wallace, Ian S ^b  

^a PENNSYLVANIA STATE UNIVERSITY   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Cell wall; Click chemistry; Dynamics; Fluorescent; Fucose; Metabolic labeling; Pectin; Rhamnogalacturonan I

Indexed keywords

FUCOSE; PECTIN;

ARABIDOPSIS; ARTICLE; BIOLOGICAL MODEL; CELL WALL; CHEMISTRY; CLICK CHEMISTRY; CYTOLOGY; HUMAN; METABOLISM; METHODOLOGY; PLANT CELL; THREE DIMENSIONAL IMAGING;

ARABIDOPSIS; CELL WALL; CLICK CHEMISTRY; FUCOSE; HUMANS; IMAGING, THREE-DIMENSIONAL; MODELS, BIOLOGICAL; PECTINS; PLANT CELLS;

ANIMALIA; ARABIDOPSIS; ARABIDOPSIS THALIANA; FUNGI;

EID: 84863919900     PISSN: 15592316     EISSN: 15592324     Source Type: Journal    
DOI: 10.4161/psb.19939     Document Type: Article

References (26)

1. Endler A, Persson S. Cellulose Synthases and Synthesis in Arabidopsis. Mol Plant 2011.
2. Keegstra K. Plant cell walls. Plant Physiol 2010; 154:483-6; http://dx.doi.org/10.1104/pp.110.161240.
3. Bonawitz ND, Chapple C. The genetics of lignin biosynthesis: connecting genotype to phenotype. Annu Rev Genet 2010; 44:337-63; http://dx.doi. org/10.1146/annurev-genet-102209-163508.
4. Cosgrove DJ. Growth of the plant cell wall. Nat Rev Mol Cell Biol 2005; 6:850-61; http://dx.doi. org/10.1038/nrm1746.
5. Lee KJ, Marcus SE, Knox JP. Cell wall biology: perspectives from cell wall imaging. Mol Plant 2011; 4:212-9; http://dx.doi.org/10.1093/mp/ssq075.
6. Rabuka D, Hubbard SC, Laughlin ST, Argade SP, Bertozzi CR. A chemical reporter strategy to probe glycoprotein fucosylation. J Am Chem Soc 2006; 128:12078-9; http://dx.doi.org/10.1021/ja064619y.
7. Dehnert KW, Beahm BJ, Huynh TT, Baskin JM, Laughlin ST, Wang W, et al. Metabolic labeling of fucosylatedglycans in developing zebrafish. ACS Chem Biol 2011; 6:547-52; http://dx.doi. org/10.1021/cb100284d.
8. Anderson CT, Wallace IS, Somerville CR. Metabolic click-labeling with a fucose analog reveals pectin delivery, architecture and dynamics in Arabidopsis cell walls. Proc Natl Acad Sci USA 2012; 109:1329-34; http://dx.doi.org/10.1073/pnas.1120429109.
9. Laughlin ST, Bertozzi CR. Imaging the glycome. Proc Natl Acad Sci USA 2009; 106:12-7; http://dx.doi.org/10.1073/pnas.0811481106.
10. Kotake T, Hojo S, Tajima N, Matsuoka K, Koyama T, Tsumuraya Y. A bifunctional enzyme with L-fucokinase and GDP-L-fucosepyrophosphorylase activities salvages free L-fucose in Arabidopsis. J Biol Chem 2008; 283:8125-35; http://dx.doi. org/10.1074/jbc.M710078200.
11. Bar-Peled M, O'Neill MA. Plant nucleotide sugar formation, interconversion and salvage by sugar recycling. Annu Rev Plant Biol 2011; 62:127-55; http://dx.doi.org/10.1146/annurev-arplant-042110-103918.
12. Vanzin GF, Madson M, Carpita NC, Raikhel NV, Keegstra K, Reiter WD. The mur2 mutant of Arabidopsis thaliana lacks fucosylatedxyloglucan because of a lesion in fucosyltransferase AtFUT1. Proc Natl Acad Sci USA 2002; 99:3340-5; http://dx.doi.org/10.1073/pnas.052450699.
13. Strasser R, Altmann F, Mach L, Glossl J, Steinkellner H. Generation of Arabidopsis thaliana plants with complex N-glycans lacking beta1,2-linked xylose and core alpha1,3-linked fucose. FEBS Lett 2004; 561:132-6; http://dx.doi.org/10.1016/S0014-5793(04)00150-4.
14. Wu Y, Williams M, Bernard S, Driouich A, Showalter AM, Faik A. Functional identification of two nonredundant Arabidopsis alpha(1,2)fucosyltransferases specific to arabinogalactan proteins. J Biol Chem 2010; 285:13638-45; http://dx.doi.org/10.1074/jbc. M110.102715.
15. Lerouge P, O'Neill MA, Darvill AG, Albersheim P. Structural characterization of endo-glycanase-generated oligoglycosyl side chains of rhamnogalacturonan I. Carbohydr Res 1993; 243:359-71; http://dx.doi. org/10.1016/0008-6215(93)87039-U.
16. Glushka JN, Terrell M, York WS, O'Neill MA, Gucwa A, Darvill AG, et al. Primary structure of the 2-O-methyl-alpha-L-fucose-containing side chain of the pectic polysaccharide, rhamnogalacturonan II. Carbohydr Res 2003; 338:341-52; http://dx.doi. org/10.1016/S0008-6215(02)00461-5.
17. Bonin CP, Potter I, Vanzin GF, Reiter WD. The MUR1 gene of Arabidopsis thaliana encodes an isoform of GDP-D-mannose-4,6-dehydratase, catalyzing the first step in the de novo synthesis of GDPL-fucose. Proc Natl Acad Sci USA 1997; 94:2085-90; http://dx.doi.org/10.1073/pnas.94.5.2085.
18. Lamesch P, Berardini TZ, Li D, Swarbreck D, Wilks C, Sasidharan R, et al. The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools. Nucleic Acids Res 2012; 40:1202-10; http://dx.doi.org/10.1093/nar/gkr1090.
19. Sawa M, Hsu TL, Itoh T, Sugiyama M, Hanson SR, Vogt PK, et al. Glycoproteomic probes for fluorescent imaging of fucosylatedglycans in vivo. Proc Natl Acad Sci USA 2006; 103:12371-6; http://dx.doi. org/10.1073/pnas.0605418103.
20. Reiter WD, Chapple C, Somerville CR. Mutants of Arabidopsis thaliana with altered cell wall polysaccharide composition. Plant J 1997; 12:335-45; http://dx.doi.org/10.1046/j.1365-313X.1997.12020335.x.
21. O'Neill MA, Eberhard S, Albersheim P, Darvill AG. Requirement of borate cross-linking of cell wall rhamnogalacturonan II for Arabidopsis growth. Science 2001; 294:846-9; http://dx.doi.org/10.1126/science.1062319.
22. Lee LV, Mitchell ML, Huang SJ, Fokin VV, Sharpless KB, Wong CH. A potent and highly selective inhibitor of human alpha-1,3-fucosyltransferase via click chemistry. J Am Chem Soc 2003; 125:9588-9; http://dx.doi.org/10.1021/ja0302836.
23. Ralet MC, Lerouge P, Quemener B. Mass spectrometry for pectin structure analysis. Carbohydr Res 2009; 344:1798-807; http://dx.doi.org/10.1016/j. carres.2008.08.036.
24. Soriano Del Amo D, Wang W, Jiang H, Besanceney C, Yan AC, Levy M, et al. Biocompatible copper(I) catalysts for in vivo imaging of glycans. J Am Chem Soc 2010; 132:16893-9; http://dx.doi.org/10.1021/ja106553e.
25. Baskin JM, Prescher JA, Laughlin ST, Agard NJ, Chang PV, Miller IA, et al. Copper-free click chemistry for dynamic in vivo imaging. Proc Natl Acad Sci USA 2007; 104:16793-7; http://dx.doi.org/10.1073/pnas.0707090104.
26. Nandi A, Sprung R, Barma DK, Zhao Y, Kim SC, Falck JR. Global identification of O-GlcNAcmodified proteins. Anal Chem 2006; 78:452-8; http://dx.doi.org/10.1021/ac051207j.