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Volumn 16, Issue 7-8, 2012, Pages 363-373

Simultaneous analysis of multiple data types in pharmacogenomic studies using weighted sparse canonical correlation analysis

Author keywords

[No Author keywords available]

Indexed keywords

ANGIOPOIETIN 2; ARL2BP PROTEIN; CENTROMERE PROTEIN B; CLDN23 PROTEIN; ERS2 PROTEIN; FKBP5 PROTEIN; GCAT PROTEIN; GEMCITABINE; HLA DR ANTIGEN; INPP5F PROTEIN; LAIR1 PROTEIN; LAMA3 PROTEIN; MESSENGER RNA; METHYLATED DNA PROTEIN CYSTEINE METHYLTRANSFERASE; MITOGEN ACTIVATED PROTEIN KINASE 10; NIPSNAP3A PROTEIN; NIPSNAP3B PROTEIN; NPM1P3 PROTEIN; PIGB PROTEIN; PIK3R1 PROTEIN; PROTEIN; PROTEIN PATCHED 1; PSME3 PROTEIN; RAB27A PROTEIN; RCBTB2 PROTEIN; REPS2 PROTEIN; RNF26 PROTEIN; TRANSFORMING GROWTH FACTOR BETA1; UNCLASSIFIED DRUG; VARS PROTEIN; VAV3 PROTEIN;

EID: 84863902530     PISSN: 15362310     EISSN: 15578100     Source Type: Journal    
DOI: 10.1089/omi.2011.0126     Document Type: Article
Times cited : (16)

References (22)
  • 1
    • 0037316303 scopus 로고    scopus 로고
    • A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
    • Bolstad, B.M., Irizarry, R.A., Astrand, M., and Speed, T.P. (2003). A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. Bioinformatics 19, 185-193.
    • (2003) Bioinformatics , vol.19 , pp. 185-193
    • Bolstad, B.M.1    Irizarry, R.A.2    Astrand, M.3    Speed, T.P.4
  • 2
    • 70449435534 scopus 로고    scopus 로고
    • A Bayesian hierarchical nonlinear model for assessing the association between genetic variation and drug cytotoxicity
    • Fridley, B.L., Jenkins, G., Schaid, D.J., and Wang, L. (2009). A Bayesian hierarchical nonlinear model for assessing the association between genetic variation and drug cytotoxicity. Statistics Med 28, 2709-2722.
    • (2009) Statistics Med. , vol.28 , pp. 2709-2722
    • Fridley, B.L.1    Jenkins, G.2    Schaid, D.J.3    Wang, L.4
  • 4
    • 34447315844 scopus 로고    scopus 로고
    • Testing association between disease and multiple SNPs in a candidate gene
    • Gauderman, W.J., Murcray, C., Gilliland, F., and Conti, D.V. (2007). Testing association between disease and multiple SNPs in a candidate gene. Genet Epidemiol 31, 383-395.
    • (2007) Genet. Epidemiol. , vol.31 , pp. 383-395
    • Gauderman, W.J.1    Murcray, C.2    Gilliland, F.3    Conti, D.V.4
  • 5
    • 0037444214 scopus 로고    scopus 로고
    • Genomic convergence: Identifying candidate genes for Parkinson's disease by combining serial analysis of gene expression and genetic linkage
    • Hauser, M.A., Li, Y.J., Takeuchi, S., et al. (2003). Genomic convergence: Identifying candidate genes for Parkinson's disease by combining serial analysis of gene expression and genetic linkage. Hum Molec Genet 12, 671-677.
    • (2003) Hum. Molec. Genet. , vol.12 , pp. 671-677
    • Hauser, M.A.1    Li, Y.J.2    Takeuchi, S.3
  • 6
    • 0000107975 scopus 로고
    • Relations between two sets of variates
    • Hotelling, H. (1936). Relations between two sets of variates. Biometrika Trust 38, 321-377.
    • (1936) Biometrika Trust. , vol.38 , pp. 321-377
    • Hotelling, H.1
  • 7
    • 44849121698 scopus 로고    scopus 로고
    • Genetic variants contributing to daunorubicin-induced cytotoxicity
    • Huang, R.S., Duan, S., Kistner, E.O., et al. (2008). Genetic variants contributing to daunorubicin-induced cytotoxicity. Cancer Res 68, 3161-3168.
    • (2008) Cancer Res. , vol.68 , pp. 3161-3168
    • Huang, R.S.1    Duan, S.2    Kistner, E.O.3
  • 9
    • 52049100798 scopus 로고    scopus 로고
    • Gemcitabine and cytosine arabinoside cytotoxicity: Association with lymphoblastoid cell expression
    • Li, L., Fridley, B., Kalari, K., et al. (2008). Gemcitabine and cytosine arabinoside cytotoxicity: ASSOCIATION with lymphoblastoid cell expression. Cancer Res 68, 7050-7058.
    • (2008) Cancer Res. , vol.68 , pp. 7050-7058
    • Li, L.1    Fridley, B.2    Kalari, K.3
  • 10
    • 70450189297 scopus 로고    scopus 로고
    • Gemcitabine and arabinosylcytosin pharmacogenomics: Genome-wide association and drug response biomarkers
    • Li, L., Fridley, B.L., Kalari, K., et al. (2009). Gemcitabine and arabinosylcytosin pharmacogenomics: Genome-wide association and drug response biomarkers. PLoS One 4, e7765.
    • (2009) Plos One , vol.4
    • Li, L.1    Fridley, B.L.2    Kalari, K.3
  • 11
  • 12
    • 78649300012 scopus 로고    scopus 로고
    • Radiation pharmacogenomics: A genome-wide association approach to identify radiation response biomarkers using human lymphoblastoid cell lines
    • Niu, N., Qin, Y., Fridley, B.L., et al. (2010). Radiation pharmacogenomics: A genome-wide association approach to identify radiation response biomarkers using human lymphoblastoid cell lines. Genome Res 20,1482-1492.
    • (2010) Genome. Res. , vol.20 , pp. 1482-1492
    • Niu, N.1    Qin, Y.2    Fridley, B.L.3
  • 13
    • 62449336277 scopus 로고    scopus 로고
    • Sparse canonical correlation analysis with application to genomic data integration
    • Article 1
    • Parkhomenko, E., Tritchler, D., and Beyene, J. (2009). Sparse canonical correlation analysis with application to genomic data integration. Statistical Appl Genet Molec Biol 8, Article 1.
    • (2009) Statistical Appl. Genet. Molec. Biol. , vol.8
    • Parkhomenko, E.1    Tritchler, D.2    Beyene, J.3
  • 14
    • 33746512512 scopus 로고    scopus 로고
    • Principal components analysis corrects for stratification in genome-wide association studies
    • Price, A.L., Patterson, N.J., Plenge, R.M., Weinblatt, M.E., Shadick, N.A., and Reich, D. (2006). Principal components analysis corrects for stratification in genome-wide association studies. Nature Genet 38, 904-909.
    • (2006) Nature Genet. , vol.38 , pp. 904-909
    • Price, A.L.1    Patterson, N.J.2    Plenge, R.M.3    Weinblatt, M.E.4    Shadick, N.A.5    Reich, D.6
  • 16
    • 22844446947 scopus 로고    scopus 로고
    • An integrative genomics approach to infer causal associations between gene expression and disease
    • Schadt, E.E., Lamb, J., Yang, X., et al. (2005). An integrative genomics approach to infer causal associations between gene expression and disease. Nature Genet 37, 710-717.
    • (2005) Nature Genet. , vol.37 , pp. 710-717
    • Schadt, E.E.1    Lamb, J.2    Yang, X.3
  • 17
    • 33644974019 scopus 로고    scopus 로고
    • A fast and flexible statistical model for large-scale population genotype data: Applications to inferring missing genotypes and haplotypic phase
    • Scheet, P., and Stephens, M. (2006). A fast and flexible statistical model for large-scale population genotype data: APPLICATIONS to inferring missing genotypes and haplotypic phase. Am J Hum Genet 78, 629-644.
    • (2006) Am. J. Hum. Genet. , vol.78 , pp. 629-644
    • Scheet, P.1    Stephens, M.2
  • 18
    • 33845646938 scopus 로고    scopus 로고
    • A learning algorithm for adaptive canonical correlation analysis of several data sets
    • Via, J., Santamaria, I., and Perez, J. (2007). A learning algorithm for adaptive canonical correlation analysis of several data sets. Neural Networks 20, 139-152.
    • (2007) Neural Networks , vol.20 , pp. 139-152
    • Via, J.1    Santamaria, I.2    Perez, J.3
  • 20
    • 68249115586 scopus 로고    scopus 로고
    • Extensions of sparse canonical correlation analysis with applications to genomic data
    • Article 28
    • Witten, D.M., and Tibshirani, R.J. (2009). Extensions of sparse canonical correlation analysis with applications to genomic data. Statistical Appl Genetics Molec Biol 8, Article 28.
    • (2009) Statistical Appl. Genetics Molec. Biol. , vol.8
    • Witten, D.M.1    Tibshirani, R.J.2
  • 22
    • 51049106007 scopus 로고    scopus 로고
    • Dimension reduction based on constrained canonical correlation and variable filtering
    • Zhou, J., and He, X. (2008). Dimension reduction based on constrained canonical correlation and variable filtering. Ann Statistics 36, 1649-1668.
    • (2008) Ann. Statistics , vol.36 , pp. 1649-1668
    • Zhou, J.1    He, X.2


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