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Volumn 11, Issue 21, 2011, Pages 4274-4278

Large-scale N-glycoproteome map of rat brain tissue: Simultaneous characterization of insoluble and soluble protein fractions

Author keywords

Glycoproteomics; Hydrazide chemistry; Insoluble and soluble protein fraction; Ionic liquid; N glycoproteome; Rat brain

Indexed keywords

1 BUTYL 3 METHYLIMIDAZOLIUM TETRAFLUOROBORATE; BIOLOGICAL MARKER; GLYCOPROTEIN; PROTEOME; 1-BUTYL-3-METHYLIMIDAZOLIUM TETRAFLUOROBORATE; IMIDAZOLE DERIVATIVE;

EID: 84863802474     PISSN: 16159853     EISSN: 16159861     Source Type: Journal    
DOI: 10.1002/pmic.201000715     Document Type: Article
Times cited : (17)

References (29)
  • 1
    • 20844437106 scopus 로고    scopus 로고
    • Glycans in cancer and inflammation-potential for therapeutics and diagnostics
    • Dube, D. H., Bertozzi, C. R., Glycans in cancer and inflammation-potential for therapeutics and diagnostics. Nat. Rev. Drug Discov. 2005, 4, 477-488..
    • (2005) Nat. Rev. Drug Discov , vol.4 , pp. 477-488
    • Dube, D.H.1    Bertozzi, C.R.2
  • 2
    • 0025804023 scopus 로고
    • Monoclonal antibody therapy of human cancer: taking the HER2 protooncogene to the clinic
    • Shepard, H. M., Lewis, G. D., Sarup, J. C., Fendly, B. M. et al., Monoclonal antibody therapy of human cancer: taking the HER2 protooncogene to the clinic. J. Clin. Immunol. 1991, 11, 117-127..
    • (1991) J. Clin. Immunol , vol.11 , pp. 117-127
    • Shepard, H.M.1    Lewis, G.D.2    Sarup, J.C.3    Fendly, B.M.4
  • 3
    • 23944442772 scopus 로고    scopus 로고
    • The human plasma proteome: analysis of Chinese serum using shotgun strategy
    • He, P., He, H., Dai, J., Wang, Y. et al., The human plasma proteome: analysis of Chinese serum using shotgun strategy. Proteomics. 2005, 5, 3442-3453..
    • (2005) Proteomics , vol.5 , pp. 3442-3453
    • He, P.1    He, H.2    Dai, J.3    Wang, Y.4
  • 4
    • 13644262193 scopus 로고    scopus 로고
    • Proteomic detection of prostate-specific antigen using a serum fractionation procedure: potential implication for new low-abundance cancer biomarkers detection
    • Solassol, J., Marin, P., Demettre, E., Rouanet, P. et al., Proteomic detection of prostate-specific antigen using a serum fractionation procedure: potential implication for new low-abundance cancer biomarkers detection. Anal. Biochem. 2005, 338, 26-31..
    • (2005) Anal. Biochem , vol.338 , pp. 26-31
    • Solassol, J.1    Marin, P.2    Demettre, E.3    Rouanet, P.4
  • 5
    • 53549093906 scopus 로고    scopus 로고
    • Identification of N-linked glycoproteins in human milk by hydrophilic interaction liquid chromatography and mass spectrometry
    • Picariello, G., Ferranti, P., Mamone, G., Roepstorff, P. et al., Identification of N-linked glycoproteins in human milk by hydrophilic interaction liquid chromatography and mass spectrometry. Proteomics 2008, 8, 3833-3847.
    • (2008) Proteomics , vol.8 , pp. 3833-3847
    • Picariello, G.1    Ferranti, P.2    Mamone, G.3    Roepstorff, P.4
  • 6
    • 77950632171 scopus 로고    scopus 로고
    • Simultaneous characterization of glyco- and phospho-proteomes of mouse brain membrane proteome with electrostatic repulsion hydrophilic interaction chromatography (ERLIC)
    • Zhang, H., Guo, T., Li, X., Datta, A. et al., Simultaneous characterization of glyco- and phospho-proteomes of mouse brain membrane proteome with electrostatic repulsion hydrophilic interaction chromatography (ERLIC). Mol. Cell. Proteomics 2010, 9, 635-647.
    • (2010) Mol. Cell. Proteomics , vol.9 , pp. 635-647
    • Zhang, H.1    Guo, T.2    Li, X.3    Datta, A.4
  • 7
    • 0037685263 scopus 로고    scopus 로고
    • Lectin affinity capture, isotope-coded tagging and mass spectrometry to identify N-linked glycoproteins
    • Kaji, H., Saito, H., Yamauchi, Y., Shinkawa, T. et al., Lectin affinity capture, isotope-coded tagging and mass spectrometry to identify N-linked glycoproteins. Nat. Biotechnol. 2003, 21, 667-672..
    • (2003) Nat. Biotechnol , vol.21 , pp. 667-672
    • Kaji, H.1    Saito, H.2    Yamauchi, Y.3    Shinkawa, T.4
  • 8
    • 77952394242 scopus 로고    scopus 로고
    • Concanavalin Aimmobilized magnetic nanoparticles for selective enrichment of glycoproteins and application to glycoproteomics in hepatocelluar carcinoma cell line
    • Tang, J., Liu, Y., Yin, P., Yao, G. et al., Concanavalin Aimmobilized magnetic nanoparticles for selective enrichment of glycoproteins and application to glycoproteomics in hepatocelluar carcinoma cell line. Proteomics 2010, 10, 2000-2014.
    • (2010) Proteomics , vol.10 , pp. 2000-2014
    • Tang, J.1    Liu, Y.2    Yin, P.3    Yao, G.4
  • 9
    • 77953240454 scopus 로고    scopus 로고
    • Precision mapping of an in vivo N-glycoproteome reveals rigid topological and sequence constraints
    • Zielinska, D. F., Gnad, F., Wirśniewski, J. R., Mann, M., Precision mapping of an in vivo N-glycoproteome reveals rigid topological and sequence constraints. Cell 2010, 141, 897-907.
    • (2010) Cell , vol.141 , pp. 897-907
    • Zielinska, D.F.1    Gnad, F.2    Wirśniewski, J.R.3    Mann, M.4
  • 10
    • 0038699625 scopus 로고    scopus 로고
    • Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry
    • Zhang, H., Li, X. J., Martin, D. B., Aebersold, R., Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry. Nat. Biotechnol. 2003, 21, 660-666..
    • (2003) Nat. Biotechnol , vol.21 , pp. 660-666
    • Zhang, H.1    Li, X.J.2    Martin, D.B.3    Aebersold, R.4
  • 11
    • 35649011957 scopus 로고    scopus 로고
    • Exploring the sialiome using titanium dioxide chromatography and mass spectrometry
    • Larsen, M. R., Jensen, S. S., Jakobsen, L. A., Heegaard, N. H., Exploring the sialiome using titanium dioxide chromatography and mass spectrometry. Mol. Cell. Proteomics 2007, 6, 1778-1787.
    • (2007) Mol. Cell. Proteomics , vol.6 , pp. 1778-1787
    • Larsen, M.R.1    Jensen, S.S.2    Jakobsen, L.A.3    Heegaard, N.H.4
  • 12
    • 78649961364 scopus 로고    scopus 로고
    • Selective enrichment of sialic acidcontaining glycopeptides using titanium dioxide chromatography with analysis by HILIC and mass spectrometry
    • Palmisano, G., Lendal, S. E., Engholm-Keller, K., Leth-Larsen, R. et al., Selective enrichment of sialic acidcontaining glycopeptides using titanium dioxide chromatography with analysis by HILIC and mass spectrometry. Nat. Protoc. 2010, 5, 1974-1982..
    • (2010) Nat. Protoc , vol.5 , pp. 1974-1982
    • Palmisano, G.1    Lendal, S.E.2    Engholm-Keller, K.3    Leth-Larsen, R.4
  • 13
    • 60549116901 scopus 로고    scopus 로고
    • Identification of secreted proteins regulated by cAMP in glioblastoma cells using glycopeptide capture and label-free quantification
    • Hill, J. J., Moreno, M. J., Lam, J. C. Y., Haqqani, A. S. et al., Identification of secreted proteins regulated by cAMP in glioblastoma cells using glycopeptide capture and label-free quantification. Proteomics 2009, 9, 535-549.
    • (2009) Proteomics , vol.9 , pp. 535-549
    • Hill, J.J.1    Moreno, M.J.2    Lam, J.C.Y.3    Haqqani, A.S.4
  • 14
    • 78149399037 scopus 로고    scopus 로고
    • Mapping tissuespecific expression of extracellular proteins using systematic glycoproteomic analysis of different mouse tissues
    • Tian, Y., Spratt, K., Kemp, C., Zhang, H., Mapping tissuespecific expression of extracellular proteins using systematic glycoproteomic analysis of different mouse tissues. J. Proteome Res. 2010, 9, 5837-5847..
    • (2010) J Proteome Res , vol.9 , pp. 5837-5847
    • Tian, Y.1    Spratt, K.2    Kemp, C.3    Zhang, H.4
  • 15
    • 61849130124 scopus 로고    scopus 로고
    • Rat liver membrane glycoproteome: enrichment by phase partitioning and glycoprotein capture
    • Lee, A., Kolarich, D., Haynes, P. A., Jensen, P. et al., Rat liver membrane glycoproteome: enrichment by phase partitioning and glycoprotein capture. J. Proteome Res. 2009, 8, 770-781..
    • (2009) J. Proteome Res , vol.8 , pp. 770-781
    • Lee, A.1    Kolarich, D.2    Haynes, P.A.3    Jensen, P.4
  • 16
    • 2142700917 scopus 로고    scopus 로고
    • Interhelical hydrogen bonds in transmembrane region are important for function and stability of Ca21-transporting ATPase
    • Adamian, L., Liang, J., Interhelical hydrogen bonds in transmembrane region are important for function and stability of Ca21-transporting ATPase. Cell Biochem. Biophys. 2003, 39, 1-12..
    • (2003) Cell Biochem Biophys , vol.39 , pp. 1-12
    • Adamian, L.1    Liang, J.2
  • 17
    • 68549135368 scopus 로고    scopus 로고
    • Mass spectrometry (LC-MS/MS) site-mapping of N-glycosylated membrane proteins for breast cancer biomarkers
    • Whelan, S. A., Lu, M., He, J., Yan, W. et al., Mass spectrometry (LC-MS/MS) site-mapping of N-glycosylated membrane proteins for breast cancer biomarkers. J. Proteome Res. 2009, 8, 4151-4160..
    • (2009) J. Proteome Res , vol.8 , pp. 4151-4160
    • Whelan, S.A.1    Lu, M.2    He, J.3    Yan, W.4
  • 18
    • 0037021251 scopus 로고    scopus 로고
    • Lung tumour markers in oncology practice: a study of TPA and CA125
    • Buccheri, G., Ferrigno, D., Lung tumour markers in oncology practice: a study of TPA and CA125. Br. J. Cancer. 2002, 87, 1112-1118..
    • (2002) Br J. Cancer , vol.87 , pp. 1112-1118
    • Buccheri, G.1    Ferrigno, D.2
  • 19
    • 3042815945 scopus 로고    scopus 로고
    • Plasma cell membrane glycoprotein 1 (PC-1): a marker of insulin resistance in obesity, uremia and diabetes mellitus
    • Stefanović, V., Antić, S., Plasma cell membrane glycoprotein 1 (PC-1): a marker of insulin resistance in obesity, uremia and diabetes mellitus. Clin. Lab. 2004, 50, 271-278..
    • (2004) Clin Lab , vol.50 , pp. 271-278
    • Stefanović, V.1    Antić, S.2
  • 20
    • 0942276251 scopus 로고    scopus 로고
    • A detergent- and cyanogen bromide-free method for integral membrane proteomics: application to Halobacterium purple membranes and the human epidermal membrane proteome
    • Blonder, J., Conrads, T. P., Yu, L. R., Terunuma, A. et al., A detergent- and cyanogen bromide-free method for integral membrane proteomics: application to Halobacterium purple membranes and the human epidermal membrane proteome. Proteomics 2004, 4, 31-45.
    • (2004) Proteomics , vol.4 , pp. 31-45
    • Blonder, J.1    Conrads, T.P.2    Yu, L.R.3    Terunuma, A.4
  • 21
    • 33847681015 scopus 로고    scopus 로고
    • Comparison of SDS- and methanol-assisted protein solubilization and digestion methods for Escherichia coli membrane proteome analysis by 2-D LC-MS/MS
    • Zhang, N., Chen, R., Young, N., Wishart, D. et al., Comparison of SDS- and methanol-assisted protein solubilization and digestion methods for Escherichia coli membrane proteome analysis by 2-D LC-MS/MS. Proteomics 2007, 7, 484-493.
    • (2007) Proteomics , vol.7 , pp. 484-492
    • Zhang, N.1    Chen, R.2    Young, N.3    Wishart, D.4
  • 22
    • 39749125069 scopus 로고    scopus 로고
    • Phase transfer surfactant-aided trypsin digestion for membrane proteome analysis
    • Masuda, T., Tomita, M., Ishihama, Y., Phase transfer surfactant-aided trypsin digestion for membrane proteome analysis. J. Proteome Res. 2008, 7, 731-740..
    • (2008) J Proteome Res , vol.7 , pp. 731-740
    • Masuda, T.1    Tomita, M.2    Ishihama, Y.3
  • 23
    • 79954442431 scopus 로고    scopus 로고
    • Ionic liquid 1-butyl-3-methyl imidazolium tetrafluoroborate for shotgun membrane proteomics
    • Sun, L., Tao, D., Han, B., Ma, J. et al., Ionic liquid 1-butyl-3-methyl imidazolium tetrafluoroborate for shotgun membrane proteomics. Anal. Bioanal. Chem. 2011, 399, 3387-3397..
    • (2011) Anal. Bioanal. Chem , vol.399 , pp. 3387-3397
    • Sun, L.1    Tao, D.2    Han, B.3    Ma, J.4
  • 24
    • 5644300853 scopus 로고    scopus 로고
    • Altered P-glycoprotein expression in AIDS patients with HIV encephalitis
    • Langford, D., Grigorian, A., Hurford, R., Adame, A. et al., Altered P-glycoprotein expression in AIDS patients with HIV encephalitis. J. Neuropathol. Exp. Neurol. 2004, 63, 1038-1047..
    • (2004) J. Neuropathol. Exp. Neurol , vol.63 , pp. 1038-1047
    • Langford, D.1    Grigorian, A.2    Hurford, R.3    Adame, A.4
  • 25
    • 0036841686 scopus 로고    scopus 로고
    • Transport of paclitaxel (Taxol) across the blood-brain barrier in vitro and in vivo
    • Fellner, S., Bauer, B., Miller, D. S., Schaffrik, M., Transport of paclitaxel (Taxol) across the blood-brain barrier in vitro and in vivo. J. Clin. Invest. 2002, 110, 1309-1318..
    • (2002) J. Clin. Invest , vol.110 , pp. 1309-1318
    • Fellner, S.1    Bauer, B.2    Miller, D.S.3    Schaffrik, M.4
  • 26
    • 0032840009 scopus 로고    scopus 로고
    • Synaptophysin immunoreactivity in temporal lobe epilepsy-associated hippocampal sclerosis
    • Looney, M. R., Dohan, F. J., Davies, K. G., Seidenberg, G. et al., Synaptophysin immunoreactivity in temporal lobe epilepsy-associated hippocampal sclerosis. Acta Neuropathol. 1999, 98, 179-185..
    • (1999) Acta Neuropathol , vol.98 , pp. 179-185
    • Looney, M.R.1    Dohan, F.J.2    Davies, K.G.3    Seidenberg, G.4
  • 27
    • 0030872413 scopus 로고    scopus 로고
    • Loss of the presynaptic vesicle protein synaptophysin in hippocampus correlates with cognitive decline in Alzheimer disease
    • Sze, C. I., Troncoso, J. C., Kawas, C., Mouton, P. et al., Loss of the presynaptic vesicle protein synaptophysin in hippocampus correlates with cognitive decline in Alzheimer disease. J. Neuropathol. Exp. Neurol. 1997, 56, 933-944..
    • (1997) J. Neuropathol. Exp. Neurol , vol.56 , pp. 933-944
    • Sze, C.I.1    Troncoso, J.C.2    Kawas, C.3    Mouton, P.4
  • 28
    • 80051655470 scopus 로고    scopus 로고
    • Quantitative N-linked glycoproteomics of myocardial ischemia/reperfusion injury reveals early remodeling in the extracellular environment
    • DOI: 10.1074/mcp.M110.006833.
    • Parker, B. L., Palmisano, G., Edwards, A. V., White, M. Y. et al., Quantitative N-linked glycoproteomics of myocardial ischemia/reperfusion injury reveals early remodeling in the extracellular environment. Mol. Cell. Proteomics. 2011. DOI: 10.1074/mcp.M110.006833.
    • (2011) Mol. Cell. Proteomics
    • Parker, B.L.1    Palmisano, G.2    Edwards, A.V.3    White, M.Y.4
  • 29
    • 56449114837 scopus 로고    scopus 로고
    • Comparisons of mass spectrometry compatible surfactants for global analysis of the mammalian brain proteome
    • Chen, E. I., McClatchy, D., Park, S. K., Yates, J. R., Comparisons of mass spectrometry compatible surfactants for global analysis of the mammalian brain proteome. Anal. Chem. 2008, 80, 8694-8701..
    • (2008) Anal. Chem , vol.80 , pp. 8694-8701
    • Chen, E.I.1    McClatchy, D.2    Park, S.K.3    Yates, J.R.4


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