Limited geographic distribution of certain strains of the bioluminescent symbiont Photobacterium leiognathi

FEMS Microbiology Ecology

Volumn 81, Issue 2, 2012, Pages 355-363

  Urbanczyk, Henryk ^a   Kiwaki, Naomi ^a   Furukawa, Takashi ^a   Iwatsuki, Yukio ^a  

^a UNIVERSITY OF MIYAZAKI   (Japan)

Author keywords

Luminous bacteria; Photobacterium; Symbiosis

Indexed keywords

BACTERIAL DNA;

BACTERIUM; BIOLUMINESCENCE; COLONIZATION; GEOGRAPHICAL DISTRIBUTION; PERCIFORM; SPECIMEN BANK; SYMBIONT; SYMBIOSIS;

ANIMAL; ARTICLE; GENETICS; GROWTH, DEVELOPMENT AND AGING; ISOLATION AND PURIFICATION; JAPAN; LUMINESCENCE; MICROBIOLOGY; OPERON; PERCIFORMES; PHOTOBACTERIUM; PHYLOGENY; SYMBIOSIS;

ANIMALS; DNA, BACTERIAL; JAPAN; LUMINESCENCE; OPERON; PERCIFORMES; PHOTOBACTERIUM; PHYLOGENY; SYMBIOSIS;

JAPAN; PACIFIC OCEAN; PACIFIC OCEAN (WEST);

ANIMALIA; BACTERIA (MICROORGANISMS); PHOTOBACTERIUM; PHOTOBACTERIUM LEIOGNATHI; SECUTOR INDICIUS;

EID: 84863784149     PISSN: 01686496     EISSN: 15746941     Source Type: Journal    
DOI: 10.1111/j.1574-6941.2012.01353.x     Document Type: Article

References (35)

1. Ast JC & Dunlap PV (2004) Phylogenetic analysis of the lux operon distinguishes two evolutionarily distinct clades of Photobacterium leiognathi. Arch Microbiol 181: 352-361.
2. Ast JC & Dunlap PV (2005) Phylogenetic resolution and habitat specificity of the Photobacterium phosphoreum species group. Environ Microbiol 7: 1641-1654.
3. Ast JC, Urbanczyk H & Dunlap PV (2007a) Natural merodiploidy of the lux-rib operon of Photobacterium leiognathi from coastal waters of Honshu, Japan. J Bacteriol 189: 6148-6158.
4. Ast JC, Cleenwerck I, Engelbeen K, Urbanczyk H, Thompson FL, De Vos P & Dunlap PV (2007b) Photobacterium kishitanii sp. nov., a luminous marine bacterium symbiotic with deep-sea fishes. Int J Syst Evol Microbiol 57: 2073-2078.
5. Boisvert H, Chatelain R & Bassot J-M (1967) Étude d'un Photobacterium isolé de l'organe lumineux de poissons Leiognathidae. Ann Inst Pasteur (Paris) 112: 520-524.
6. Bose JL, Wollenberg MS, Colton DM, Mandel MJ, Septer AN, Dunn AK & Stabb EV (2011) Contribution of rapid evolution of the luxR-luxI intergenic region to the diverse bioluminescence outputs of Vibrio fischeri strains isolated from different environments. Appl Environ Microbiol 77: 2445-2457.
7. Bourgois JJ, Sluse FE, Baguet F & Mallefet J (2001) Kinetics of light emission and oxygen consumption by bioluminescent bacteria. J Bioenerg Biomembr 33: 353-363.
8. Chakrabarty P, Davis MP, Smith WL, Berquist R, Gledhill KM, Frank LR & Sparks JS (2011) Evolution of the light organ system in ponyfishes (Teleostei: Leiognathidae). J Morphol 272: 704-721.
9. Dunlap PV (1984) Physiological and morphological state of the symbiotic bacteria from light organs of ponyfish. Biol Bull 167: 410-425.
10. Dunlap PV (1985) Osmotic control of luminescence and growth in Photobacterium leiognathi from ponyfish light organs. Arch Microbiol 141: 44-50.
11. Dunlap PV (2009) Bioluminescence, microbial. Encyclopedia of Microbiology (Schaechter M, ed), pp. 45-61. Elsevier, Oxford.
12. Dunlap PV & Ast JC (2005) Genomic and phylogenetic characterization of the luminous bacteria symbiotic with the deep-sea fish Chlorophthalmus albatrossis (Aulopiformes: Chlorophthalmidae). Appl Environ Microbiol 71: 930-939.
13. Dunlap PV & Kita-Tsukamoto K (2006) Luminous bacteria. The Prokaryotes: A Handbook on the Biology of Bacteria, Vol. 3 (Dworkin M, Falkow S, Rosenberg E, Schleifer KH & Stackebrandt E, eds), pp. 863-892. Springer, New York, NY.
14. Dunlap PV & Nakamura M (2011) Functional morphology of the luminescence system of Siphamia versicolor (Perciformes: Apogonidae), a bacterially luminous coral reef fish. J Morphol 272: 897-909.
15. Dunlap PV, Jiemjit A, Ast JC, Pearce MM, Marques RR & Lavilla-Pitogo CR (2004) Genomic polymorphism in symbiotic populations of Photobacterium leiognathi. Environ Microbiol 6: 145-158.
16. Dunlap PV, Ast JC, Kimura S, Fukui A, Yoshino T & Endo H (2007) Phylogenetic analysis of host-symbiont specificity and codivergence in bioluminescent symbioses. Cladistics 23: 507-523.
17. Dunlap PV, Davis KM, Tomiyama S, Fujino M & Fukui A (2008) Developmental and microbiological analysis of the inception of bioluminescent symbiosis in the marine fish Nuchequula nuchalis (Perciformes: Leiognathidae). Appl Environ Microbiol 74: 7471-7481.
18. Johnsen S, Widder EA & Mobley CD (2004) Propagation and perception of bioluminescence: factors affecting counterillumination as a cryptic strategy. Biol Bull 207: 1-16.
19. Kaeding AJ, Ast JC, Pearce MM, Urbanczyk H, Kimura S, Endo H, Nakamura M & Dunlap PV (2007) Phylogenetic diversity and co-symbiosis in the bioluminescent symbioses of Photobacterium mandapamensis. Appl Environ Microbiol 73: 3173-3182.
20. Kimura S, Dunlap PV, Peristiwady T & Lavilla-Pitogo CR (2003) The complex (Perciformes: Leiognathidae) with the description of a new species. Ichthyol Res 50: 221-232.
21. Kimura S, Houki S, Yamada M & Motomura H (2005) First record of a ponyfish, Secutor indicius, from Japan (Perciformes: Leiognathidae). Jpn J Ichtyol 55: 111-114.
22. Lin JW, Chao YF & Weng S-F (2001) Riboflavin synthesis genes ribE, ribB, ribH, ribA reside in the lux operon of Photobacterium leiognathi. Biochem Biophys Res Commun 284: 587-595.
23. Mandel MJ, Wollenberg MS, Stabb EV, Visick KL & Ruby EG (2009) A single regulatory gene is sufficient to alter bacterial host range. Nature 458: 215-218.
24. Meighen EM (1991) Molecular biology of bacterial bioluminescence. Microbiol Rev 55: 123-141.
25. Nelson EJ, Tunsjø HS, Fidopiastis PM, Sørum H & Ruby EG (2007) A novel lux operon in the cryptically bioluminescent fish pathogen Vibrio salmonicida is associated with virulence. Appl Environ Microbiol 73: 1825-1833.
26. Reichelt JL & Baumann P (1973) Taxonomy of the marine, luminous bacteria. Arch Microbiol 94: 283-330.
27. Reichelt JL & Baumman P (1975) Photobacterium mandapamensis Hendrie et al., a later subjective synonym of Photobacterium leiognathi Boisvert et al. Int J Syst Bacteriol 25: 208-209.
28. Sparks JS, Dunlap PV & Smith WL (2005) Evolution and diversification of a sexually dimorphic luminescent system in ponyfishes (Teleostei: Leiognathidae), including diagnoses for two new genera. Cladistics 21: 305-327.
29. Stabb EV, Butler MS & Adin DM (2004) Correlation between osmolarity and luminescence of symbiotic Vibrio fischeri strain ES114. J Bacteriol 186: 2906-2908.
30. Swofford DL (2003) PAUP*: Phylogenetic Analysis Using Parsimony (*and Other Methods), Version 4, Sinauer Associates, Sunderland, MA.
31. Tomczak M & Godfrey JS (2003) Regional Oceanography: An Introduction, 2nd edn. Daya Publishing House, Delhi, India.
32. Urbanczyk H, Ast JC, Kaeding AJ, Oliver JD & Dunlap PV (2008) Phylogenetic analysis of the incidence of lux gene horizontal transfer in Vibrionaceae. J Bacteriol 190: 3494-3504.
33. Urbanczyk H, Ast JC & Dunlap PV (2011) Phylogeny, genomics, and symbiosis of Photobacterium. FEMS Microbiol Rev 35: 324-342.
34. Widder EA (2010) Bioluminescence in the ocean: origins of biological, chemical, and ecological diversity. Science 328: 704-708.
35. Wimpee CF, Nadeau TL & Nealson KH (1999) Development of species-specific hybridization probes for marine luminous bacteria using in vitro DNA amplification. Appl Environ Microbiol 57: 1319-1324.