-
1
-
-
0022377314
-
The nucleoprotein as a possible major factor in determining host specificity of influenza H3N2 viruses
-
Scholtissek C, Burger H, Kistner O, Shortridge KF, (1985) The nucleoprotein as a possible major factor in determining host specificity of influenza H3N2 viruses. Virology 147: 287-294.
-
(1985)
Virology
, vol.147
, pp. 287-294
-
-
Scholtissek, C.1
Burger, H.2
Kistner, O.3
Shortridge, K.F.4
-
2
-
-
33646374959
-
Molecular virology: was the 1918 pandemic caused by a bird flu?
-
discussion E9-10
-
Gibbs MJ, Gibbs AJ, (2006) Molecular virology: was the 1918 pandemic caused by a bird flu? Nature 440: E8; discussion E9-10.
-
(2006)
Nature
, vol.440
-
-
Gibbs, M.J.1
Gibbs, A.J.2
-
3
-
-
67650407532
-
Antigenic and genetic characteristics of swine-origin 2009 A(H1N1) influenza viruses circulating in humans
-
Garten RJ, Davis CT, Russell CA, Shu B, Lindstrom S, et al. (2009) Antigenic and genetic characteristics of swine-origin 2009 A(H1N1) influenza viruses circulating in humans. Science 325: 197-201.
-
(2009)
Science
, vol.325
, pp. 197-201
-
-
Garten, R.J.1
Davis, C.T.2
Russell, C.A.3
Shu, B.4
Lindstrom, S.5
-
4
-
-
67649538978
-
Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic
-
Smith GJ, Vijaykrishna D, Bahl J, Lycett SJ, Worobey M, et al. (2009) Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic. Nature 459: 1122-1125.
-
(2009)
Nature
, vol.459
, pp. 1122-1125
-
-
Smith, G.J.1
Vijaykrishna, D.2
Bahl, J.3
Lycett, S.J.4
Worobey, M.5
-
5
-
-
0019417811
-
Evidence for the natural transmission of influenza A virus from wild ducts to swine and its potential importance for man
-
Pensaert M, Ottis K, Vandeputte J, Kaplan MM, Bachmann PA, (1981) Evidence for the natural transmission of influenza A virus from wild ducts to swine and its potential importance for man. Bull World Health Organ 59: 75-78.
-
(1981)
Bull World Health Organ
, vol.59
, pp. 75-78
-
-
Pensaert, M.1
Ottis, K.2
Vandeputte, J.3
Kaplan, M.M.4
Bachmann, P.A.5
-
6
-
-
0018144758
-
On the origin of the human influenza virus subtypes H2N2 and H3N2
-
Scholtissek C, Rohde W, Von Hoyningen V, Rott R, (1978) On the origin of the human influenza virus subtypes H2N2 and H3N2. Virology 87: 13-20.
-
(1978)
Virology
, vol.87
, pp. 13-20
-
-
Scholtissek, C.1
Rohde, W.2
Von Hoyningen, V.3
Rott, R.4
-
7
-
-
27144431628
-
Transmission of equine influenza virus to dogs
-
Crawford PC, Dubovi EJ, Castleman WL, Stephenson I, Gibbs EP, et al. (2005) Transmission of equine influenza virus to dogs. Science 310: 482-485.
-
(2005)
Science
, vol.310
, pp. 482-485
-
-
Crawford, P.C.1
Dubovi, E.J.2
Castleman, W.L.3
Stephenson, I.4
Gibbs, E.P.5
-
8
-
-
0346373759
-
Unifying the epidemiological and evolutionary dynamics of pathogens
-
Grenfell BT, Pybus OG, Gog JR, Wood JL, Daly JM, et al. (2004) Unifying the epidemiological and evolutionary dynamics of pathogens. Science 303: 327-332.
-
(2004)
Science
, vol.303
, pp. 327-332
-
-
Grenfell, B.T.1
Pybus, O.G.2
Gog, J.R.3
Wood, J.L.4
Daly, J.M.5
-
9
-
-
77953755568
-
Intra- and interhost evolutionary dynamics of equine influenza virus
-
Murcia PR, Baillie GJ, Daly J, Elton D, Jervis C, et al. (2010) Intra- and interhost evolutionary dynamics of equine influenza virus. J Virol 84: 6943-6954.
-
(2010)
J Virol
, vol.84
, pp. 6943-6954
-
-
Murcia, P.R.1
Baillie, G.J.2
Daly, J.3
Elton, D.4
Jervis, C.5
-
10
-
-
77951432232
-
Intrahost evolutionary dynamics of canine influenza virus in naive and partially immune dogs
-
Hoelzer K, Murcia PR, Baillie GJ, Wood JL, Metzger SM, et al. (2010) Intrahost evolutionary dynamics of canine influenza virus in naive and partially immune dogs. J Virol 84: 5329-5335.
-
(2010)
J Virol
, vol.84
, pp. 5329-5335
-
-
Hoelzer, K.1
Murcia, P.R.2
Baillie, G.J.3
Wood, J.L.4
Metzger, S.M.5
-
11
-
-
70349308777
-
Within-host variation of avian influenza viruses
-
Iqbal M, Xiao H, Baillie G, Warry A, Essen SC, et al. (2009) Within-host variation of avian influenza viruses. Philos Trans R Soc Lond B Biol Sci 364: 2739-2747.
-
(2009)
Philos Trans R Soc Lond B Biol Sci
, vol.364
, pp. 2739-2747
-
-
Iqbal, M.1
Xiao, H.2
Baillie, G.3
Warry, A.4
Essen, S.C.5
-
12
-
-
66149093121
-
Different evolutionary trajectories of European avian-like and classical swine H1N1 influenza A viruses
-
Dunham EJ, Dugan VG, Kaser EK, Perkins SE, Brown IH, et al. (2009) Different evolutionary trajectories of European avian-like and classical swine H1N1 influenza A viruses. J Virol 83: 5485-5494.
-
(2009)
J Virol
, vol.83
, pp. 5485-5494
-
-
Dunham, E.J.1
Dugan, V.G.2
Kaser, E.K.3
Perkins, S.E.4
Brown, I.H.5
-
13
-
-
0034701743
-
The epidemiology and evolution of influenza viruses in pigs
-
Brown IH, (2000) The epidemiology and evolution of influenza viruses in pigs. Vet Microbiol 74: 29-46.
-
(2000)
Vet Microbiol
, vol.74
, pp. 29-46
-
-
Brown, I.H.1
-
14
-
-
0023082135
-
The structure and function of the hemagglutinin membrane glycoprotein of influenza virus
-
Wiley DC, Skehel JJ, (1987) The structure and function of the hemagglutinin membrane glycoprotein of influenza virus. Annu Rev Biochem 56: 365-394.
-
(1987)
Annu Rev Biochem
, vol.56
, pp. 365-394
-
-
Wiley, D.C.1
Skehel, J.J.2
-
15
-
-
0025941869
-
Single amino acid substitutions in the hemagglutinin can alter the host range and receptor binding properties of H1 strains of influenza A virus
-
Aytay S, Schulze IT, (1991) Single amino acid substitutions in the hemagglutinin can alter the host range and receptor binding properties of H1 strains of influenza A virus. J Virol 65: 3022-3028.
-
(1991)
J Virol
, vol.65
, pp. 3022-3028
-
-
Aytay, S.1
Schulze, I.T.2
-
16
-
-
0031820967
-
The role of influenza A virus hemagglutinin residues 226 and 228 in receptor specificity and host range restriction
-
Vines A, Wells K, Matrosovich M, Castrucci MR, Ito T, et al. (1998) The role of influenza A virus hemagglutinin residues 226 and 228 in receptor specificity and host range restriction. J Virol 72: 7626-7631.
-
(1998)
J Virol
, vol.72
, pp. 7626-7631
-
-
Vines, A.1
Wells, K.2
Matrosovich, M.3
Castrucci, M.R.4
Ito, T.5
-
17
-
-
80051569372
-
Experimental transmission of avian-like swine H1N1 influenza virus between immunologically naive and vaccinated pigs
-
Lloyd LE, Jonczyk M, Jervis CM, Flack DJ, Lyall J, et al. (2011) Experimental transmission of avian-like swine H1N1 influenza virus between immunologically naive and vaccinated pigs. Influenza Other Respi Viruses 5: 357-364.
-
(2011)
Influenza Other Respi Viruses
, vol.5
, pp. 357-364
-
-
Lloyd, L.E.1
Jonczyk, M.2
Jervis, C.M.3
Flack, D.J.4
Lyall, J.5
-
18
-
-
0035969778
-
The predicted antigenicity of the haemagglutinin of the 1918 Spanish influenza pandemic suggests an avian origin
-
Brownlee GG, Fodor E, (2001) The predicted antigenicity of the haemagglutinin of the 1918 Spanish influenza pandemic suggests an avian origin. Philos Trans R Soc Lond B Biol Sci 356: 1871-1876.
-
(2001)
Philos Trans R Soc Lond B Biol Sci
, vol.356
, pp. 1871-1876
-
-
Brownlee, G.G.1
Fodor, E.2
-
19
-
-
0020416123
-
The antigenic structure of the influenza virus A/PR/8/34 hemagglutinin (H1 subtype)
-
Caton AJ, Brownlee GG, Yewdell JW, Gerhard W, (1982) The antigenic structure of the influenza virus A/PR/8/34 hemagglutinin (H1 subtype). Cell 31: 417-427.
-
(1982)
Cell
, vol.31
, pp. 417-427
-
-
Caton, A.J.1
Brownlee, G.G.2
Yewdell, J.W.3
Gerhard, W.4
-
20
-
-
70350595871
-
Hemagglutinin receptor binding avidity drives influenza A virus antigenic drift
-
Hensley SE, Das SR, Bailey AL, Schmidt LM, Hickman HD, et al. (2009) Hemagglutinin receptor binding avidity drives influenza A virus antigenic drift. Science 326: 734-736.
-
(2009)
Science
, vol.326
, pp. 734-736
-
-
Hensley, S.E.1
Das, S.R.2
Bailey, A.L.3
Schmidt, L.M.4
Hickman, H.D.5
-
21
-
-
79251480393
-
Glycosylation focuses sequence variation in the influenza A virus H1 hemagglutinin globular domain
-
Das SR, Puigbo P, Hensley SE, Hurt DE, Bennink JR, et al. (2010) Glycosylation focuses sequence variation in the influenza A virus H1 hemagglutinin globular domain. PLoS Pathog 6: e1001211.
-
(2010)
PLoS Pathog
, vol.6
-
-
Das, S.R.1
Puigbo, P.2
Hensley, S.E.3
Hurt, D.E.4
Bennink, J.R.5
-
22
-
-
78651232475
-
Dynamics of glycoprotein charge in the evolutionary history of human influenza
-
Arinaminpathy N, Grenfell B, (2010) Dynamics of glycoprotein charge in the evolutionary history of human influenza. PLoS One 5: e15674.
-
(2010)
PLoS One
, vol.5
-
-
Arinaminpathy, N.1
Grenfell, B.2
-
23
-
-
79953664745
-
A Bayesian approach to analyse genetic variation within RNA viral populations
-
McKinley TJ, Murcia PR, Gog JR, Varela M, Wood JL, (2011) A Bayesian approach to analyse genetic variation within RNA viral populations. PLoS Comput Biol 7: e1002027.
-
(2011)
PLoS Comput Biol
, vol.7
-
-
McKinley, T.J.1
Murcia, P.R.2
Gog, J.R.3
Varela, M.4
Wood, J.L.5
-
24
-
-
80053948552
-
Molecular evolution analysis of the human immunodeficiency virus type 1 envelope in simian/human immunodeficiency virus-infected macaques: implications for challenge dose selection
-
Varela M, Landskron L, Lai RP, McKinley TJ, Bogers WM, et al. (2011) Molecular evolution analysis of the human immunodeficiency virus type 1 envelope in simian/human immunodeficiency virus-infected macaques: implications for challenge dose selection. J Virol 85: 10332-10345.
-
(2011)
J Virol
, vol.85
, pp. 10332-10345
-
-
Varela, M.1
Landskron, L.2
Lai, R.P.3
McKinley, T.J.4
Bogers, W.M.5
-
25
-
-
30844446303
-
Long-term transmission of defective RNA viruses in humans and Aedes mosquitoes
-
Aaskov J, Buzacott K, Thu HM, Lowry K, Holmes EC, (2006) Long-term transmission of defective RNA viruses in humans and Aedes mosquitoes. Science 311: 236-238.
-
(2006)
Science
, vol.311
, pp. 236-238
-
-
Aaskov, J.1
Buzacott, K.2
Thu, H.M.3
Lowry, K.4
Holmes, E.C.5
-
26
-
-
67249108203
-
Genetic trans-complementation establishes a new model for influenza virus RNA transcription and replication
-
Jorba N, Coloma R, Ortin J, (2009) Genetic trans-complementation establishes a new model for influenza virus RNA transcription and replication. PLoS Pathog 5: e1000462.
-
(2009)
PLoS Pathog
, vol.5
-
-
Jorba, N.1
Coloma, R.2
Ortin, J.3
-
27
-
-
33645986456
-
Host species barriers to influenza virus infections
-
Kuiken T, Holmes EC, McCauley J, Rimmelzwaan GF, Williams CS, et al. (2006) Host species barriers to influenza virus infections. Science 312: 394-397.
-
(2006)
Science
, vol.312
, pp. 394-397
-
-
Kuiken, T.1
Holmes, E.C.2
McCauley, J.3
Rimmelzwaan, G.F.4
Williams, C.S.5
-
28
-
-
0035559445
-
Universal primer set for the full-length amplification of all influenza A viruses
-
Hoffmann E, Stech J, Guan Y, Webster RG, Perez DR, (2001) Universal primer set for the full-length amplification of all influenza A viruses. Arch Virol 146: 2275-2289.
-
(2001)
Arch Virol
, vol.146
, pp. 2275-2289
-
-
Hoffmann, E.1
Stech, J.2
Guan, Y.3
Webster, R.G.4
Perez, D.R.5
-
29
-
-
45949107473
-
Recent developments in the MAFFT multiple sequence alignment program
-
Katoh K, Toh H, (2008) Recent developments in the MAFFT multiple sequence alignment program. Brief Bioinform 9: 286-298.
-
(2008)
Brief Bioinform
, vol.9
, pp. 286-298
-
-
Katoh, K.1
Toh, H.2
-
30
-
-
77950806408
-
New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0
-
Guindon S, Dufayard JF, Lefort V, Anisimova M, Hordijk W, et al. (2010) New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst Biol 59: 307-321.
-
(2010)
Syst Biol
, vol.59
, pp. 307-321
-
-
Guindon, S.1
Dufayard, J.F.2
Lefort, V.3
Anisimova, M.4
Hordijk, W.5
-
31
-
-
14644397888
-
RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees
-
Stamatakis A, Ludwig T, Meier H, (2005) RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees. Bioinformatics 21: 456-463.
-
(2005)
Bioinformatics
, vol.21
, pp. 456-463
-
-
Stamatakis, A.1
Ludwig, T.2
Meier, H.3
-
32
-
-
15844406550
-
HyPhy: hypothesis testing using phylogenies
-
Pond SL, Frost SD, Muse SV, (2005) HyPhy: hypothesis testing using phylogenies. Bioinformatics 21: 676-679.
-
(2005)
Bioinformatics
, vol.21
, pp. 676-679
-
-
Pond, S.L.1
Frost, S.D.2
Muse, S.V.3
|