Alignment of 3-D optical coherence tomography scans to correct eye movement using a particle filtering

IEEE Transactions on Medical Imaging

Volumn 31, Issue 7, 2012, Pages 1337-1345

  Xu, Juan ^a   Ishikawa, Hiroshi ^a,b   Wollstein, Gadi ^a   Kagemann, Larry ^a,b   Schuman, Joel S ^a,b  

^a UNIVERSITY OF PITTSBURGH MEDICAL CENTER   (United States)

^b University of Pittsburgh   (United States)

Author keywords

Eye movement correction; particle filtering; retinal image processing; three dimensional optical coherence tomography (3 D OCT)

Indexed keywords

DATA SETS; EXPERIMENTAL DATA; IMAGE ANALYSIS AND INTERPRETATION; MOVEMENT ARTIFACTS; MOVEMENT CORRECTION; OBJECTIVE EVALUATION; PARTICLE FILTERING; PARTICLE FILTERING ALGORITHMS; PROBABILITY DENSITIES; REFERENCE IMAGE; SENSITIVITY AND SPECIFICITY; SIMULATED DATA; STATE SPACE; SUBJECTIVE EVALUATIONS; TRACKING PROBLEM; VOLUME DATA;

ALGORITHMS; ALIGNMENT; EYE MOVEMENTS; IMAGE PROCESSING; OPTICAL TOMOGRAPHY; SIGNAL FILTERING AND PREDICTION; TARGET TRACKING;

THREE DIMENSIONAL;

ALGORITHM; ARTICLE; ARTIFACT; CASE CONTROL STUDY; COMPUTER SIMULATION; EYE MOVEMENT; FACTUAL DATABASE; GLAUCOMA; HISTOLOGY; HUMAN; METHODOLOGY; OPTICAL COHERENCE TOMOGRAPHY; PATHOLOGY; PATHOPHYSIOLOGY; PHYSIOLOGY; RETINA; SENSITIVITY AND SPECIFICITY; THREE DIMENSIONAL IMAGING;

ALGORITHMS; ARTIFACTS; CASE-CONTROL STUDIES; COMPUTER SIMULATION; DATABASES, FACTUAL; EYE MOVEMENTS; GLAUCOMA; HUMANS; IMAGING, THREE-DIMENSIONAL; RETINA; SENSITIVITY AND SPECIFICITY; TOMOGRAPHY, OPTICAL COHERENCE;

EID: 84863429936     PISSN: 02780062     EISSN: None     Source Type: Journal    
DOI: 10.1109/TMI.2011.2182618     Document Type: Article

References (20)

1. J. S. Schuman, "Spectral domain optical coherence tomography for glaucoma," Trans. Am. Ophthalmol. Soc., vol. 106, pp. 426-428, 2008.
2. Y. Picard and C. Thompson, "Motion correction of PET images using multiple acquisition frames," IEEE Trans. Med. Imag., vol. 16, no. 2, pp. 137-144, Apr. 1997. (Pubitemid 127762925)
3. R. Fulton, S. Meikle, S. Eberl, J. Pfeiffer, C. Constable, and M. Fulham, "Correction for head movements in positron emission tomography using an optical motion-tracking system," IEEE Trans. Nucl. Sci., vol. 49, no. 1, pp. 116-123, Feb. 2002. (Pubitemid 34658203)
4. P. Buhler, U. Just, E. Will, J. Kotzerke, and J. Hoff, "An accurate method for correction of head movement in PET," IEEE Trans. Med. Imag., vol. 23, no. 9, pp. 1176-1185, Sep. 2004.
5. C. L. Yu, S. C. Huang, M. Dahlbom, and M. Bergsneider, "Alignment of transmission and emission scans of PET to correct for subject movement using a sinogram consistency criterion," in Proc. 2003 IEEE Nucl. Sci. Symp. Conf. Rec., Oct. 2003, vol. 4, pp. 2889-2892. (Pubitemid 40088834)
6. R. Liao, J. Krolik, andM. J.McKeown, "Movement correction of fMRI time-series using intrinsic statistical properties of images: An independent component analysis approach," in Proc. 2002 IEEE Int. Symp. Biomed. Imag., 2002, pp. 765-768.
7. S. Ricco,M. Chen, H. Ishikawa,G.Wollstein, and J. S. Schuman, "Correcting motion artifacts in retinal spectral domain optical coherence tomography via image registration," in Proc. Med. Imag. Computing Computer Assist. Intervent. (MICCAI), Sep. 2009, pp. 100-107.
8. J. Xu, H. Ishikawa, D. A. Tolliver, G. Wollstein, G. L. Miller, R. A. Bilonick, L. Kagemann, and J. S. Schuman, "Shape context algorithm applied to correct eye movement artifacts on three-dimensional (3-D) spectral domain optical coherence tomography (SD-OCT)," presented at the Reducing Disparities in Eye Disease and Treatment, 2009 ARVO Annu. Meeting, Ft. Lauderdale, FL, May 2009.
9. A. Ardeshir Goshtasby, 2-D and 3-D Image Registration: For Medical, Remote Sensing, and Industrial Applications. New York:Wiley, 2005.
10. [Online]. Available: http://www.heidelbergengineering.com/products/ spectralis-hra-oct/
11. [Online]. Available: http://www.meditec.zeiss.com/cirrus
12. S. Belongie, J. Malik, and J. Puzicha, "Shape matching and object recognition using shape context," IEEE Trans. Pattern Anal. Mach. Intell., vol. 24, no. 4, pp. 509-522, Apr. 2002. (Pubitemid 34448769)
13. J. Xu, D. Tolliver, H. Ishikawa, G.Wollstein, and J. S. Schuman, "3-D OCT retinal vessel segmentation based on boosting learning," World Congress Med. Phys. Biomed. Eng., vol. 25, pp. 179-182, 2009.
14. J. Xu, H. Ishikawa, G. Wollstein, and J. S. Schuman, "Retinal vessel segmentation on SLO image," in Proc. IEEE Eng. Med. Biol. Soc., Sep. 2008, pp. 2258-2261.
15. M.Kraus,M.A.Mayer,R.Bock,B. Potsaid, V.Manjunath, J. S. Duker, J. Hornegger, and J. G. Fujimoto, "Combination of multiple motion corrected OCT volume scans for noise reduction and extraction of arbitrary cross-sectional images," presented at the 2010 ARVO/ISIE Imag. Conf., Ft. Lauderdale, FL, May 2010.
16. B. Antony, M. D. Abràmoff, L. Tang,W. D. Ramdas, J. R. Vingerling, N. M. Jansonius, K. Lee, Y. H. Kwon, M. Sonka, and M. K. Garvin, "Automated 3-Dmethod for the correction of axial artifacts in spectraldomain optical coherence tomography images," Biomed. Opt. Express, vol. 2, no. 8, pp. 2403-2416, Aug. 1, 2011.
17. Z. Yan, M. B. Yeary, S. Cheng, and N. Kehtarnavaz, "An object-tracking algorithm based on multiple-model particle filtering with state partitioning," IEEE Trans. Instrum. Meas., vol. 58, no. 5, pp. 1797-1809, Apr. 2009.
18. A. Doucet and A. M. Johansen, A tutorial on particle filtering and smoothing: Fifteen years later Dept. Stat., Univ. British Columbia, Vancouver, BC, Canada, Tech. Rep.
19. J. Xu, H. Ishikawa, G. Wollstein, and J. S. Schuman, "3-D OCT eye movement correction based on particle filtering," in Proc. IEEE Eng. Med. Biol. Soc., Sep. 2010, pp. 53-56.
20. J. Xu, H. Ishikawa, G.Wollstein, R. A. Bilonick, K. R. Sung, L. Kagemann, and J. S. Schuman, "Automated assessment of optic nerve head on stereo disc photographs," Invest. Ophthalmol. Vis. Sci., vol. 49, pp. 2512-2517, 2008.