Maximum-parsimony haplotype inference based on sparse representations of genotypes

IEEE Transactions on Signal Processing

Volumn 60, Issue 4, 2012, Pages 2013-2023

  Jajamovich, Guido H ^a   Wang, Xiaodong ^a  

^a Columbia University ^*  (United States)

Author keywords

Haplotype inference; maximum parsimony principle; sparse dictionary; sparse representations

Indexed keywords

DATA SETS; EXACT SOLUTION; FREQUENCY VECTOR; GREEDY METHOD; HAPLOTYPE INFERENCE; HAPLOTYPES; HIGH PROBABILITY; INTEGER LINEAR PROGRAMS; LOCAL MINIMUM POINT; LOCAL MINIMUMS; LOW DIMENSIONALITY; MAXIMIZATION PROBLEM; MAXIMUM PARSIMONY; NP-HARD; SELECTION PROBLEMS; SPARSE REPRESENTATION; SPARSE REPRESENTATIONS; STATE-OF-THE-ART METHODS; SUBMODULAR; TSALLIS ENTROPIES;

COMPUTATIONAL COMPLEXITY; INTEGER PROGRAMMING;

ENTROPY;

EID: 84863387284     PISSN: 1053587X     EISSN: None     Source Type: Journal    
DOI: 10.1109/TSP.2011.2179542     Document Type: Article

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