A two step Bayesian approach for genomic prediction of breeding values

BMC Proceedings

Volumn 6, Issue SUPPL. 2, 2012, Pages

  Shariati, Mohammad M ^a,b   Sørensen, Peter ^a   Janss, Luc ^a  

^a AARHUS UNIVERSITY   (Denmark)

^b FERDOWSI UNIVERSITY OF MASHHAD   (Iran)

Author keywords

[No Author keywords available]

Indexed keywords

ACCURACY; ARTICLE; BAYES THEOREM; GENE FREQUENCY; GENOMIC BREEDING VALUE PREDICTION; GENOMICS; NONHUMAN; PREDICTION; PRIORITY JOURNAL; SIMULATION; SINGLE NUCLEOTIDE POLYMORPHISM; VARIANCE; WORKSHOP;

EID: 84863333742     PISSN: None     EISSN: 17536561     Source Type: Journal    
DOI: 10.1186/1753-6561-6-S2-S12     Document Type: Article

References (14)

1. Prediction of total genetic value using genome-wide dense marker maps. Meuwissen T, Hayes B, Goddard M, Genetics 2001 157 1819 1829 11290733 (Pubitemid 32298846)
2. Efficient methods to compute genomic predictions. VanRaden PM, J Dairy Sci 2008 91 4414 4423 10.3168/jds.2007-0980 18946147
3. Technical note: Derivation of equivalent computing algorithms for genomic predictions and reliabilities of animal merit. Strandén I, Garrick DJ, J Dairy Sci 2009 92 2971 2975 10.3168/jds.2008-1929 19448030
4. LASSO with cross-validation for genomic selection. Usai MG, Goddard ME, Hayes BJ, Genet Res 2009 91 427 436 10.1017/S0016672309990334
5. Extended Bayesian LASSO for multiple quantitative trait loci mapping and unobserved phenotype prediction. Mutshinda CM, Sillanpaa MJ, Genetics 2010 186 1067 1075 10.1534/genetics.110.119586 20805559
6. Semi-parametric genomic-enabled prediction of genetic values using reproducing kernel Hilbert spaces methods. de los Campos G, Gianola D, Rosa GJM, Weigel KA, Crossa J, Genet Res 2010 92 295 308 10.1017/S0016672310000285
7. Additive genetic variability and the Bayesian alphabet. Gianola D, de los Campos G, Hill WG, Manfredi E, Fernando R, Genetics 2009 183 347 363 10.1534/genetics.109.103952 19620397
8. th QTLMAS: simulated dataset. Elsen JM, Tesseydre S, Filangi O, Le Roy P, Demeure O, Proceedings of the XVth QTLMAS Workshop: 19-20 May 2011; Rennes France, Demeure O, Elsen JM, Filangi O, Le Roy P, 2012
9. Lynch M, Walsh B, Genetics and Analysis of Quantitative Traits Sinauer 1998
10. Genomic estimation of heritability under different gene action scenarios. Janss L, Shariati MM, Proceedings of the 9th Congress on Genetics applied to Livestock Production: 1-6 August 2010; Leipzig 2010 904
11. Genomic Breeding Value Prediction and QTL mapping of QTLMAS2011 data using Bayesian and GBLUP methods. Zeng J, Pszczola M, Wolc A, Strabel T, Fernando RL, Garrick DJ, Dekkers JCM, Proceedings of the XVth QTLMAS Workshop: 19-20 May 2011; Rennes France, Demeure O, Elsen JM, Filangi O, Le Roy P, 2012
12. Comparison of five methods for genomic breeding value estimation for the common dataset of the 15th QTL-MAS Workshop. Wang CL, Ma PP, Zhang Z, Ding XD, Liu JF, Fu WX, Weng ZQ, Zhang Q, Proceedings of the XVth QTLMAS Workshop: 19-20 May 2011; Rennes France, Demeure O, Elsen JM, Filangi O, Le Roy P, 2012
13. The impact of genetic relationship information on genome-assisted breeding values. Habier D, Fernando RL, Dekkers JCM, Genetics 2007 177 2389 2397 18073436 (Pubitemid 350277013)
14. Different models of genetic variation and their effect on genomic evaluation. Clark SA, Hickey JM, van der Werf JHJ, Genet Sel Evol 2011 43 18 10.1186/1297-9686-43-18 21575265