Apache Airavata: A framework for distributed applications and computational workflows

GCE'11 - Proceedings of the 2011 ACM Workshop on Gateway Computing Environments, Co-located with SC'11

Volumn , Issue , 2011, Pages 21-28

  Marru, Suresh ^a   Gunathilake, Lahiru ^a   Herath, Chathura ^a   Tangchaisin, Patanachai ^a   Pierce, Marlon ^a   Mattmann, Chris ^b   Singh, Raminder ^a   Gunarathne, Thilina ^a   Chinthaka, Eran ^a   Gardler, Ross ^c   Slominski, Aleksander ^d   Douma, Ate ^c   Perera, Srinath ^e   Weerawarana, Sanjiva ^e  

^a INDIANA UNIVERSITY   (United States)

^b CALIFORNIA INSTITUTE OF TECHNOLOGY   (United States)

^c Open Directive ^*  (Netherlands)

^d IBM RESEARCH   (United States)

^e Lanka Software Foundation   (Sri Lanka)

Author keywords

Grid applications; Science gateways; Scientific workflow

Indexed keywords

COMPUTATIONAL GRIDS; COMPUTATIONAL RESOURCES; DISTRIBUTED APPLICATIONS; DISTRIBUTED MESSAGING; GRID APPLICATIONS; INDIVIDUAL COMPONENTS; INTEGRATED SOLUTIONS; SCIENCE GATEWAY; SCIENTIFIC WORKFLOWS; SERVICE ORIENTED COMPUTING; SOFTWARE FRAMEWORKS; WORK-FLOWS; WORKFLOW COMPOSITION; WORKFLOW MANAGEMENT SYSTEMS;

COMPUTER PROGRAMMING; WORK SIMPLIFICATION;

DISTRIBUTED COMPUTER SYSTEMS;

EID: 84863262886     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1145/2110486.2110490     Document Type: Conference Paper

References (36)

1. Apache. Tika. http://tika.apache.org/.
2. M. Armbrust, A. Fox, R. Griffith, A. Joseph, R. Katz, A. Konwinski, G. Lee, D. Patterson, A. Rabkin, I. Stoica, et al. Above the clouds: A berkeley view of cloud computing. EECS Department, University of California, Berkeley, Tech. Rep. UCB/EECS-2009-28, 2009.
3. ASF. Apache software foundation. http://incubator.apache.org/airavata/.
4. D. Bernholdt, S. Bharathi, D. Brown, K. Chanchio, M. Chen, A. Chervenak, L. Cinquini, B. Drach, I. Foster, P. Fox, et al. The earth system grid: Supporting the next generation of climate modeling research. Proceedings of the IEEE, 93(3):485-495, 2005. (Pubitemid 40851204)
5. D. Borthakur. The hadoop distributed file system: Architecture and design. Hadoop Project Website, 2007.
6. K. Brewster, D. Weber, K. Thomas, K. Droegemeier, Y. Wang, M. Xue, S. Marru, D. Gannon, J. Alameda, B. Jewett, et al. Use of the lead portal for on-demand severe weather prediction. In Sixth Conference on Artificial Intelligence Applications to Environmental Science, 88th Annual Meeting of the American Meteorological Society, New Orleans, 2008.
7. M. Christie and S. Marru. The lead portal: a teragrid gateway and application service architecture: Research articles. Concurr. Comput.: Pract. Exper., April 2007.
8. R. Clark, S. Marru, M. Christie, D. Gannon, B. Illston, K. Droegemeier, and T. Baltzer. The lead-wxchallenge pilot project: enabling the community. In 24th Conference on IIPS, 2008.
9. F. Curbera, F. Leymann, T. Storey, D. Ferguson, and S. Weerawarana. Web services platform architecture: SOAP, WSDL, WS-policy, WS-addressing, WS-BPEL, WS-reliable messaging and more. Prentice Hall PTR, 2005.
10. E. Deelman, J. Blythe, Y. Gil, C. Kesselman, G. Mehta, S. Patil, M. Su, K. Vahi, and M. Livny. Pegasus: Mapping scientific workflows onto the grid. In Grid Computing, pages 131-140. Springer, 2004.
11. B. Demeler. UltraScan: a comprehensive data analysis software package for analytical ultracentrifugation experiments. Analytical Ultracentrifugation: Techniques And Methods, pages 210-229, 2005.
12. R. Dooley, K. Milfeld, C. Guiang, S. Pamidighantam, and G. Allen. From proposal to production: Lessons learned developing the computational chemistry grid cyberinfrastructure. Journal of Grid Computing, 2006.
13. Extreme. Computing lab. http://extreme.indiana.edu.
14. I. Foster, C. Kesselman, and S. Tuecke. The anatomy of the grid: Enabling scalable virtual organizations. International Journal of High Performance Computing Applications, 2001.
15. D. Gannon, B. Plale, S. Marru, G. Kandaswamy, Y. Simmhan, and S. Shirasuna. Dynamic, adaptive workflows for mesoscale meteorology. Workflows for e-Science, pages 126-142, 2007.
16. J. Ghosh, N. Singh, Y. Fan, S. Marru, K. Vanomesslaeghe, and S. Pamidighantam. Molecular Parameter Optimization Gateway (ParamChem). In Proceedings of the 2011 TeraGrid Conference. ACM, 2011.
17. C. Goble and D. De Roure. myexperiment: social networking for workflow-using e-scientists. In Proceedings of the 2nd workshop on Workflows in support of large-scale science, pages 1-2. ACM, 2007. (Pubitemid 47291445)
18. T. Gunarathne, C. Herath, E. Chinthaka, and S. Marru. Experience with adapting a ws-bpel runtime for escience workflows. In Proceedings of the 5th Grid Computing Environments Workshop, pages 7:1-7:10. ACM, 2009.
19. Y. Huang, A. Slominski, C. Herath, and D. Gannon. Ws-messenger: A web services-based messaging system for service-oriented grid computing. In Cluster Computing and the Grid, 2006. CCGRID 06. Sixth IEEE International Symposium on, volume 1, pages 8-pp. IEEE, 2006.
20. Java. Content repository. http://jcp.org/aboutJava/communityprocess/ review/jsr170/.
21. R. Jayasinghe, D. Gamage, and S. Perera. Towards improved data dissemination of publish-subscribe systems. In 2010 IEEE International Conference on Web Services, pages 520-525. IEEE, 2010.
22. G. Klimeck, M. McLennan, S. Brophy, G. Adams III, and M. Lundstrom. nanohub. org: Advancing education and research in nanotechnology. | Computing in Science & Engineering, 2008.
23. B. Lud scher, I. Altintas, C. Berkley, D. Higgins, E. Jaeger, M. Jones, E. Lee, J. Tao, and Y. Zhao. Scientific workflow management and the kepler system. Concurrency and Computation: Practice and Experience, 2006.
24. C. Mattmann, D. Crichton, N. Medvidovic, and S. Hughes. A software architecture-based framework for highly distributed and data intensive scientific applications. In Proceedings of the 28th international conference on Software engineering, pages 721-730. ACM, 2006. (Pubitemid 46600981)
25. M. Miller, W. Pfeiffer, and T. Schwartz. Creating the cipres science gateway for inference of large phylogenetic trees. In Gateway Computing Environments Workshop (GCE), 2010, pages 1-8. IEEE, 2010.
26. T. Oinn, M. Addis, J. Ferris, D. Marvin, M. Senger, M. Greenwood, T. Carver, K. Glover, M. Pocock, A. Wipat, et al. Taverna: a tool for the composition and enactment of bioinformatics workflows. Bioinformatics, 20(17):3045, 2004.
27. S. Perera, S. Marru, and C. Herath. Workflow Infrastructure for Multi-scale Science Gateways. In TeraGrid Conference, June, 2008.
28. M. Pierce, S. Marru, R. Singh, A. Kulshrestha, and K. Muthuraman. Open grid computing environments: advanced gateway support activities. In Proceedings of the 2010 TeraGrid Conference. ACM, 2010.
29. M. Pierce, S. Marru, W. Wu, G. Kandaswami, G. von Laszewski, R. Dooley, M. Dahan, N. Wilkins-Diehr, and M. Thomas. Open grid computing environments. In Proceedings of the Fourth Annual TeraGrid Conference. Citeseer, 2009.
30. J. Saltz, S. Oster, S. Hastings, S. Langella, T. Kurc, W. Sanchez, M. Kher, A. Manisundaram, K. Shanbhag, and P. Covitz. cagrid: design and implementation of the core architecture of the cancer biomedical informatics grid. Bioinformatics, 2006.
31. A. Slominski. Adapting bpel to scientific workflows. Workflows for e-Science, pages 208-226, 2007.
32. P. Srinath, H. Chathura, E. Jaliya, C. Eran, R. Ajith, J. Deepal, W. Sanjiva, and D. Glen. Axis2, middleware for next generation web services. In Web Services, 2006. ICWS'06. International Conference on, pages 833-840, 2006.
33. I. Taylor, M. Shields, I. Wang, and A. Harrison. The triana workflow environment: Architecture and applications. Workflows for e-Science, pages 320-339, 2007.
34. S. Vinoski. Chain of responsibility. Internet Computing, IEEE, 6(6):80-83, 2002.
35. N. Wilkins-Diehr, D. Gannon, G. Klimeck, S. Oster, and S. Pamidighantam. Teragrid science gateways and their impact on science. Computer, 41(11):32-41, 2008.
36. Y. Yang, J. Choi, C. Herath, S. Marru, and S. Kim. Biovlab: Bioinformatics data analysis using cloud computing and graphical workflow composers. Cloud Computing and Software Services, page 309, 2010.