Time-resolved spectroscopy of ultrafast photoisomerization of octopus rhodopsin under photoexcitation

Journal of Physical Chemistry B

Volumn 116, Issue 6, 2012, Pages 1920-1926

  Yabushita, Atsushi ^a   Kobayashi, Takayoshi ^a,b,c,d   Tsuda, Motoyuki ^e  

^a NATIONAL CHIAO TUNG UNIVERSITY   (Taiwan)

^b JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

^c UNIVERSITY OF ELECTRO COMMUNICATIONS   (Japan)

^d OSAKA UNIVERSITY   (Japan)

^e TOKUSHIMA BUNRI UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

CHROMOPHORES; HYDROGEN; LASER SPECTROSCOPY; SHELLFISH; ULTRASHORT PULSES;

C-C DOUBLE BONDS; CIS-TRANS PHOTOISOMERIZATION; CONFIGURATION SPACE; CONICAL INTERSECTION; IN-PLANE; OUT-OF-PLANE; PULSE LASER; RAPID RELAXATION; SPECTROGRAMS; STRETCHING MODES; STRUCTURAL VARIATIONS; THERMALIZATION; TIME CONSTANTS; TIME-RESOLVED SPECTROSCOPY; TORSIONAL MOTION; ULTRA-FAST;

PHOTOEXCITATION;

EID: 84863137290     PISSN: 15206106     EISSN: 15205207     Source Type: Journal    
DOI: 10.1021/jp209356s     Document Type: Article

References (44)

1. Yoshizawa, T.; Kito, Y. Nature 1958, 182, 1604-1605
2. Yoshizawa, T.; Wald, G. Nature 1963, 197, 1279-1286
3. Buchert, J.; Stefancic, V.; Doukas, A. G.; Alfano, R. R.; Callender, R. H.; Pande, J.; Akita, H.; Balogh-Nair, V.; Nakanishi, K. Biophys. J. 1983, 43, 279-283
4. Horiuchi, S.; Tokunaga, F.; Yoshizawa, T. Biochim. Biophys. Acta 1980, 591, 445-457
5. Eyring, G.; Curry, B.; Mathies, R.; Fransen, R.; Palings, I; Lugtenburg J. Biochem. 1980, 19, 2410-2418
6. Kandori, H.; Shichida, Y.; Yoshizawa, T. Biochemistry (Moscow) 2001, 66, 1197-1209
7. Kukura, P.; McCamant, D. W.; Yoon, S.; Wandschneider, D. B.; Mathies, R. A. Science 2005, 310, 1006-1009
8. Ohtani, H.; Kobayashi, T.; Tsuda, M.; Ebrey, T. G. Biophys. J. 1988, 53, 17-24
9. Shichida, Y.; Matsuoka, S.; Yoshizawa, T. Photobiochem. Photobiophys. 1984, 7, 221-228
10. Sperling, W. In Biochemistry and Physiology of Visual Pigments; Langer, H, Ed.; Springer-Verlag: Heidelberg, 1973; pp 19-28.
11. Fukada, Y.; Shichida, Y.; Yoshizawa, T.; Ito, M.; Kodama, A.; Tsukida, K. Biochemistry 1984, 23, 5826-5832
12. Mao, B.; Tsuda, M.; Ebrey, T. G.; Akita, H.; Balogh-Nair, V.; Nakanishi, K. Biophys. J. 1981, 35, 543-546
13. Becker, R. S.; Freedman, K. J. Am. Chem. Soc. 1985, 107, 1477-1485
14. Koyama, Y.; Kubo, K.; Komori, M.; Yasuda, H.; Mukai, Y. Photochem. Photobiol. 1991, 54, 433-443
15. Dartnall, H. J. A. Vision Res. 1967, 8, 339-358
16. Kobayashi, T.; Kim, M.; Taiji, M.; Iwasa, T.; Nakagawa, M.; Tsuda, M. J. Phys. Chem. B 1998, 102, 272-280
17. Zhu, L.; Kim, J.; Mathies, R. A. J. Raman Spectrosc. 1999, 30, 777-783
18. Kandori, H.; Sasabe, H.; Nakanishi, K.; Yoshizawa, T.; Mizukami, T.; Shichida, Y. J. Am. Chem. Soc. 1996, 118, 1002-1005
19. Chosrowjan, H.; Mataga, N.; Shibata, Y.; Tachibanaki, S.; Kandori, H.; Shichida, Y.; Okada, T.; Kouyama, T. J. Am. Chem. Soc. 1998, 120, 9706-9707
20. Kandori, H.; Furutani, Y.; Nishimura, S.; Shichida, Y.; Chosrowjan, H.; Shibata, Y.; Mataga, N. Chem. Phys. Lett. 2001, 334, 271-276
21. Schoenlein, R. W.; Peteanu, L. A.; Mathies, R. A.; Shank, C. V. Science 1991, 254, 412-415
22. Kim, J. E.; Mathies, R. A. J. Phys. Chem. A 2002, 106, 8508-8515
23. Shim, S.; Dasgupta, J.; Mathies, R. A. J. Am. Chem. Soc. 2009, 131, 7592-7597
24. Yabushita, A.; Kobayashi, T. Biophys. J. 2009, 96, 1447-1461
25. Pollard, W. T.; Brito Crus, C. H.; Shank, C. V.; Mathies, R. A. J. Chem. Phys. 1989, 90, 199-208
26. Du, M.; Flemming, G. R. Biophys. Chem. 1993, 48, 101-111
27. Kobayashi, T.; Saito, T.; Ohtani, H. Nature 2001, 414, 531-534
28. Baltuska, A.; Kobayashi, T. Appl. Phys. B: Laser Opt. 2002, 75, 427-443
29. Kobayashi, T.; Shirakawa, A.; Matsuzawa, H.; Nakanishi, H. Chem. Phys. Lett. 2000, 321, 385-397
30. Shirakawa, A.; Sakane, I.; Takasaka, M.; Kobayashi, T. Appl. Phys. Lett. 1999, 74, 2268-2270
31. Hozwarth, A. R. Adv. Photosynth. Respir. 2004, 3, 75-92
32. Peteanu, L. A.; Schoenlein, R. W.; Qang, Q.; Mathies, R. A.; Shank, C. V. Proc. Natl. Acad. Sci. U.S.A. 1995, 9, 11762-11766
33. Meier, T.; Mukamel, S. Phys. Rev. Lett. 1996, 77, 3471-3474
34. Rutz, S.; Schreiber, E. Eur. Phys. J. D 1998, 4, 151-158
35. Smith, S. O.; Braiman, M. S.; Myers, A. B.; Pardoen, J. A.; Courtin, J. M. L.; Winkel, C.; Lugtenburg, J.; Mathies, R. A. J. Am. Chem. Soc. 1987, 109, 3108-3125
36. Rothschild, K. J.; Marrero, H. Proc. Natl. Acad. Sci. U.S.A. 1982, 79, 4045-4049
37. Kahan, A.; Nahmias, O.; Friedman, N.; Sheves, M.; Ruhman, S. J. Am. Chem. Soc. 2007, 129, 537-546
38. Pollard, W. T.; Lee, S.-Y.; Mathies, R. A. J. Chem. Phys. 1990, 92, 4012-4029
39. Jean, J. M.; Fleming, G. R. J. Chem. Phys. 1995, 103, 2092-2101
40. Wang, Q.; Schoenlein, R. W.; Peteanu, L. A.; Mathies, R. A.; Shank, C. V. Science 1994, 266, 422-424
41. Gordy, W. J. Chem. Phys. 1946, 14, 305-320
42. Baughman, R. H.; Witt, J. D.; Yee, K. C. J. Chem. Phys. 1974, 60, 4755-4759
43. Dewar, M. J. S. Hyperconjugation; Modern Concepts in Chemistry; Ronald Press: New York, 1962; Chapters 3 and 4, pp 48-70.
44. Kochendoerfer, G. G.; Mathies, R. A. J. Phys. Chem. 1996, 100, 14526-14532