EST dataset of pituitary and identification of somatolactin and novel genes in Chinese sturgeon, Acipenser sinensis

Molecular Biology Reports

Volumn 39, Issue 4, 2012, Pages 4647-4653

  Cao, Hong ^a   Leng, Xiaoqian ^b   Li, Chuangju ^c   Wei, Qiwei ^c   Gui, Jianfang ^b   Cheng, Hanhua ^a   Zhou, Rongjia ^a  

^a WUHAN UNIVERSITY   (China)

^b INSTITUTE OF HYDROBIOLOGY   (China)

^c SOUTH CHINA SEA FISHERIES RESEARCH INSTITUTE   (China)

Author keywords

Acipenser sinensis; Endocrinology; ESTs; Pituitary; Somatolactin

Indexed keywords

COMPLEMENTARY DNA; HYPOPHYSIS HORMONE; MESSENGER RNA; SOMATOLACTIN; UNCLASSIFIED DRUG; FISH PROTEIN; GLYCOPROTEIN; SOMATOLACTIN PROTEIN, FISH;

3' UNTRANSLATED REGION; 5' UNTRANSLATED REGION; AMINO ACID SEQUENCE; AMINO TERMINAL SEQUENCE; ARTICLE; DNA SEQUENCE; EXPRESSED SEQUENCE TAG; FEMALE; GENE EXPRESSION REGULATION; GENETIC IDENTIFICATION; MALE; MOLECULAR EVOLUTION; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PHYLOGENY; PROTEIN EXPRESSION; PROTEIN FUNCTION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS; STURGEON; UNINDEXED SEQUENCE; ANIMAL; ANTIBODY SPECIFICITY; CHEMISTRY; CHINA; FISH; GENE EXPRESSION PROFILING; GENETIC DATABASE; GENETICS; HYPOPHYSIS; METABOLISM; MOLECULAR GENETICS;

ACIPENSER SINENSIS; ACIPENSER TRANSMONTANUS;

AMINO ACID SEQUENCE; ANIMALS; CHINA; DATABASES, GENETIC; DNA, COMPLEMENTARY; EXPRESSED SEQUENCE TAGS; FEMALE; FISH PROTEINS; FISHES; GENE EXPRESSION PROFILING; GLYCOPROTEINS; MOLECULAR SEQUENCE DATA; ORGAN SPECIFICITY; PHYLOGENY; PITUITARY GLAND; PITUITARY HORMONES; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, MESSENGER; SEQUENCE ALIGNMENT;

EID: 84863086679     PISSN: 03014851     EISSN: 15734978     Source Type: Journal    
DOI: 10.1007/s11033-011-1256-6     Document Type: Article

References (43)

1. Wei QW, Ke FE, Zhang J, Zhuang P, Luo J, Zhou RQ, Yang WH (1997) Biology, fisheries, and conservation of sturgeons and paddlefish, in China. Environ Biol Fish 48:241-255
2. Billard R, Lecointre G (2001) Biology and conservation of sturgeon and paddlefish. Rev Fish Biol fisher 10:355-392
3. Cao H, Zhou L, Zhang YZ, Wei QW, Chen XH, Gui JF (2009) Molecular characterization of Chinese sturgeon gonadotropins and cellular distribution in pituitaries of mature and immature individuals. Mol Cell Endocrinol 303:34-42
4. Li CJ, Wei QW, Zhou L, Cao H, Zhang Y, Gui JF (2009) Molecular and expression characterization of two somatostatin genes in the Chinese sturgeon, Acipenser sinensis. Comp Biochem Physiol Mol Integr Physiol 154:127-134
5. Ono M, Takayama Y, Rand-Weaver M, Sakata S, Yasunaga T, Noso T, Kawauchi H (1990) cDNA cloning of somatolactin, a pituitary protein related to growth hormone and prolactin. Proc Natl Acad Sci USA 87:4330-4334
6. Takayama Y, Ono M, Rand-Weaver M, Kawauchi H (1991) Greater conservation of somatolactin, a presumed pituitary hormone of the growth hormone/prolactin family, than of growth hormone in teleost fish. Gen Comparat Endocrinol 83(3):366-374
7. Iraqi F, Gong Z, Hew CL, Crim L (1993) Isolation and characterization of somatolactin genes from two cold water marine teleosts, lumpfish (Cyclopterus lumpus) and halibut (Hippoglossus hippoglossus). Mol Marine Biol Biotech 2:96-103
8. Astola A, Pendon C, Ortiz M, Valdivia MM (1996) Cloning and expression of somatolactin, a pituitary hormone related to growth hormone and prolactin from gilthead seabream, Sparus aurata. Gen Comparat Endocrinol 104:330-336
9. May D, Todd CM, Rand-Weaver M (1997) cDNA cloning of eel (Anguilla anguilla) somatolactin. Gene 188:63-67
10. Cheng KW, Chan YH, Chen YD, Yu KL, Chan KM (1997) Sequence of a cDNA clone encoding a novel somatolactin in goldfish, Carassius auratus. Biochem Biophys Res Commun 232:282-287
11. Amemiya Y, Sogabe Y, Nozaki M, Takahashi A, Kawauchi H (1999) Somatolactin in the white sturgeon and African lungfish and its evolutionary significance. Gen Comparat Endocrinol 114:181-190
12. Company R, Calduch-Giner JA, Mingarro M, Perez-Sanchez J (2000) CDNA cloning and sequence of European sea bass (Dicentrarchus labrax) somatolactin. Comp Biochem Physiol Biochem Mol Biol 127:183-192
13. Zhu Y, Stiller JW, Shaner MP, Baldini A, Scemama JL, Capehart AA (2004) Cloning of somatolactin alpha and beta cDNAs in zebrafish and phylogenetic analysis of two distinct somatolactin subtypes in fish. J Endocrinol 182:509-518
14. Benedet S, Bjornsson BT, Taranger GL, Andersson E (2008) Cloning of somatolactin alpha, beta forms and the somatolactin receptor in Atlantic salmon: seasonal expression profile in pituitary and ovary of maturing female broodstock. Reprod Biol Endocrinol 6:42
15. Uchida K, Moriyama S, Breves JP, Fox BK, Pierce AL, Borski RJ, Hirano T, Grau EG (2009) cDNA cloning and isolation of somatolactin in Mozambique tilapia and effects of seawater acclimation, confinement stress, and fasting on its pituitary expression. Gen Comparat Endocrinol 161:162-170
16. Tian J, Chan KM (2010) Activation of the black seabream (Acanthopagrus schlegeli) somatolactin-alpha gene promoter by Pit-1c in the Hepa-T1 cell-line. Gen Comparat Endocrinol 166:186-199
17. Xie J, Wen JJ, Chen B, Gui JF (2001) Differential gene expression in fully-grown oocytes between gynogenetic and gonochoristic crucian carps. Gene 271:109-116
18. Zhou L, Yao B, Xia W, Li CJ, Wang Y, Shi YH, Gui JF (2006) EST-based identification of genes expressed in the hypothalamus of male orange-spotted grouper (Epinephelus coioides). Aquaculture 256:129-139
19. Xia W, Zhou L, Yao B, Li CJ, Gui JF (2007) Differential and spermatogenic cell-specific expression of DMRT1 during sex reversal in protogynous hermaphroditic groupers. Mol Cell Endocrinol 263:156-172
20. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403-410
21. Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT, Harris MA, Hill DP, Issel-Tarver L, Kasarskis A, Lewis S, Matese JC, Richardson JE, Ringwald M, Rubin GM, Sherlock G (2000) Gene ontology: tool for the unification of biology. The gene ontology consortium. Nat Genet 25:25-29
22. Iseli C, Jongeneel CV, Bucher P (1999) ESTScan: a program for detecting, evaluating, and reconstructing potential coding regions in EST sequences. In: Proceedings, international conference intelligent systems for molecular biology, pp 138-148
23. Gong Z, Yan T, Liao J, Lee SE, He J, Hew CL (1997) Rapid identification and isolation of zebrafish cDNA clones. Gene 201:87-98
24. Okubo K, Matsubara K (1997) Complementary DNA sequence (EST) collections and the expression information of the human genome. FEBS Lett 403:225-229
25. Douglas SE, Gallant JW, Bullerwell CE, Wolff C, Munholland J et al (1999) Winter flounder expressed sequence tags: establishment of an EST database and identification of novel fish genes. Marine biotech (New York) 1:458-0464
26. Ju Z, Karsi A, Kocabas A, Patterson A, Li P, Cao D, Dunham R, Liu Z (2000) Transcriptome analysis of channel catfish (Ictalurus punctatus): genes and expression profile from the brain. Gene 261:373-382
27. Quackenbush J, Liang F, Holt I, Pertea G, Upton J (2000) The TIGR gene indices: reconstruction and representation of expressed gene sequences. Nucl Acid Res 28:141-145
28. Liu Z, Karsi A, Dunham RA (1999) Development of polymorphic EST markers suitable for genetic linkage mapping of catfish. Marine biotechnol (New York) 1:437-0447
29. Liu Z, Li P, Kocabas A, Karsi A, Ju Z (2001) Microsatellitecontaining genes from the channel catfish brain: evidence of trinucleotide repeat expansion in the coding region of nucleotide excision repair gene RAD23B. Biochem Biophys Res Commun 289:317-324
30. He C, Chen L, Simmons M, Li P, Kim S et al (2003) Putative SNP discovery in interspecific hybrids of catfish by comparative EST analysis. Anim Genet 34:445-448
31. Poompuang S, Hallerman EM (1997) Toward detection of quantitative trait loci and marker-assisted selection in fish. Rev Fish Sci 5:253-277
32. Liu ZJ, Cordes JF (2004) DNA marker technologies and their applications in aquaculture genetics. Aquaculture 238:1-37
33. Liu JX, Gui JF (2005) Expression pattern and developmental behaviour of cellular nucleic acid-binding protein (CNBP) during folliculogenesis and oogenesis in fish. Gene 356:181-192
34. Planas JV, Swanson P, Rand-Weaver M, Dickhoff WW (1992) Somatolactin stimulates in vitro gonadal steroidogenesis in coho salmon, Oncorhynchus kisutch. Gen Comparat Endocrinol 87:1-5
35. Rand-Weaver M, Swanson P, Kawauchi H, Dickhoff WW (1992) Somatolactin, a novel pituitary protein: purification and plasma levels during reproductive maturation of coho salmon. J Endocrinol 133:393-403
36. Rand-Weaver M, Pottinger TG, Sumpter JS (1993) Plasma somatolactin concentrations in salmonid fish are elevated by stress. J Endocrinol 138:509-515
37. Kaneko T, Hirano T (1993) Role of prolactin and somatolactin in calcium regulation in fish. J Exp Biol 184:31-45
38. Kaneko T, Kakizawa S, Yada T (1993) Pituitary of "cobalt" variant of the rainbow trout removed from hypothalamus lacks most of pars intermedia and neurohypophysial tissue. Gen Comparat Endocrinol 92:31-40
39. Rand-Weaver M, Swanson P (1993) Plasma somatolactin levels in coho salmon (Oncorhynchus kisutch) during smoltification and sexual maturation. Fish Physiol Biochem 11:175-182
40. Kakizawa S, Kaneko T, Hirano T (1996) Elevation of plasma somatolactin concentrations during acidosis in rainbow trout (Oncorhynchus mykiss). J ExpBiol 199:1043-1051
41. Fukamachi S, Sugimoto M, Mitani H, Shima A (2004) Somatolactin selectively regulates proliferation and morphogenesis of neural-crest derived pigment cells in medaka. Proc Natl Acad Sci USA 101:10661-10666
42. Fukamachi S, Yada T, Mitani H (2005) Medaka receptors for somatolactin and growth hormone: phylogenetic paradox among fish growth hormone receptors. Genetics 171:1875-1883
43. Fukamachi S, Yada T, Meyer A, Kinoshita M (2009) Effects of constitutive expression of somatolactin alpha on skin pigmentation in medaka. Gene 442:81-87