메뉴 건너뛰기




Volumn 1, Issue 5, 1999, Pages 437-447

Development of polymorphic EST markers suitable for genetic linkage mapping of catfish

Author keywords

Catfish; Expressed sequence tags; Gene mapping; Marker; Polymorphism

Indexed keywords

CODON; COMPLEMENTARY DNA; DNA POLYMORPHISM; EXPRESSED SEQUENCE TAG; GENE EXPRESSION; GENE MAPPING; GENE SEQUENCING; GENETIC LINKAGE; GENETIC MARKER; GENETIC SELECTION; GENOME ANALYSIS; MICROSATELLITE DNA; POLYMERASE CHAIN REACTION; PRIMER DNA; RIBOSOME;

EID: 0033191506     PISSN: 14362228     EISSN: None     Source Type: Journal    
DOI: 10.1007/PL00011800     Document Type: Article
Times cited : (50)

References (42)
  • 2
    • 0030597364 scopus 로고    scopus 로고
    • Sequences of two expressed sequence tags (EST) from rice encoding different cap-binding proteins
    • Aliyeva, E., Metz, A.M., and Browning, K.S. (1996). Sequences of two expressed sequence tags (EST) from rice encoding different cap-binding proteins. Gene 180:221-223.
    • (1996) Gene , vol.180 , pp. 221-223
    • Aliyeva, E.1    Metz, A.M.2    Browning, K.S.3
  • 3
    • 0030605257 scopus 로고    scopus 로고
    • Identification of novel genes from Entamoeba histolytica by expressed sequence tag analysis
    • Azam, A., Paul, J., Sehgal, D., Prasad, J., Bhattacharya, S., and Bhattacharya, A. (1996). Identification of novel genes from Entamoeba histolytica by expressed sequence tag analysis. Gene 181: 113-116.
    • (1996) Gene , vol.181 , pp. 113-116
    • Azam, A.1    Paul, J.2    Sehgal, D.3    Prasad, J.4    Bhattacharya, S.5    Bhattacharya, A.6
  • 4
    • 0029355897 scopus 로고
    • Establishing a human transcript map
    • Boguski, M.S., and Schuler, G.D. (1995). Establishing a human transcript map. Nature Genet 10:369-371.
    • (1995) Nature Genet , vol.10 , pp. 369-371
    • Boguski, M.S.1    Schuler, G.D.2
  • 6
    • 0025131820 scopus 로고
    • Radiation hybrid mapping: A somatic cell genetic method for constructing high-resolution maps of mammalian chromosomes
    • Cox, D.R., Burmeister, M., Price, E.R., Kim, S., and Myers, R.M. (1990). Radiation hybrid mapping: a somatic cell genetic method for constructing high-resolution maps of mammalian chromosomes. Science 250:245-250.
    • (1990) Science , vol.250 , pp. 245-250
    • Cox, D.R.1    Burmeister, M.2    Price, E.R.3    Kim, S.4    Myers, R.M.5
  • 7
    • 0029807353 scopus 로고    scopus 로고
    • Mutations in sheep microsatellites
    • Crawford, A.M., and Cuthbertson, R.P. (1996). Mutations in sheep microsatellites. Genome Res 6:876-879.
    • (1996) Genome Res , vol.6 , pp. 876-879
    • Crawford, A.M.1    Cuthbertson, R.P.2
  • 8
    • 0026444754 scopus 로고
    • Estimation of microsatellite mutation rates in recombinant strains of mouse
    • Dallas, J.F. (1992). Estimation of microsatellite mutation rates in recombinant strains of mouse. Mamm Genome 3:452-456.
    • (1992) Mamm Genome , vol.3 , pp. 452-456
    • Dallas, J.F.1
  • 9
    • 0008973999 scopus 로고    scopus 로고
    • Contribution of genetically improved aquatic organisms to global food security
    • Government of Japan and FAO, Rome, Italy
    • Dunham, R.A. (1996). Contribution of genetically improved aquatic organisms to global food security. Presented at the International Conference on Sustainable Contribution of Fisheries to Food Security, Government of Japan and FAO, Rome, Italy.
    • (1996) International Conference on Sustainable Contribution of Fisheries to Food Security
    • Dunham, R.A.1
  • 10
    • 0028931899 scopus 로고
    • Identification of new Schistosoma mansoni genes by the EST strategy using a directional cDNA library
    • Franco, G.R., Adams, M.D., Bento, S.M., Simpson, A.J.G., Venter, J.C., and Pena, S.D.J. (1995). Identification of new Schistosoma mansoni genes by the EST strategy using a directional cDNA library. Gene 152:141-147.
    • (1995) Gene , vol.152 , pp. 141-147
    • Franco, G.R.1    Adams, M.D.2    Bento, S.M.3    Simpson, A.J.G.4    Venter, J.C.5    Pena, S.D.J.6
  • 11
    • 0028522543 scopus 로고
    • Bulk isolation and identification of fish genes by cDNA clone tagging
    • Gong, Z., Hu, Z., Gong, Z.Q., Kitching, R., and Hew, C.L. (1994). Bulk isolation and identification of fish genes by cDNA clone tagging. Mol Mar Biol Biotechnol 3:243-251.
    • (1994) Mol Mar Biol Biotechnol , vol.3 , pp. 243-251
    • Gong, Z.1    Hu, Z.2    Gong, Z.Q.3    Kitching, R.4    Hew, C.L.5
  • 12
    • 0020491327 scopus 로고
    • Codon usage in bacteria: Correlation with gene expressivity
    • Gouy, M., and Gautier, C. (1982). Codon usage in bacteria: correlation with gene expressivity. Nucleic Acids Res 10:7055-7074.
    • (1982) Nucleic Acids Res , vol.10 , pp. 7055-7074
    • Gouy, M.1    Gautier, C.2
  • 13
    • 0029036418 scopus 로고
    • Characterization of a tyrosine kinase-peptidase A synteny in linkage group XIII of Xiphophorus fishes (Teleostei: Poeciliidae): Implications for vertebrate chromosome evolution
    • Harless, J., Obermoeller, R.D., Walter, R.B., Svensson, R., Nairn, R.S., Vielkind, J.R., Kallman, K.D., and Morizot, D.C. (1995). Characterization of a tyrosine kinase-peptidase A synteny in linkage group XIII of Xiphophorus fishes (Teleostei: Poeciliidae): implications for vertebrate chromosome evolution. J Hered 86:235-240.
    • (1995) J Hered , vol.86 , pp. 235-240
    • Harless, J.1    Obermoeller, R.D.2    Walter, R.B.3    Svensson, R.4    Nairn, R.S.5    Vielkind, J.R.6    Kallman, K.D.7    Morizot, D.C.8
  • 14
    • 0031449827 scopus 로고    scopus 로고
    • Expressed sequence tags of medaka (Oryzias latipes) liver mRNA
    • Hirono, I., and Aoki, T. (1997). Expressed sequence tags of medaka (Oryzias latipes) liver mRNA. Mol Mar Biol Biotechnol 6:345-350.
    • (1997) Mol Mar Biol Biotechnol , vol.6 , pp. 345-350
    • Hirono, I.1    Aoki, T.2
  • 16
    • 0021958933 scopus 로고
    • Codon usage and tRNA content in unicellular and multicellular organisms
    • Ikemura, T. (1985). Codon usage and tRNA content in unicellular and multicellular organisms. Mol Biol Evol 2:13-34.
    • (1985) Mol Biol Evol , vol.2 , pp. 13-34
    • Ikemura, T.1
  • 17
    • 0031449269 scopus 로고    scopus 로고
    • A survey of expressed sequence tags in Japanese flounder (Paralichthys olivaceus) liver and spleen
    • Inoue, S., Nam, B., Hirono, I., and Aoki, T. (1997). A survey of expressed sequence tags in Japanese flounder (Paralichthys olivaceus) liver and spleen. Mol Mar Biol Biotechnol 6:376-380.
    • (1997) Mol Mar Biol Biotechnol , vol.6 , pp. 376-380
    • Inoue, S.1    Nam, B.2    Hirono, I.3    Aoki, T.4
  • 18
    • 0030569016 scopus 로고    scopus 로고
    • What drives codon choices in human genes?
    • Karlin, S., and Mrazek, J. (1996). What drives codon choices in human genes? J Mol Biol 262:459-472.
    • (1996) J Mol Biol , vol.262 , pp. 459-472
    • Karlin, S.1    Mrazek, J.2
  • 19
    • 0031733651 scopus 로고    scopus 로고
    • Transcriptional activities in the pituitaries of channel catfish before and after induced ovulation by injection of carp pituitary extract as revealed by expressed sequence tag analysis
    • Karsi, A., Li, P., Dunham, R.A., and Liu, Z.J. (1998). Transcriptional activities in the pituitaries of channel catfish before and after induced ovulation by injection of carp pituitary extract as revealed by expressed sequence tag analysis. J Mol Endocrinol. 21:121-129.
    • (1998) J Mol Endocrinol. , vol.21 , pp. 121-129
    • Karsi, A.1    Li, P.2    Dunham, R.A.3    Liu, Z.J.4
  • 20
    • 0030823320 scopus 로고    scopus 로고
    • Codon optimization for high-level expression of human erythropoietin (EPO) in mammalian cells
    • Kim, C.H., Oh, Y., and Lee, T.H. (1997). Codon optimization for high-level expression of human erythropoietin (EPO) in mammalian cells. Gene 199:293-301.
    • (1997) Gene , vol.199 , pp. 293-301
    • Kim, C.H.1    Oh, Y.2    Lee, T.H.3
  • 21
    • 0023649836 scopus 로고
    • High frequency of short frameshifts in poly CA/GT tandem repeats borne by bacteriophage M13 in Escherichia coli K-12
    • Levinson, G., and Gutman, G.A. (1987). High frequency of short frameshifts in poly CA/GT tandem repeats borne by bacteriophage M13 in Escherichia coli K-12. Nucleic Acids Res 15:5323-5338.
    • (1987) Nucleic Acids Res , vol.15 , pp. 5323-5338
    • Levinson, G.1    Gutman, G.A.2
  • 22
    • 0002476094 scopus 로고    scopus 로고
    • Considerations for genetic linkage and QTL mapping of ictalurid catfish
    • Liu, Z.J., and Dunham, R.A. (1998). Considerations for genetic linkage and QTL mapping of ictalurid catfish. Alabama Agr Exp Stat Cir Bull 321:1-19.
    • (1998) Alabama Agr Exp Stat Cir Bull , vol.321 , pp. 1-19
    • Liu, Z.J.1    Dunham, R.A.2
  • 23
    • 0030770107 scopus 로고    scopus 로고
    • Gonadotropin α subunit glycoprotein from channel catfish (Ictalurus punctatus) and its expression during hormone-induced ovulation
    • Liu, Z.J., Li, P., Argue, B., and Dunham, R.A. (1997). Gonadotropin α subunit glycoprotein from channel catfish (Ictalurus punctatus) and its expression during hormone-induced ovulation. Mol Mar Biol Biotechnol 6:221-231.
    • (1997) Mol Mar Biol Biotechnol , vol.6 , pp. 221-231
    • Liu, Z.J.1    Li, P.2    Argue, B.3    Dunham, R.A.4
  • 26
    • 0009054504 scopus 로고    scopus 로고
    • Evolutionary conservation of microsatellite loci between channel catfish (Ictalurus punctatus) and blue catfish (I. furcatus)
    • Liu, Z.J., Tan G., Kucuktas, H., Karsi, A., Li, P., Zheng, X., Kim, S., and Dunham, R.A. (1998c). Evolutionary conservation of microsatellite loci between channel catfish (Ictalurus punctatus) and blue catfish (I. furcatus). J Hered 90:307-312.
    • (1998) J Hered , vol.90 , pp. 307-312
    • Liu, Z.J.1    Tan, G.2    Kucuktas, H.3    Karsi, A.4    Li, P.5    Zheng, X.6    Kim, S.7    Dunham, R.A.8
  • 27
    • 0026166992 scopus 로고
    • Molecular genome mapping: Lessons and prospects
    • O'Brien, S.J. (1991). Molecular genome mapping: lessons and prospects. Curr Opin Genet Dev 1:105-111.
    • (1991) Curr Opin Genet Dev , vol.1 , pp. 105-111
    • O'Brien, S.J.1
  • 28
    • 0028272132 scopus 로고
    • Divergence in codon usage of Lactobacillus species
    • Pouwels, P.H., and Leunissen, J.A.M. (1994). Divergence in codon usage of Lactobacillus species. Nucleic Acids Res 22:929-936.
    • (1994) Nucleic Acids Res , vol.22 , pp. 929-936
    • Pouwels, P.H.1    Leunissen, J.A.M.2
  • 29
    • 0032054285 scopus 로고    scopus 로고
    • Stch maps to mouse chromosome 16, extending the conserved synteny with human chromosome 21
    • Reeves, R.H., Rue, E., Yu, J., and Kao, F.T. (1998). Stch maps to mouse chromosome 16, extending the conserved synteny with human chromosome 21. Genomics 49:156-157.
    • (1998) Genomics , vol.49 , pp. 156-157
    • Reeves, R.H.1    Rue, E.2    Yu, J.3    Kao, F.T.4
  • 32
    • 0025988205 scopus 로고
    • Synonymous codon usage in Saccharomyces cerevisiae
    • Sharp, P.M., and Cowe, E. (1991). Synonymous codon usage in Saccharomyces cerevisiae. Yeast 7:657-678.
    • (1991) Yeast , vol.7 , pp. 657-678
    • Sharp, P.M.1    Cowe, E.2
  • 33
    • 0027715731 scopus 로고
    • Codon usage: Mutational bias, translational selection, or both?
    • Sharp, P.M., Stenico, M., Peden, J.F., and Lloyd, A.T. (1993). Codon usage: mutational bias, translational selection, or both? Biochem Soc Trans 21:835-841.
    • (1993) Biochem Soc Trans , vol.21 , pp. 835-841
    • Sharp, P.M.1    Stenico, M.2    Peden, J.F.3    Lloyd, A.T.4
  • 34
    • 0028359705 scopus 로고
    • Codon usage in Caenorhabditis elegans: Delineation of translational selection and mutational biases
    • Stenico, M., Lloyd, A.T., and Sharp, P.M. (1994). Codon usage in Caenorhabditis elegans: delineation of translational selection and mutational biases. Nucleic Acids Res 22:2437-2446.
    • (1994) Nucleic Acids Res , vol.22 , pp. 2437-2446
    • Stenico, M.1    Lloyd, A.T.2    Sharp, P.M.3
  • 36
    • 0022533981 scopus 로고
    • Cryptic simplicity in DNA is a major source of genetic variation
    • Tautz, D., Trick, M., and Dover, G.A. (1986). Cryptic simplicity in DNA is a major source of genetic variation. Nature 322:652-656.
    • (1986) Nature , vol.322 , pp. 652-656
    • Tautz, D.1    Trick, M.2    Dover, G.A.3
  • 37
    • 0029830470 scopus 로고    scopus 로고
    • Lessons learned, promises kept: A biologist's eye view of the genome project
    • Tilghman, S.M. (1996). Lessons learned, promises kept: a biologist's eye view of the Genome Project. Genome Res 6:773-780.
    • (1996) Genome Res , vol.6 , pp. 773-780
    • Tilghman, S.M.1
  • 38
    • 0030814950 scopus 로고    scopus 로고
    • Cloning and characterization of microsatellite loci in channel catfish, Ictalurus punctatus
    • Waldbieser, G.C., and Bosworth, B.G. (1997). Cloning and characterization of microsatellite loci in channel catfish, Ictalurus punctatus. Anim Genet 28:295-298.
    • (1997) Anim Genet , vol.28 , pp. 295-298
    • Waldbieser, G.C.1    Bosworth, B.G.2
  • 41
    • 0027161022 scopus 로고
    • Mutation of human short tandem repeats
    • Weber, J.L., and Wong, C. (1993). Mutation of human short tandem repeats. Hum Mol Genet 2:1123-1128.
    • (1993) Hum Mol Genet , vol.2 , pp. 1123-1128
    • Weber, J.L.1    Wong, C.2
  • 42
    • 0030753285 scopus 로고    scopus 로고
    • A comparison of expressed sequence tags (ESTs) to human genomic sequences
    • Wolfsberg, T.G., and Landsman, D. (1997). A comparison of expressed sequence tags (ESTs) to human genomic sequences. Nucleic Acids Res 25:1626-1632.
    • (1997) Nucleic Acids Res , vol.25 , pp. 1626-1632
    • Wolfsberg, T.G.1    Landsman, D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.