-
2
-
-
35448960252
-
Biofilms and biocomplexity
-
Sauer, K., Rickard, A. H. & Davies, D. G. Biofilms and biocomplexity. Microbe 2, 347-353 ( 2007 ). (Pubitemid 47619436)
-
(2007)
Microbe
, vol.2
, Issue.7
, pp. 347-353
-
-
Sauer, K.1
Rickard, A.H.2
Davies, D.G.3
-
3
-
-
2942574679
-
Biocorrosion: Towards understanding interactions between biofilms and metals
-
DOI 10.1016/j.copbio.2004.05.001, PII S0958166904000631
-
Beech, I. B. & Sunner, J. Biocorrosion: Towards understanding interactions between biofilms and metals. Curr. Opin. Biotechnol. 15, 181-186 ( 2004 ). (Pubitemid 38749038)
-
(2004)
Current Opinion in Biotechnology
, vol.15
, Issue.3
, pp. 181-186
-
-
Beech, I.B.1
Sunner, J.2
-
4
-
-
65549105192
-
Mini-review: Quorum sensing in the marine environment and its relationship to biofouling
-
Dobretsov, S., Teplitski, M. & Paul, V. Mini-review: Quorum sensing in the marine environment and its relationship to biofouling. Biofouling 2 5, 413-427 ( 2009 ).
-
(2009)
Biofouling
, vol.2
, Issue.5
, pp. 413-427
-
-
Dobretsov, S.1
Teplitski, M.2
Paul, V.3
-
5
-
-
78751634236
-
Engineering biofilm formation and dispersal
-
Wood, T. K., Hong, S. H. & Ma, Q. Engineering biofilm formation and dispersal. Trends Biotechnol. 29, 87-94 ( 2011 ).
-
(2011)
Trends Biotechnol.
, vol.29
, pp. 87-94
-
-
Wood, T.K.1
Hong, S.H.2
Ma, Q.3
-
6
-
-
49049105130
-
Engineering microbial consortia: A new frontier in synthetic biology
-
Brenner, K., You, L. & Arnold, F. H. Engineering microbial consortia: A new frontier in synthetic biology. Trends Biotechnol. 2 6, 483-489 ( 2008 ).
-
(2008)
Trends Biotechnol.
, vol.2
, Issue.6
, pp. 483-489
-
-
Brenner, K.1
You, L.2
Arnold, F.H.3
-
7
-
-
33744729365
-
A complex transcription network controls the early stages of biofilm development by Escherichia coli
-
DOI 10.1128/JB.01780-05
-
Prüß, B. M., Besemann, C., Denton, A. & Wolfe, A. J. A complex transcription network controls the early stages of biofilm development by Escherichia coli. J. Bacteriol. 188, 3731-3739 ( 2006 ). (Pubitemid 43825378)
-
(2006)
Journal of Bacteriology
, vol.188
, Issue.11
, pp. 3731-3739
-
-
Pruss, B.M.1
Besemann, C.2
Denton, A.3
Wolfe, A.J.4
-
8
-
-
0033047336
-
Inhibiting sulfate-reducing bacteria in biofilms by expressing the antimicrobial peptides indolicidin and bactenecin
-
DOI 10.1038/sj.jim.2900627
-
Jayaraman, A., Mansfeld, F. B. & Wood, T. K. Inhibiting sulfate-reducing bacteria in biofilms by expressing the antimicrobial peptides indolicidin and bactenecin. J. Ind. Microbiol. Biotechnol. 2 2, 167-175 ( 1999 ). (Pubitemid 29292127)
-
(1999)
Journal of Industrial Microbiology and Biotechnology
, vol.22
, Issue.3
, pp. 167-175
-
-
Jayaraman, A.1
Mansfeld, F.B.2
Wood, T.K.3
-
9
-
-
34347237865
-
Indole is an inter-species biofilm signal mediated by SdiA
-
Lee, J., Jayaraman, A. & Wood, T. K. Indole is an inter-species biofilm signal mediated by SdiA. BMC Microbiol. 7, 42 ( 2007 ).
-
(2007)
BMC Microbiol.
, vol.7
, pp. 42
-
-
Lee, J.1
Jayaraman, A.2
Wood, T.K.3
-
10
-
-
62149113666
-
Reconfi guring the quorumsensing regulator SdiA of Escherichia coli to control biofilm formation via indole and N-acylhomoserine lactones
-
Lee, J., Maeda, T., Hong, S. H. & Wood, T. K. Reconfi guring the quorumsensing regulator SdiA of Escherichia coli to control biofilm formation via indole and N-acylhomoserine lactones. Appl. Environ. Microbiol. 7 5, 1703-1716 ( 2009 ).
-
(2009)
Appl. Environ. Microbiol.
, vol.7
, Issue.5
, pp. 1703-1716
-
-
Lee, J.1
Maeda, T.2
Hong, S.H.3
Wood, T.K.4
-
11
-
-
77953577305
-
Controlling biofilm formation, prophage excision, and cell death by rewiring global regulator H-NS of Escherichia coli
-
Hong, S. H., Wang, X. & Wood, T. K. Controlling biofilm formation, prophage excision, and cell death by rewiring global regulator H-NS of Escherichia coli. Microb. Biotechnol. 3, 344-356 ( 2010 ).
-
(2010)
Microb. Biotechnol.
, vol.3
, pp. 344-356
-
-
Hong, S.H.1
Wang, X.2
Wood, T.K.3
-
13
-
-
0023811628
-
Chromosomal mutations that increase the production of a plasmid-encoded haemolysin in Escherichia coli
-
Godessart, N., Muñoa, F. J., Regue, M. & Juárez, A. Chromosomal mutations that increase the production of a plasmid-encoded haemolysin in Escherichia coli. J. Gen. Microbiol. 134, 2779-2787 ( 1988 ).
-
(1988)
J. Gen. Microbiol.
, vol.134
, pp. 2779-2787
-
-
Godessart, N.1
Munoa, F.J.2
Regue, M.3
Juárez, A.4
-
14
-
-
48749085459
-
Protein translation and cell death: The role of rare tRNAs in biofilm formation and in activating dormant phage killer genes
-
García-Contreras, R., Zhang, X.-S., Kim, Y. & Wood, T. K. Protein translation and cell death: The role of rare tRNAs in biofilm formation and in activating dormant phage killer genes. PLoS ONE 3, e2394 ( 2008 ).
-
(2008)
PLoS ONE
, vol.3
-
-
García-Contreras, R.1
Zhang, X.-S.2
Kim, Y.3
Wood, T.K.4
-
15
-
-
78349252715
-
Engineering global regulator Hha of Escherichia coli to control biofilm dispersal
-
Hong, S. H., Lee, J. & Wood, T. K. Engineering global regulator Hha of Escherichia coli to control biofilm dispersal. Microb. Biotechnol. 3, 717-728 ( 2010 ).
-
(2010)
Microb. Biotechnol.
, vol.3
, pp. 717-728
-
-
Hong, S.H.1
Lee, J.2
Wood, T.K.3
-
16
-
-
79952078501
-
Engineering a novel c-di-GMP-binding protein for biofilm dispersal
-
Ma, Q., Yang, Z., Pu, M., Peti, W. & Wood, T. K. Engineering a novel c-di-GMP-binding protein for biofilm dispersal. Environ. Microbiol. 13, 631-642 ( 2011 ).
-
(2011)
Environ. Microbiol.
, vol.13
, pp. 631-642
-
-
Ma, Q.1
Yang, Z.2
Pu, M.3
Peti, W.4
Wood, T.K.5
-
17
-
-
33750796181
-
A perspective of synthetic biology: Assembling building blocks for novel functions
-
Fu, P. A perspective of synthetic biology: Assembling building blocks for novel functions. Biotechnol. J. 1, 690-699 ( 2006 ).
-
(2006)
Biotechnol. J.
, vol.1
, pp. 690-699
-
-
Fu, P.1
-
18
-
-
66249088017
-
The second wave of synthetic biology: From modules to systems
-
Purnick, P. E. M. & Weiss, R. The second wave of synthetic biology: From modules to systems. Nat. Rev. Mol. Cell Biol. 10, 410-422 ( 2009 ).
-
(2009)
Nat. Rev. Mol. Cell Biol.
, vol.10
, pp. 410-422
-
-
Purnick, P.E.M.1
Weiss, R.2
-
19
-
-
57049175867
-
From unicellular properties to multicellular behavior: Bacteria quorum sensing circuitry and applications
-
Hooshangi, S. & Bentley, W. E. From unicellular properties to multicellular behavior: Bacteria quorum sensing circuitry and applications. Curr. Opin. Biotechnol. 1 9, 550-555 ( 2008 ).
-
(2008)
Curr. Opin. Biotechnol.
, vol.1
, Issue.9
, pp. 550-555
-
-
Hooshangi, S.1
Bentley, W.E.2
-
21
-
-
51149093453
-
Diffusible signals and interspecies communication in bacteria
-
Ryan, R. P. & Dow, J. M. Diffusible signals and interspecies communication in bacteria. Microbiology 1 54, 1845-1858 ( 2008 ).
-
(2008)
Microbiology
, vol.1
, Issue.54
, pp. 1845-1858
-
-
Ryan, R.P.1
Dow, J.M.2
-
22
-
-
75149191906
-
A synchronized quorum of genetic clocks
-
Danino, T., Mondragón-Palomino, O., Tsimring, L. & Hasty, J. A synchronized quorum of genetic clocks. Nature 463, 326-330 ( 2010 ).
-
(2010)
Nature
, vol.463
, pp. 326-330
-
-
Danino, T.1
Mondragón-Palomino, O.2
Tsimring, L.3
Hasty, J.4
-
23
-
-
1942467023
-
Programmed population control by cell-cell communication and regulated killing
-
DOI 10.1038/nature02491
-
You, L., Cox, R. S., Weiss, R. & Arnold, F. H. Programmed population control by cell-cell communication and regulated killing. Nature 428, 868-871 ( 2004 ). (Pubitemid 38529503)
-
(2004)
Nature
, vol.428
, Issue.6985
, pp. 868-871
-
-
You, L.1
Cox III, R.S.2
Weiss, R.3
Arnold, F.H.4
-
24
-
-
2942614884
-
Programmable cells: Interfacing natural and engineered gene networks
-
DOI 10.1073/pnas.0402940101
-
Kobayashi, H. et al. Programmable cells: Interfacing natural and engineered gene networks. Proc. Natl Acad. Sci. USA 101, 8414-8419 ( 2004 ). (Pubitemid 38736589)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.22
, pp. 8414-8419
-
-
Kobayashi, H.1
Kaern, M.2
Araki, M.3
Chung, K.4
Gardner, T.S.5
Cantor, C.R.6
Collins, J.J.7
-
25
-
-
63749104134
-
Quorum sensing and environmental adaptation in Pseudomonas aeruginosa : A tale of regulatory networks and multifunctional signal molecules
-
Williams, P. & Cámara, M. Quorum sensing and environmental adaptation in Pseudomonas aeruginosa : A tale of regulatory networks and multifunctional signal molecules. Curr. Opin. Microbiol. 1 2, 182-191 ( 2009 ).
-
(2009)
Curr. Opin. Microbiol.
, vol.1
, Issue.2
, pp. 182-191
-
-
Williams, P.1
Cámara, M.2
-
26
-
-
0030985995
-
Regulation of las and rhl quorum sensing in Pseudomonas aeruginosa
-
Pesci, E. C., Pearson, J. P., Seed, P. C. & Iglewski, B. H. Regulation of las and rhl quorum sensing in Pseudomonas aeruginosa. J. Bacteriol. 1 79, 3127-3132 ( 1997 ). (Pubitemid 27202984)
-
(1997)
Journal of Bacteriology
, vol.179
, Issue.10
, pp. 3127-3132
-
-
Pesci, E.C.1
Pearson, J.P.2
Seed, P.C.3
Iglewski, B.H.4
-
27
-
-
36849005857
-
Engineered bidirectional communication mediates a consensus in a microbial biofilm consortium
-
DOI 10.1073/pnas.0704256104
-
Brenner, K., Karig, D. K., Weiss, R. & Arnold, F. H. Engineered bidirectional communication mediates a consensus in a microbial biofilm consortium. Proc. Natl Acad. Sci. USA 104, 17300-17304 ( 2007 ). (Pubitemid 350219837)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.44
, pp. 17300-17304
-
-
Brenner, K.1
Karig, D.K.2
Weiss, R.3
Arnold, F.H.4
-
28
-
-
42149089190
-
A synthetic Escherichia coli predator-prey ecosystem
-
Balagaddé, F. K. et al. A synthetic Escherichia coli predator-prey ecosystem. Mol. Syst. Biol. 4, 187 ( 2008 ).
-
(2008)
Mol. Syst. Biol.
, vol.4
, pp. 187
-
-
Balagaddé, F.K.1
-
29
-
-
38949100734
-
Design and mathematical modelling of a synthetic symbiotic ecosystem
-
DOI 10.1049/iet-syb:20070011
-
Kambam, P. K. R., Henson, M. A. & Sun, L. Design and mathematical modelling of a synthetic symbiotic ecosystem. IET Syst. Biol. 2, 33-38 ( 2008 ). (Pubitemid 351217540)
-
(2008)
IET Systems Biology
, vol.2
, Issue.1
, pp. 33-38
-
-
Kambam, P.K.R.1
Henson, M.A.2
Sun, L.3
-
30
-
-
79951803084
-
Self-organization, layered structure, and aggregation enhance persistence of a synthetic biofilm consortium
-
Brenner, K. & Arnold, F. H. Self-organization, layered structure, and aggregation enhance persistence of a synthetic biofilm consortium. PLoS ONE 6, e16791 ( 2011 ).
-
(2011)
PLoS ONE
, vol.6
-
-
Brenner, K.1
Arnold, F.H.2
-
31
-
-
31544450286
-
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: The Keio collection
-
2006.0008
-
Baba, T. et al. Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: The Keio collection. Mol. Syst. Biol. 2, 2006.0008 ( 2006 ).
-
(2006)
Mol. Syst. Biol.
, vol.2
-
-
Baba, T.1
-
32
-
-
0035007851
-
Assessment of GFP fluorescence in cells of Streptoccus gordonii under conditions of low pH and low oxygen concentration
-
Hansen, M. C., Palmer, R. J. Jr, Udsen, C., White, D. C. & Molin, S. Assessment of GFP fluorescence in cells of Streptococcus gordonii under conditions of low pH and low oxygen concentration. Microbiology 147, 1383-1391 ( 2001 ). (Pubitemid 32454655)
-
(2001)
Microbiology
, vol.147
, Issue.5
, pp. 1383-1391
-
-
Hansen, M.C.1
Palmer Jr., R.J.2
Udsen, C.3
White, D.C.4
Molin, S.5
-
33
-
-
0028967496
-
Activation of the Pseudomonas aeruginosa lasI gene by LasR and the Pseudomonas autoinducer PAI: An autoinduction regulatory hierarchy
-
Seed, P., Passador, L. & Iglewski, B. Activation of the Pseudomonas aeruginosa lasI gene by LasR and the Pseudomonas autoinducer PAI: An autoinduction regulatory hierarchy. J. Bacteriol. 1 77, 654-659 ( 1995 ).
-
(1995)
J. Bacteriol.
, vol.1
, Issue.77
, pp. 654-659
-
-
Seed, P.1
Passador, L.2
Iglewski, B.3
-
34
-
-
33646568438
-
Complete set of ORF clones of Escherichia coli ASKA library (a complete set of E. coli K-12 ORF archive): Unique resources for biological research
-
Kitagawa, M. et al. Complete set of ORF clones of Escherichia coli ASKA library (a complete set of E. coli K-12 ORF archive): Unique resources for biological research. DNA Res. 12, 291-299 ( 2005 ).
-
(2005)
DNA Res.
, vol.12
, pp. 291-299
-
-
Kitagawa, M.1
-
35
-
-
0028012702
-
Structure of the autoinducer required for expression of Pseudomonas aeruginosa virulence genes
-
DOI 10.1073/pnas.91.1.197
-
Pearson, J. P. et al. Structure of the autoinducer required for expression of Pseudomonas aeruginosa virulence genes. Proc. Natl Acad. Sci. USA 9 1, 197-201 ( 1994 ). (Pubitemid 24018670)
-
(1994)
Proceedings of the National Academy of Sciences of the United States of America
, vol.91
, Issue.1
, pp. 197-201
-
-
Pearson, J.P.1
Gray, K.M.2
Passador, L.3
Tucker, K.D.4
Eberhard, A.5
Iglewski, B.H.6
Greenberg, E.P.7
-
36
-
-
0034548838
-
A novel and sensitive method for the quantification of N-3-oxoacyl homoserine lactones using gas chromatography-mass spectrometry: Application to a model bacterial biofilm
-
DOI 10.1046/j.1462-2920.2000.00136.x
-
Charlton, T. S. et al. A novel and sensitive method for the quantification of N-3-oxoacyl homoserine lactones using gas chromatography-mass spectrometry: Application to a model bacterial biofilm. Environ. Microbiol. 2, 530-541 ( 2000 ). (Pubitemid 33136691)
-
(2000)
Environmental Microbiology
, vol.2
, Issue.5
, pp. 530-541
-
-
Charlton, T.S.1
De Nys, R.2
Netting, A.3
Kumar, N.4
Hentzer, M.5
Givskov, M.6
Kjelleberg, S.7
-
37
-
-
79954550382
-
Quorum sensing between Pseudomonas aeruginosa biofilms accelerates cell growth
-
Flickinger, S. T. et al. Quorum sensing between Pseudomonas aeruginosa biofilms accelerates cell growth. J. Am. Chem. Soc. 133, 5966-5975 ( 2011 ).
-
(2011)
J. Am. Chem. Soc.
, vol.133
, pp. 5966-5975
-
-
Flickinger, S.T.1
-
38
-
-
0032989877
-
Active efflux and diffusion are involved in transport of Pseudomonas aeruginosa cell-to-cell signals
-
Pearson, J. P., Van Delden, C. & Iglewski, B. H. Active efflux and diffusion are involved in transport of Pseudomonas aeruginosa cell-to-cell signals. J. Bacteriol. 1 81, 1203-1210 ( 1999 ). (Pubitemid 29119559)
-
(1999)
Journal of Bacteriology
, vol.181
, Issue.4
, pp. 1203-1210
-
-
Pearson, J.P.1
Van Delden, C.2
Iglewski, B.H.3
-
39
-
-
77949902368
-
Biofilm dispersal: Mechanisms, clinical implications, and potential therapeutic uses
-
Kaplan, J. B. Biofilm dispersal: Mechanisms, clinical implications, and potential therapeutic uses. J. Dent. Res. 89, 205-218 ( 2010 ).
-
(2010)
J. Dent. Res.
, vol.89
, pp. 205-218
-
-
Kaplan, J.B.1
-
40
-
-
34447554517
-
The challenge of treating biofilm-associated bacterial infections
-
DOI 10.1038/sj.clpt.6100247, PII 6100247
-
del Pozo, J. L. & Patel, R. The challenge of treating biofilm-associated bacterial infections. Clin. Pharmacol. Ther. 82, 204-209 ( 2007 ). (Pubitemid 47075342)
-
(2007)
Clinical Pharmacology and Therapeutics
, vol.82
, Issue.2
, pp. 204-209
-
-
Del Pozo, J.L.1
Patel, R.2
-
41
-
-
0035949544
-
Characterization of biofilm growth and biocide susceptibility testing of Mycobacterium phlei using the MBEC™ assay system
-
DOI 10.1016/S0378-1097(01)00364-0, PII S0378109701003640
-
Bardouniotis, E., Huddleston, W., Ceri, H. & Olson, M. E. Characterization of biofilm growth and biocide susceptibility testing of Mycobacterium phlei using the MBEC™ assay system. FEMS Microbiol. Lett. 2 03, 263-267 ( 2001 ). (Pubitemid 32913625)
-
(2001)
FEMS Microbiology Letters
, vol.203
, Issue.2
, pp. 263-267
-
-
Bardouniotis, E.1
Huddleston, W.2
Ceri, H.3
Olson, M.E.4
-
42
-
-
43049135194
-
Agr-mediated dispersal of Staphylococcus aureus biofilms
-
Boles, B. R. & Horswill, A. R. Agr-mediated dispersal of Staphylococcus aureus biofilms. PLoS Pathog. 4, e1000052 ( 2008 ).
-
(2008)
PLoS Pathog.
, vol.4
-
-
Boles, B.R.1
Horswill, A.R.2
-
43
-
-
6044226882
-
Characterization of nutrient-induced dispersion in Pseudomonas aeruginosa PAO1 biofilm
-
DOI 10.1128/JB.186.21.7312-7326.2004
-
Sauer, K. et al. Characterization of nutrient-induced dispersion in Pseudomonas aeruginosa PAO1 biofilm. J. Bacteriol. 1 86, 7312-7326 ( 2004 ). (Pubitemid 39383116)
-
(2004)
Journal of Bacteriology
, vol.186
, Issue.21
, pp. 7312-7326
-
-
Sauer, K.1
Cullen, M.C.2
Rickard, A.H.3
Zeef, L.A.H.4
Davies, D.G.5
Gilbert, P.6
-
44
-
-
23844545200
-
Rhamnolipids mediate detachment of Pseudomonas aeruginosa from biofilms
-
DOI 10.1111/j.1365-2958.2005.04743.x
-
Boles, B. R., Thoendel, M. & Singh, P. K. Rhamnolipids mediate detachment of Pseudomonas aeruginosa from biofilms. Mol. Microbiol. 5 7, 1210-1223 ( 2005 ). (Pubitemid 41176519)
-
(2005)
Molecular Microbiology
, vol.57
, Issue.5
, pp. 1210-1223
-
-
Boles, B.R.1
Thoendel, M.2
Singh, P.K.3
-
45
-
-
62649114601
-
A fatty acid messenger is responsible for inducing dispersion in microbial biofilms
-
Davies, D. G. & Marques, C. N. H. A fatty acid messenger is responsible for inducing dispersion in microbial biofilms. J. Bacteriol. 1 91, 1393-1403 ( 2009 ).
-
(2009)
J. Bacteriol.
, vol.1
, Issue.91
, pp. 1393-1403
-
-
Davies, D.G.1
Marques, C.N.H.2
-
46
-
-
77951865142
-
D-amino acids trigger biofilm disassembly
-
Kolodkin-Gal, I. et al. D-amino acids trigger biofilm disassembly. Science 3 28, 627-629 ( 2010 ).
-
(2010)
Science
, vol.328
, pp. 627-629
-
-
Kolodkin-Gal, I.1
-
47
-
-
77954266296
-
New device for high-throughput viability screening of flow biofilms
-
Benoit, M. R., Conant, C. G., Ionescu-Zanetti, C., Schwartz, M. & Matin, A. New device for high-throughput viability screening of flow biofilms. Appl. Environ. Microbiol. 76, 4136-4142 ( 2010 ).
-
(2010)
Appl. Environ. Microbiol.
, vol.76
, pp. 4136-4142
-
-
Benoit, M.R.1
Conant, C.G.2
Ionescu-Zanetti, C.3
Schwartz, M.4
Matin, A.5
-
48
-
-
47749112521
-
Microfluidic devices for studying growth and detachment of S taphylococcus epidermidis biofilms
-
Lee, J.-H., Kaplan, J. & Lee, W. Microfluidic devices for studying growth and detachment of S taphylococcus epidermidis biofilms. Biomed. Microdevices 10, 489-498 ( 2008 ).
-
(2008)
Biomed. Microdevices
, vol.10
, pp. 489-498
-
-
Lee, J.-H.1
Kaplan, J.2
Lee, W.3
-
50
-
-
77951933436
-
Co-culture of epithelial cells and bacteria for investigating host-pathogen interactions
-
Kim, J., Hegde, M. & Jayaraman, A. Co-culture of epithelial cells and bacteria for investigating host-pathogen interactions. Lab Chip 10, 43-50 ( 2010 ).
-
(2010)
Lab Chip
, vol.10
, pp. 43-50
-
-
Kim, J.1
Hegde, M.2
Jayaraman, A.3
|