Identification of Escherichia coli genes associated with urinary tract infections

Journal of Clinical Microbiology

Volumn 50, Issue 2, 2012, Pages 449-456

  Mao, Bin Hsu ^a   Chang, Yung Fu ^b   Scaria, Joy ^b   Chang, Chih Ching ^a   Chou, Li Wei ^c   Tien, Ni ^c   Wu, Jiunn Jong ^a,g   Tseng, Chin Chung ^d   Wang, Ming Cheng ^d   Chang, Chao Chin ^e   Hsu, Yuan Man ^f   Teng, Ching Hao ^a,g  

^a NATIONAL CHENG KUNG UNIVERSITY   (Taiwan)

^b Department of Obstetrics Gynecology   (United States)

^c CHINA MEDICAL UNIVERSITY HOSPITAL   (Taiwan)

^d NATIONAL CHENG KUNG UNIVERSITY HOSPITAL   (Taiwan)

^e NATIONAL CHUNG HSING UNIVERSITY   (Taiwan)

^f CHINA MEDICAL UNIVERSITY   (Taiwan)

^g NATIONAL CHENG KUNG UNIVERSITY   (Taiwan)

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC DNA; UNCLASSIFIED DRUG; UROVIRULENCE FACTOR; VIRULENCE FACTOR;

ARTICLE; BACTERIAL GENE; BACTERIAL STRAIN; BACTERIAL VIRULENCE; BACTERIUM ISOLATE; CJRA GENE; CJRB GENE; CJRC GENE; CONTROLLED STUDY; CYSTITIS; DNA MICROARRAY; ECO274 GENE; ESCHERICHIA COLI; FBPB GENE; FECES CULTURE; GENE CLUSTER; GENE IDENTIFICATION; GENETIC ASSOCIATION; HUMAN; MAJOR CLINICAL STUDY; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PYELONEPHRITIS; SENB GENE; SISA GENE; SISB GENE; SIVH GENE; URINARY TRACT INFECTION; UROPATHOGENIC ESCHERICHIA COLI; UROSEPSIS;

ESCHERICHIA COLI INFECTIONS; ESCHERICHIA COLI PROTEINS; GENES, BACTERIAL; HUMANS; MICROARRAY ANALYSIS; POLYMERASE CHAIN REACTION; URINARY TRACT INFECTIONS; UROPATHOGENIC ESCHERICHIA COLI; VIRULENCE FACTORS;

ESCHERICHIA COLI;

EID: 84862925153     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.00640-11     Document Type: Article

References (39)

1. Alteri CJ, Hagan EC, Sivick KE, Smith SN, Mobley HL. 2009. Mucosal immunization with iron receptor antigens protects against urinary tract infection. PLoS Pathog. 5:e1000586.
2. Brzuszkiewicz E, et al. 2006. How to become a uropathogen: comparative genomic analysis of extraintestinal pathogenic Escherichia coli strains. Proc. Natl. Acad. Sci. U. S. A. 103:12879-12884. (Pubitemid 44298655)
3. Chapman TA, et al. 2006. Comparison of virulence gene profiles of Escherichia coli strains isolated from healthy and diarrheic swine. Appl. Environ. Microbiol. 72:4782-4795. (Pubitemid 44078805)
4. Chen SL, et al. 2006. Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach. Proc. Natl. Acad. Sci. U. S. A. 103:5977-5982.
5. Clermont O, Bonacorsi S, Bingen E. 2000. Rapid and simple determination of the Escherichia coli phylogenetic group. Appl. Environ. Microbiol. 66:4555-4558.
6. Cusumano CK, Hung CS, Chen SL, Hultgren SJ. 2010. Virulence plasmid harbored by uropathogenic Escherichia coli functions in acute stages of pathogenesis. Infect. Immun. 78:1457-1467.
7. Goullet P, Picard B. 1986. Highly pathogenic strains of Escherichia coli revealed by the distinct electrophoretic patterns of carboxylesterase B. J. Gen. Microbiol. 132:1853-1858. (Pubitemid 16061886)
8. Grüneberg RN. 1969. Relationship of infecting urinary organism to the faecal flora in patients with symptomatic urinary infection. Lancet ii:766-768.
9. Hagan EC, Lloyd AL, Rasko DA, Faerber GJ, Mobley HL. 2010. Escherichia coli global gene expression in urine from women with urinary tract infection. PLoS Pathog. 6:e1001187.
10. Ingersoll MA, et al. 2003. The ShiA protein encoded by the Shigella flexneri SHI-2 pathogenicity island attenuates inflammation. Cell. Microbiol. 5:797-807. (Pubitemid 37304363)
11. Ingersoll MA, Zychlinsky A. 2006. ShiA abrogates the innate T-cell response to Shigella flexneri infection. Infect. Immun. 74:2317-2327.
12. Johnson JR, Delavari P, Kuskowski M, Stell AL. 2001. Phylogenetic distribution of extraintestinal virulence-associated traits in Escherichia coli. J. Infect. Dis. 183:78-88. (Pubitemid 32043044)
13. Johnson JR, Kaster N, Kuskowski MA, Ling GV. 2003. Identification of urovirulence traits in Escherichia coli by comparison of urinary and rectal E. coli isolates from dogs with urinary tract infection. J. Clin. Microbiol. 41:337-345. (Pubitemid 36098597)
14. Johnson JR, O'Bryan TT, Kuskowski M, Maslow JN. 2001. Ongoing horizontal and vertical transmission of virulence genes and papA alleles among Escherichia coli blood isolates from patients with diverse-source bacteremia. Infect. Immun. 69:5363-5374. (Pubitemid 32786468)
15. Johnson JR, Russo TA. 2005. Molecular epidemiology of extraintestinal pathogenic (uropathogenic) Escherichia coli. Int. J. Med. Microbiol. 295: 383-404. (Pubitemid 41226501)
16. Johnson JR, Stell AL. 2000. Extended virulence genotypes of Escherichia coli strains from patients with urosepsis in relation to phylogeny and host compromise. J. Infect. Dis. 181:261-272. (Pubitemid 30049057)
17. Kingsley RA, et al. 2003. Molecular and phenotypic analysis of the CS54 island of Salmonella enterica serotype Typhimurium: identification of intestinal colonization and persistence determinants. Infect. Immun. 71: 629-640. (Pubitemid 36150754)
18. Klein T, et al. 2010. FimH antagonists for the oral treatment of urinary tract infections: from design and synthesis to in vitro and in vivo evaluation. J. Med. Chem. 53:8627-8641.
19. Langermann S, et al. 1997. Prevention of mucosal Escherichia coli infection by FimH-adhesin-based systemic vaccination. Science 276:607-611. (Pubitemid 27193687)
20. Lloyd AL, Henderson TA, Vigil PD, Mobley HL. 2009. Genomic islands of uropathogenic Escherichia coli contribute to virulence. J. Bacteriol. 191: 3469-3481.
21. Lloyd AL, Rasko DA, Mobley HL. 2007. Defining genomic islands and uropathogen-specific genes in uropathogenic Escherichia coli. J. Bacteriol. 189:3532-3546. (Pubitemid 46668818)
22. Lloyd AL, Smith SN, Eaton KA, Mobley HL. 2009. Uropathogenic Escherichia coli suppresses the host inflammatory response via pathogenicity island genes sisA and sisB. Infect. Immun. 77:5322-5333.
23. Marrs CF, Zhang L, Foxman B. 2005. Escherichia coli mediated urinary tract infections: are there distinct uropathogenic E. coli (UPEC) pathotypes? FEMS Microbiol. Lett. 252:183-190. (Pubitemid 41531642)
24. McClelland M, et al. 2001. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. Nature 413:852-856. (Pubitemid 33026853)
25. Moss JE, Cardozo TJ, Zychlinsky A, Groisman EA. 1999. The selC-associated SHI-2 pathogenicity island of Shigella flexneri. Mol. Microbiol. 33:74-83. (Pubitemid 29304190)
26. Nataro JP, et al. 1995. Identification and cloning of a novel plasmiden-coded enterotoxin of enteroinvasive Escherichia coli and Shigella strains. Infect. Immun. 63:4721-4728.
27. Palaniappan RU, et al. 2006. Differentiation of Escherichia coli pathotypes by oligonucleotide spotted array. J. Clin. Microbiol. 44:1495-1501.
28. Parham NJ, et al. 2005. Prevalence of pathogenicity island IICFT073 genes among extraintestinal clinical isolates of Escherichia coli. J. Clin. Microbiol. 43:2425-2434. (Pubitemid 40656260)
29. Perna NT, et al. 2001. Genome sequence of enterohaemorrhagic Escherichia coli O157:H7. Nature 409:529-533. (Pubitemid 32144360)
30. Picard B, et al. 1999. The link between phylogeny and virulence in Escherichia coli extraintestinal infection. Infect. Immun. 67:546-553. (Pubitemid 29059185)
31. Seed PC, Hultgren SJ. 2005. Blueprinting the regulatory response of Escherichia coli to the urinary tract. Trends Microbiol. 13:246-248. (Pubitemid 40779809)
32. Smajs D, Weinstock GM. 2001. The iron- and temperature-regulated cjrBC genes of Shigella and enteroinvasive Escherichia coli strains code for colicin Js uptake. J. Bacteriol. 183:3958-3966. (Pubitemid 32565475)
33. Soto SM, Guiral E, Bosch J, Vila J. 2009. Prevalence of the set-1B and astA genes encoding enterotoxins in uropathogenic Escherichia coli clinical isolates. Microb. Pathog. 47:305-307.
34. Touchon M, et al. 2009. Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths. PLoS Genet. 5:e1000344.
35. Tseng CC, Huang JJ, Ko WC, Yan JJ, Wu JJ. 2001. Decreased predominance of papG class II allele in Escherichia coli strains isolated from adults with acute pyelonephritis and urinary tract abnormalities. J. Urol. 166: 1643-1646.
36. Vokes SA, Reeves SA, Torres AG, Payne SM. 1999. The aerobactin iron transport system genes in Shigella flexneri are present within a pathogenicity island. Mol. Microbiol. 33:63-73. (Pubitemid 29304189)
37. Wang MC, et al. 2009. Different roles of host and bacterial factors in Escherichia coli extra-intestinal infections. Clin. Microbiol. Infect. 15:372-379.
38. Welch RA, et al. 2002. Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli. Proc. Natl. Acad. Sci. U. S. A. 99:17020-17024. (Pubitemid 36034091)
39. Xie Y, et al. 2006. Identification and characterization of Escherichia coli RS218-derived islands in the pathogenesis of E. coli meningitis. J. Infect. Dis. 194:358-364. (Pubitemid 44116978)