Genotypes of Mycobacterium avium subsp. paratuberculosis from South American countries determined by two methods based on genomic repetitive sequences

Tropical Animal Health and Production

Volumn 44, Issue 6, 2012, Pages 1123-1126

  Fernández Silva, Jorge Arturo ^a,b   Abdulmawjood, Amir ^a   Akineden, Ömer ^a   Bülte, Michael ^a  

^a JUSTUS LIEBIG UNIVERSITY   (Germany)

^b UNIVERSIDAD DE ANTIOQUIA   (Colombia)

Author keywords

Genotyping; MIRU VNTR; MLSSR; Mycobacterium avium subsp. paratuberculosis; South America

Indexed keywords

ARTICLE; DNA SEQUENCE; GENETIC VARIABILITY; GENETICS; GENOTYPE; INTERSPERSED REPEAT; MYCOBACTERIUM PARATUBERCULOSIS; REAL TIME POLYMERASE CHAIN REACTION; SOUTH AMERICA; VARIABLE NUMBER OF TANDEM REPEAT;

GENETIC VARIATION; GENOTYPE; INTERSPERSED REPETITIVE SEQUENCES; MINISATELLITE REPEATS; MYCOBACTERIUM AVIUM SUBSP. PARATUBERCULOSIS; REAL-TIME POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS, DNA; SOUTH AMERICA;

ANIMALIA; BOVIDAE; MYCOBACTERIUM AVIUM SUBSP. PARATUBERCULOSIS;

EID: 84862890259     PISSN: 00494747     EISSN: 15737438     Source Type: Journal    
DOI: 10.1007/s11250-011-0060-6     Document Type: Article

References (15)

1. Amonsin, A., L. L. Li, Q. Zhang, J. P. Bannantine, A. S. Motiwala, S. Sreevatsan and V. Kapur, 2004. Multilocus short sequence repeat sequencing approach for differentiating among Mycobacterium avium subsp. paratuberculosis strains. Journal of Clinical Microbiology, 42, 1694-1702.
2. Bull, T. J., K. Sidi-Boumedine, E. J. McMinn, K. Stevenson, R. Pickup and J. Hermon-Taylor, 2003. Mycobacterial interspersed repetitive units (MIRU) differentiate Mycobacterium avium subspecies paratuberculosis from other species of the Mycobacterium avium complex. Molecular and cellular Probes, 17, 157-164.
3. Castellanos, E., B. Romero, S. Rodriguez, L. de Juan, J. Bezos, A. Mateos, L. Dominguez and A. Aranaz, 2010. Molecular characterization of Mycobacterium avium subspecies paratuberculosis Types II and III isolates by a combination of MIRU-VNTR loci. Veterinary Microbiology, 144, 118-126.
4. Cernicchiaro, N., S. J. Wells, H. Janagama and S. Sreevatsan, 2008. Influence of type of culture medium on characterization of Mycobacterium avium subsp. paratuberculosis subtypes. Journal of Clinical Microbiology, 46, 145-149.
5. Chacon, O., L. E. Bermudez and R. G. Barletta, 2004. Johne's disease, inflammatory bowel disease, and Mycobacterium paratuberculosis. Annual Review of Microbiology, 58, 329-363.
6. Fernandez-Silva, J. A., A. Abdulmawjood and M. Bulte, 2011. Diagnosis and molecular characterization of Mycobacterium avium subsp. paratuberculosis from dairy cows in Colombia. Veterinary Medicine International, 352561.
7. Gollnick, N. S., R. M. Mitchell, M. Baumgart, H. K. Janagama, S. Sreevatsan and Y. H. Schukken, 2007. Survival of Mycobacterium avium subsp. paratuberculosis in bovine monocyte-derived macrophages is not affected by host infection status but depends on the infecting bacterial genotype. Veterinary Immunology and Immunopathology, 120, 93-105.
8. Harris, N. B., J. B. Payeur, V. Kapur and S. Sreevatsan, 2006. Short-sequence-repeat analysis of Mycobacterium avium subsp. paratuberculosis and Mycobacterium avium subsp. avium isolates collected from animals throughout the United States reveals both stability of loci and extensive diversity. Journal of Clinical Microbiology, 44, 2970-2973.
9. Moreira, A. R., F. Paolicchi, C. Morsella, M. Zumarraga, A. Cataldi, B. Fabiana, A. Alicia, O. Piet, D. van Soolingen and M. I. Romano, 1999. Distribution of IS900 restriction fragment length polymorphism types among animal Mycobacterium avium subsp. paratuberculosis isolates from Argentina and Europe. Veterinary Microbiology, 70, 251-259.
10. Overduin, P., L. Schouls, P. Roholl, Z. A. van der, N. Mahmmod, A. Herrewegh and D. van Soolingen, 2004. Use of multilocus variable-number tandem-repeat analysis for typing Mycobacterium avium subsp. paratuberculosis. Journal of Clinical Microbiology, 42, 5022-5028.
11. Salgado, M., E. J. B. Manning, G. Monti, G. Bolske, R. Soderlund, M. Ruiz, E. Paredes, S. Leiva, H. van Kruningen and J. Kruze, 2011. European hares in Chile: a different lagomorph reservoir for Mycobacterium avium subsp. paratuberculosis? Journal of Wildlife Diseases, 47, 734-738.
12. Schönenbrücher, H., A. Abdulmawjood, K. Failing and M. Bülte, 2008. New triplex real-time PCR assay for detection of Mycobacterium avium subsp. paratuberculosis in bovine feces. Applied and Environmental Microbiology, 74, 2751-2758.
13. Stevenson, K., J. Alvarez, D. Bakker, F. Biet, L. de Juan, S. Denham, Z. Dimareli, K. Dohmann, G. F. Gerlach, I. Heron, M. Kopecna, L. May, I. Pavlik, J. M. Sharp, V. C. Thibault, P. Willemsen, R. N. Zadoks and A. Greig, 2009. Occurrence of Mycobacterium avium subspecies paratuberculosis across host species and European countries with evidence for transmission between wildlife and domestic ruminants. BMC Microbiology, 9, 212.
14. Thibault, V. C., M. Grayon, M. L. Boschiroli, C. Hubbans, P. Overduin, K. Stevenson, M. C. Gutierrez, P. Supply and F. Biet, 2007. New variable-number tandem-repeat markers for typing Mycobacterium avium subsp. paratuberculosis and M. avium strains: comparison with IS900 and IS1245 restriction fragment length polymorphism typing. Journal of Clinical Microbiology, 45, 2404-2410.
15. Thibault, V. C., M. Grayon, M. L. Boschiroli, E. Willery, C. Allix-Beguec, K. Stevenson, F. Biet and P. Supply, 2008: Combined multilocus short-sequence-repeat and mycobacterial interspersed repetitive unit-variable-number tandem-repeat typing of Mycobacterium avium subsp. paratuberculosis isolates, Journal of Clinical Microbiology, 46, 4091-4094.