Selective adsorption of lattice peptides on patterned surfaces

Physical Review E - Statistical, Nonlinear, and Soft Matter Physics

Volumn 85, Issue 6, 2012, Pages

  Swetnam, Adam ^a   Allen, Michael P ^a  

^a UNIVERSITY OF WARWICK   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ADSORPTION SITE; CONFINING WALLS; ENTROPIC EFFECTS; IMPLICIT SOLVENTS; MONTE CARLO ALGORITHMS; PATTERNED SURFACE; PLANAR SURFACE; SELECTIVE ADSORPTION; SURFACE SELECTION; TEMPERATURE-INDUCED;

ADSORPTION; ENTROPY;

PEPTIDES;

EID: 84862869151     PISSN: 15393755     EISSN: 15502376     Source Type: Journal    
DOI: 10.1103/PhysRevE.85.062901     Document Type: Article

References (33)

1. C. Tamerler and M. Sarikaya, ACS Nano 1936-0851 10.1021/nn900720g 3, 1606 (2009).
2. J. M. Slocik and R. R. Naik, Chem. Soc. Rev. 0306-0012 10.1039/b918035b 39, 3454 (2010).
3. U. O. S. Seker and H. V. Demir, Molecules 1420-3049 10.3390/ molecules16021426 16, 1426 (2011).
4. R. A. Metzler, J. S. Evans, C. E. Killian, D. Zhou, T. H. Churchill, N. P. Appathurai, S. N. Coppersmith, and P. U. P. A. Gilbert, J. Am. Chem. Soc. JACSAT 0002-7863 10.1021/ja909735y 132, 6329 (2010).
5. C. B. Ponce and J. S. Evans, Cryst. Growth Des. CGDEFU 1528-7483 10.1021/cg201015w 11, 4690 (2011).
6. S. V. Patwardhan, F. S. Emami, R. J. Berry, S. E. Jones, R. R. Naik, O. Deschaume, H. Heinz, and C. C. Perry, J. Am. Chem. Soc. JACSAT 0002-7863 10.1021/ja211307u 134, 6244 (2012).
7. H. Heinz, B. L. Farmer, R. B. Pandey, J. M. Slocik, S. S. Patnaik, R. Pachter, and R. R. Naik, J. Am. Chem. Soc. JACSAT 0002-7863 10.1021/ja900531f 131, 9704 (2009).
8. M. Hoefling, F. Iori, S. Corni, and K.-E. Gottschalk, Langmuir LANGD5 0743-7463 10.1021/la904765u 26, 8347 (2010).
9. J. Schneider and L. C. Ciacchi, J. Am. Chem. Soc. JACSAT 0002-7863 10.1021/ja210744g 134, 2407 (2012).
10. L. B. Wright and T. R. Walsh, J. Phys. Chem. C 116, 2933 (2012).
11. T. Bereau and M. Deserno, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.3152842 130, 235106 (2009).
12. M. Cheon, I. Chang, and C. K. Hall, Proteins: Structure Function and Bioinformatics 18PLAF 0887-3585 10.1002/prot.22817 78, 2950 (2010).
13. Y. Wang and G. A. Voth, J. Phys. Chem. B JPCBFK 1520-6106 10.1021/jp1007768 114, 8735 (2010).
14. K. F. Lau and K. A. Dill, Macromolecules MAMOBX 0024-9297 10.1021/ma00200a030 22, 3986 (1989).
15. Y. W. Li, T. Wuest, and D. P. Landau, Comput. Phys. Commun. CPHCBZ 0010-4655 10.1016/j.cpc.2010.12.049 182, 1896 (2011).
16. F. G. Wang and D. P. Landau, Phys. Rev. Lett. PRLTAO 0031-9007 10.1103/PhysRevLett.86.2050 86, 2050 (2001). (Pubitemid 32254758)
17. R. E. Belardinelli and V. D. Pereyra, Phys. Rev. E PLEEE8 1539-3755 10.1103/PhysRevE.75.046701 75, 046701 (2007). (Pubitemid 46559785)
18. R. E. Belardinelli and V. D. Pereyra, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.2803061 127, 184105 (2007). (Pubitemid 350115910)
19. C. Zhou and J. Su, Phys. Rev. E PLEEE8 1539-3755 10.1103/PhysRevE.78. 046705 78, 046705 (2008).
20. A. D. Swetnam and M. P. Allen, J. Comput. Chem. JCCHDD 0192-8651 10.1002/jcc.21660 32, 816 (2011).
21. N. Lesh, M. Mitzenmacher, and S. Whitesides, in Proc. 7th Ann. Int. Conf. Research in Computational Molecular Biology, edited by, M. Vingron, S. Istrail, P. Pevzner, and, M. Waterman, (ACM, New York, 2003), pp. 188-195.
22. T. Wüst and D. P. Landau, Comput. Phys. Commun. CPHCBZ 0010-4655 10.1016/j.cpc.2008.01.028 179, 124 (2008).
23. A. D. Swetnam and M. P. Allen, Phys. Chem. Chem. Phys. PPCPFQ 1463-9076 10.1039/b818067a 11, 2046 (2009).
24. M. Moeddel, W. Janke, and M. Bachmann, Macromolecules MAMOBX 0024-9297 10.1021/ma201307c 44, 9013 (2011).
25. T. Vrbová and S. G. Whittington, J. Phys. A: Math. Gen. JPHAC5 0305-4470 10.1088/0305-4470/31/17/009 27, 3989 (1998). (Pubitemid 128063582)
26. Y. Singh, D. Giri, and S. Kumar, J. Phys. A: Math. Gen. JPHAC5 0305-4470 10.1088/0305-4470/34/8/102 34, L67 (2001).
27. A. L. Owczarek, A. Rechnitzer, J. Krawczyk, and T. Prellberg, J. Phys. A: Math. Gen. 1751-8113 10.1088/1751-8113/40/44/007 40, 13257 (2007).
28. J. Luettmer-Strathmann, F. Rampf, W. Paul, and K. Binder, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.2837459 128, 064903 (2008). (Pubitemid 351264597)
29. M. Bachmann and W. Janke, Phys. Rev. Lett. PRLTAO 0031-9007 10.1103/PhysRevLett.95.058102 95, 058102 (2005). (Pubitemid 41506181)
30. M. Bachmann and W. Janke, Phys. Rev. E PLEEE8 1539-3755 10.1103/PhysRevE.73.041802 73, 041802 (2006).
31. M. Radhakrishna, S. Sharma, and S. K. Kumar, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.3691669 136, 114114 (2012).
32. K. Z. Yue and K. A. Dill, Phys. Rev. E PLEEE8 1539-3755 10.1103/PhysRevE.48.2267 48, 2267 (1993).
33. F. T. Wall, W. A. Seitz, J. C. Chin, and F. Mandel, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.434886 67, 434 (1977).