메뉴 건너뛰기




Volumn 157, Issue 4, 2012, Pages 753-759

Genomic characterization of a cell-culture-adapted Korean human G9P[8] rotavirus, CAU05-202

Author keywords

[No Author keywords available]

Indexed keywords

CAPSID PROTEIN; GLYCOPROTEIN; NS28 PROTEIN, ROTAVIRUS; TOXIN; VIRUS ANTIGEN; VIRUS PROTEIN; VIRUS RNA; VP4 PROTEIN, ROTAVIRUS; VP6 PROTEIN, ROTAVIRUS; VP7 PROTEIN, ROTAVIRUS;

EID: 84862818323     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-012-1232-z     Document Type: Article
Times cited : (3)

References (35)
  • 2
    • 34249897539 scopus 로고    scopus 로고
    • Brazilian P[8], G1, P[8], G5, P[8], G9, and P[4], G2 rotavirus strains: nucleotide sequence and phylogenetic analysis
    • Araújo IT, Assis RM, Fialho AM, Mascarenhas JD, Heinemann MB, Leite JP (2007) Brazilian P[8], G1, P[8], G5, P[8], G9, and P[4], G2 rotavirus strains: nucleotide sequence and phylogenetic analysis. J Med Virol 79(7): 995-1001.
    • (2007) J Med Virol , vol.79 , Issue.7 , pp. 995-1001
    • Araújo, I.T.1    Assis, R.M.2    Fialho, A.M.3    Mascarenhas, J.D.4    Heinemann, M.B.5    Leite, J.P.6
  • 4
    • 44449152130 scopus 로고    scopus 로고
    • Sequence and phylogenetic analysis of the VP4 gene of human rotaviruses isolated in Paraguay
    • Espinola EE, Amarilla A, Arbiza J, Parra GI (2008) Sequence and phylogenetic analysis of the VP4 gene of human rotaviruses isolated in Paraguay. Arch Virol 153(6): 1067-1073.
    • (2008) Arch Virol , vol.153 , Issue.6 , pp. 1067-1073
    • Espinola, E.E.1    Amarilla, A.2    Arbiza, J.3    Parra, G.I.4
  • 5
    • 0024408580 scopus 로고
    • Rotavirus gene structure and function
    • Estes MK, Cohen J (1989) Rotavirus gene structure and function. Microbiol Rev 53: 410-449.
    • (1989) Microbiol Rev , vol.53 , pp. 410-449
    • Estes, M.K.1    Cohen, J.2
  • 6
    • 0001581287 scopus 로고    scopus 로고
    • Rotaviruses and their replication
    • 4th edn., D. M. Knipe, R. M. Howley, D. E. Griffin, R. A. Lamb, M. A. Martin, B. Roizman, and S. E. Straus (Eds.), Philadelphia: Lippincott Williams and Wilkins
    • Estes MK (2001) Rotaviruses and their replication. In: Knipe DM, Howley RM, Griffin DE, Lamb RA, Martin MA, Roizman B, Straus SE (eds) Fields Virology, vol 2, 4th edn. Lippincott Williams and Wilkins, Philadelphia, pp 1747-1785.
    • (2001) Fields Virology , vol.2 , pp. 1747-1785
    • Estes, M.K.1
  • 9
    • 0041522575 scopus 로고    scopus 로고
    • Evidence for genetic linkage between the gene segments encoding NSP4 and VP6 proteins in common and reassortant human rotavirus strains
    • Iturriza-Gomara M, Anderton E, Kang G, Gallimore C, Phillips W, Desselberger U, Gray J (2003) Evidence for genetic linkage between the gene segments encoding NSP4 and VP6 proteins in common and reassortant human rotavirus strains. J Clin Microbiol 41(8): 3566-3573.
    • (2003) J Clin Microbiol , vol.41 , Issue.8 , pp. 3566-3573
    • Iturriza-Gomara, M.1    Anderton, E.2    Kang, G.3    Gallimore, C.4    Phillips, W.5    Desselberger, U.6    Gray, J.7
  • 10
    • 78751634672 scopus 로고    scopus 로고
    • Genotypes of the circulating rotavirus strains in the seven prevaccine seasons from September 2000 to August 2007 in South Korea
    • Jeong HS, Lee KB, Jeong AY, Jo MY, Jung SY, Ahn JH, Jee Y, Kim J, Cheon DS (2010) Genotypes of the circulating rotavirus strains in the seven prevaccine seasons from September 2000 to August 2007 in South Korea. Clin Microbiol Infect 17: 232-235.
    • (2010) Clin Microbiol Infect , vol.17 , pp. 232-235
    • Jeong, H.S.1    Lee, K.B.2    Jeong, A.Y.3    Jo, M.Y.4    Jung, S.Y.5    Ahn, J.H.6    Jee, Y.7    Kim, J.8    Cheon, D.S.9
  • 14
    • 33845399079 scopus 로고    scopus 로고
    • Distribution of human rotavirus G and P types and G9 VP7 sequences circulating in Seoul, Korea
    • Kim HH, Kang S-H, Kim W (2005) Distribution of human rotavirus G and P types and G9 VP7 sequences circulating in Seoul, Korea. J Bacteriol Virol 35(1): 67-74.
    • (2005) J Bacteriol Virol , vol.35 , Issue.1 , pp. 67-74
    • Kim, H.H.1    Kang, S.-H.2    Kim, W.3
  • 15
    • 23944477420 scopus 로고    scopus 로고
    • Epidemiological profile of rotavirus infection in the Republic of Korea: results from prospective surveillance in the Jeongeub District, 1 July 2002 through 30 June 2004
    • Kim JS, Kang JO, Cho SC, Jang YT, Min SA, Park TH, Nyambat B, Jo DS, Gentsch J, Bresee JS, Mast TC, Kilgore PE (2005) Epidemiological profile of rotavirus infection in the Republic of Korea: results from prospective surveillance in the Jeongeub District, 1 July 2002 through 30 June 2004. J Infect Dis 192(Suppl 1): S49-S56.
    • (2005) J Infect Dis , vol.192 , Issue.SUPPL. 1
    • Kim, J.S.1    Kang, J.O.2    Cho, S.C.3    Jang, Y.T.4    Min, S.A.5    Park, T.H.6    Nyambat, B.7    Jo, D.S.8    Gentsch, J.9    Bresee, J.S.10    Mast, T.C.11    Kilgore, P.E.12
  • 16
    • 0043025275 scopus 로고    scopus 로고
    • Genetic and antigenic characterization of rotavirus serotype G9 strains isolated in Australia between 1997 and 2001
    • Kirkwood C, Bogdanovic-Sakran N, Palombo E, Masendycz P, Bugg H, Barnes G, Bishop R (2003) Genetic and antigenic characterization of rotavirus serotype G9 strains isolated in Australia between 1997 and 2001. J Clin Microbiol 41: 3649-3654.
    • (2003) J Clin Microbiol , vol.41 , pp. 3649-3654
    • Kirkwood, C.1    Bogdanovic-Sakran, N.2    Palombo, E.3    Masendycz, P.4    Bugg, H.5    Barnes, G.6    Bishop, R.7
  • 17
    • 0030818601 scopus 로고    scopus 로고
    • Genetic characterization of the rotavirus nonstructural protein, NSP4
    • Kirkwood CD, Palombo E (1997) Genetic characterization of the rotavirus nonstructural protein, NSP4. Virology 236(2): 258-265.
    • (1997) Virology , vol.236 , Issue.2 , pp. 258-265
    • Kirkwood, C.D.1    Palombo, E.2
  • 19
    • 77950982821 scopus 로고    scopus 로고
    • Genetic variation of prevalent G1P[8] human rotaviruses in South Korea
    • Le VP, Chung YC, Kim K, Chung SI, Lim I, Kim W (2010) Genetic variation of prevalent G1P[8] human rotaviruses in South Korea. J Med Virol 82(5): 886-896.
    • (2010) J Med Virol , vol.82 , Issue.5 , pp. 886-896
    • Le, V.P.1    Chung, Y.C.2    Kim, K.3    Chung, S.I.4    Lim, I.5    Kim, W.6
  • 20
    • 79952251134 scopus 로고    scopus 로고
    • Molecular characterization of rare G12P[6] rotavirus isolates closely related to G12 strains from the United States, CAU 195 and CAU 214
    • Le VP, Kim JB, Shon DH, Chung IS, Yoon Y, Kim K, Chung SI, Lim I, Kim W (2011) Molecular characterization of rare G12P[6] rotavirus isolates closely related to G12 strains from the United States, CAU 195 and CAU 214. Arch Virol 156(3): 511-516.
    • (2011) Arch Virol , vol.156 , Issue.3 , pp. 511-516
    • Le, V.P.1    Kim, J.B.2    Shon, D.H.3    Chung, I.S.4    Yoon, Y.5    Kim, K.6    Chung, S.I.7    Lim, I.8    Kim, W.9
  • 22
    • 0025850703 scopus 로고
    • Rotavirus YM gene 4: analysis of its deduced amino acid sequence and prediction of the secondary structure of the VP4 protein
    • Lopez S, Lopez I, Romero P, Mendez E, Soberon X, Arias CF (1991) Rotavirus YM gene 4: analysis of its deduced amino acid sequence and prediction of the secondary structure of the VP4 protein. J Virol 65: 3738-3745.
    • (1991) J Virol , vol.65 , pp. 3738-3745
    • Lopez, S.1    Lopez, I.2    Romero, P.3    Mendez, E.4    Soberon, X.5    Arias, C.F.6
  • 25
    • 34548336548 scopus 로고    scopus 로고
    • Genetic heterogeneity, evolution and recombination in emerging G9 rotaviruses
    • Phan TG, Okitsu S, Maneekarn N, Ushijima H (2007) Genetic heterogeneity, evolution and recombination in emerging G9 rotaviruses. Infect Genet Evol 7: 656-663.
    • (2007) Infect Genet Evol , vol.7 , pp. 656-663
    • Phan, T.G.1    Okitsu, S.2    Maneekarn, N.3    Ushijima, H.4
  • 27
    • 0023375195 scopus 로고
    • The neighbor-joining method: a new method for reconstructing phylogenetic trees
    • Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 28
    • 53849125005 scopus 로고    scopus 로고
    • Increase in prevalence of human group A rotavirus G9 strains as an important VP7 genotype among children in eastern India
    • Samajdar S, Ghosh S, Chawla-Sarkar M, Mitra U, Dutta P, Kobayashi N, Naik TN (2008) Increase in prevalence of human group A rotavirus G9 strains as an important VP7 genotype among children in eastern India. J Clin Virol 43(3): 334-339.
    • (2008) J Clin Virol , vol.43 , Issue.3 , pp. 334-339
    • Samajdar, S.1    Ghosh, S.2    Chawla-Sarkar, M.3    Mitra, U.4    Dutta, P.5    Kobayashi, N.6    Naik, T.N.7
  • 29
    • 11244302672 scopus 로고    scopus 로고
    • Global distribution of rotavirus serotypes/genotypes and its implication for the development and implementation of an effective rotavirus vaccine
    • Santos N, Hoshino Y (2005) Global distribution of rotavirus serotypes/genotypes and its implication for the development and implementation of an effective rotavirus vaccine. Rev Med Virol 15: 29-56.
    • (2005) Rev Med Virol , vol.15 , pp. 29-56
    • Santos, N.1    Hoshino, Y.2
  • 30
    • 33745756537 scopus 로고    scopus 로고
    • Genetic variation of NSP1 and NSP4 genes among serotype G9 rotaviruses causing hospitalization of children in Melbourne, Australia, 1997-2002
    • Shah K, Kirkwood C, Bhave M, Palombo EA (2006) Genetic variation of NSP1 and NSP4 genes among serotype G9 rotaviruses causing hospitalization of children in Melbourne, Australia, 1997-2002. J Med Virol 78(8): 1124-1130.
    • (2006) J Med Virol , vol.78 , Issue.8 , pp. 1124-1130
    • Shah, K.1    Kirkwood, C.2    Bhave, M.3    Palombo, E.A.4
  • 32
    • 70450223142 scopus 로고    scopus 로고
    • National Rotavirus Surveillance in Argentina: high incidence of G9P[8] strains and detection of G4P[6] strains with porcine characteristics
    • Stupka JA, Carvalho P, Amarilla AA, Massana M, Parra GI (2009) National Rotavirus Surveillance in Argentina: high incidence of G9P[8] strains and detection of G4P[6] strains with porcine characteristics. Infect Genet Evol 9(6): 1225-1231.
    • (2009) Infect Genet Evol , vol.9 , Issue.6 , pp. 1225-1231
    • Stupka, J.A.1    Carvalho, P.2    Amarilla, A.A.3    Massana, M.4    Parra, G.I.5
  • 33
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25: 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 34


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.