Characterization of an Abc1 kinase family gene OsABC1-2 conferring enhanced tolerance to dark-induced stress in rice

Gene

Volumn 498, Issue 2, 2012, Pages 155-163

  Gao, Qingsong ^a,b   Yang, Zefeng ^a   Zhou, Yong ^a   Yin, Zhitong ^a   Qiu, Jie ^a   Liang, Guohua ^a   Xu, Chenwu ^a  

^a YANGZHOU UNIVERSITY   (China)

^b HUAIYIN NORMAL UNIVERSITY   (China)

Author keywords

Abc1 kinase; Chloroplast; Dark tolerance; Oryza sativa

Indexed keywords

CHLOROPLAST PROTEIN; PLANT DNA; PROTEIN KINASE; PROTEIN KINASE OSABC1; PROTEIN KINASE OSABC2; SUPEROXIDE DISMUTASE; UNCLASSIFIED DRUG;

ARTICLE; CONTROLLED STUDY; DARK INDUCED STRESS; DARK TOLERANCE; DWARFISM; ENZYME ACTIVITY; GENE INSERTION; GENE MUTATION; GENE OVEREXPRESSION; GENETIC ANALYSIS; GENETIC VARIABILITY; LEAF SENESCENCE; LONG TERM EXPOSURE; MOLECULAR PHYLOGENY; MULTIGENE FAMILY; NONHUMAN; PHENOTYPE; PLANT GENE; PLANT STRESS; PLANT TISSUE; PRIORITY JOURNAL; PROTEIN FAMILY; PROTEIN LOCALIZATION; RICE;

ADAPTATION, PHYSIOLOGICAL; CHLOROPLASTS; DARKNESS; DNA, BACTERIAL; GENE EXPRESSION REGULATION, PLANT; MUTATION; ORYZA SATIVA; PHYLOGENY; PLANT LEAVES; PLANT PROTEINS; PROTEIN KINASES;

ORYZA SATIVA;

EID: 84862803103     PISSN: 03781119     EISSN: 18790038     Source Type: Journal    
DOI: 10.1016/j.gene.2012.02.017     Document Type: Article

References (42)

1. Abe H., Urao T., Ito T., Seki M., Shinozaki K., Yamaguchi-Shinozaki K. Arabidopsis AtMYC2 (bHLH) and AtMYB2 (MYB) function as transcriptional activators in abscisic acid signaling. Plant Cell 2003, 15:63-78.
2. Afzal A.J., Wood A.J., Lightfoot D.A. Plant receptor-like serine threonine kinases: roles in signaling and plant defense. Mol. Plant Microbe Interact. 2008, 21:507-517.
3. Aiyar A. The use of CLUSTAL W and CLUSTAL X for multiple sequence alignment. Meth. Mol. Biol. 2000, 132:221-241.
4. An S., et al. Generation and analysis of end sequence database for T-DNA tagging lines in rice. Plant Physiol. 2003, 133:2040-2047.
5. Araujo W.L., et al. Identification of the 2-hydroxyglutarate and isovaleryl-CoA dehydrogenases as alternative electron donors linking lysine catabolism to the electron transport chain of Arabidopsis mitochondria. Plant Cell 2010, 22:1549-1563.
6. Bart R., Chern M., Park C.J., Bartley L., Ronald P.C. A novel system for gene silencing using siRNAs in rice leaf and stem-derived protoplasts. Plant Meth. 2006, 2:13.
7. Bonnefoy N., Kermorgant M., Brivet-Chevillotte P., Dujardin G. Cloning by functional complementation, and inactivation, of the Schizosaccharomyces pombe homologue of the Saccharomyces cerevisiae gene ABC1. Mol. Gen. Genet. 1996, 251:204-210.
8. Bousquet I., Dujardin G., Slonimski P.P. ABC1, a novel yeast nuclear gene has a dual function in mitochondria: it suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc1 complex. EMBO J. 1991, 10:2023-2031.
9. 1 complex and the neighbouring complexes II and IV in the mitochondrial respiratory chain. Eur. J. Biochem. 1997, 246:103-111.
10. Buchanan-Wollaston V., et al. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005, 42:567-585.
11. Cardazzo B., Hamel P., Sakamoto W., Wintz H., Dujardin G. Isolation of an Arabidopsis thaliana cDNA by complementation of a yeast abc1 deletion mutant deficient in complex III respiratory activity. Gene 1998, 221:117-125.
12. Colcombet J., Hirt H. Arabidopsis MAPKs: a complex signalling network involved in multiple biological processes. Biochem. J. 2008, 413:217-226.
13. Collakova E., DellaPenna D. Isolation and functional analysis of homogentisate phytyltransferase from Synechocystis sp. PCC 6803 and Arabidopsis. Plant Physiol. 2001, 127:1113-1124.
14. Do T.Q., Hsu A.Y., Jonassen T., Lee P.T., Clarke C.F. A defect in coenzyme Q biosynthesis is responsible for the respiratory deficiency in Saccharomyces cerevisiae abc1 mutants. J. Biol. Chem. 2001, 276:18161-18168.
15. Du H., Wang N., Cui F., Li X., Xiao J., Xiong L. Characterization of the beta-carotene hydroxylase gene DSM2 conferring drought and oxidative stress resistance by increasing xanthophylls and abscisic acid synthesis in rice. Plant Physiol. 2010, 154:1304-1318.
16. Gao Q.S., Zhang D., Xu L., Xu C.W. Systematic identification of rice ABC1 gene family and its response to abiotic stress. Rice Sci. 2011, 18:167-177.
17. Guo Y., Cai Z., Gan S. Transcriptome of Arabidopsis leaf senescence. Plant Cell Environ. 2004, 27:521-549.
18. Hiei Y., Ohta S., Komari T., Kumashiro T. Efficient transformation of rice (Oryza sativa L.) mediated by Agrobacterium and sequence analysis of the boundaries of the T-DNA. Plant J 1994, 6:271-282.
19. Hirayama T., Shinozaki K. Research on plant abiotic stress responses in the post-genome era: past, present and future. Plant J. 2010, 61:1041-1052.
20. TRP gene mediates the suppression of cbs2-223 previously attributed to ABC1/COQ8. Biochem. Biophys. Res. Commun. 2004, 317:648-653.
21. Jefferson R.A., Kavanagh T.A., Bevan M.W. GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J. 1987, 6:3901-3907.
22. Jeon J.S., et al. T-DNA insertional mutagenesis for functional genomics in rice. Plant J. 2000, 22:561-570.
23. Jeong D.H., et al. Generation of a flanking sequence-tag database for activation-tagging lines in japonica rice. Plant J. 2006, 45:123-132.
24. Kooten O., Snel J.F.H. The use of chlorophyll fluorescence nomenclature in plant stress physiology. Photosynth. Res. 1990, 25:147-150.
25. Leonard C.J., Aravind L., Koonin E.V. Novel families of putative protein kinases in bacteria and archaea: evolution of the "eukaryotic" protein kinase superfamily. Genome Res. 1998, 8:1038-1047.
26. Lin J.F., Wu S.H. Molecular events in senescing Arabidopsis leaves. Plant J. 2004, 39:612-628.
27. Ma S., Bohnert H.J. Integration of Arabidopsis thaliana stress-related transcript profiles, promoter structures, and cell-specific expression. Genome Biol. 2007, 8:R49.
28. Macinga D.R., Cook G.M., Poole R.K., Rather P.N. Identification and characterization of aarF, a locus required for production of ubiquinone in Providencia stuartii and Escherichia coli and for expression of 2'-N-acetyltransferase in P. stuartii. J. Bacteriol. 1998, 180:128-135.
29. Mollet J., et al. CABC1 gene mutations cause ubiquinone deficiency with cerebellar ataxia and seizures. Am. J. Hum. Genet. 2008, 82:623-630.
30. Motohashi R., et al. Functional analysis of the 37 kDa inner envelope membrane polypeptide in chloroplast biogenesis using a Ds-tagged Arabidopsis pale-green mutant. Plant J. 2003, 34:719-731.
31. Murray M.G., Thompson W.F. Rapid isolation of high molecular weight plant DNA. Nucleic Acids Res. 1980, 8:4321-4325.
32. Park H.C., et al. Pathogen- and NaCl-induced expression of the SCaM-4 promoter is mediated in part by a GT-1 box that interacts with a GT-1-like transcription factor. Plant Physiol. 2004, 135:2150-2161.
33. Perez-Ruiz J.M., Spinola M.C., Kirchsteiger K., Moreno J., Sahrawy M., Cejudo F.J. Rice NTRC is a high-efficiency redox system for chloroplast protection against oxidative damage. Plant Cell 2006, 18:2356-2368.
34. Porra R.J., Thompson W.A., Kriedemann P.E. Determination of accurate extinction coefficients and simultaneous equations for assaying chlorophylls a and b extracted with four different solvents: verification of the concentration of chlorophyll standards by atomic absorption spectroscopy. Biochim. Biophys. Acta (BBA) - Bioenerg. 1989, 975:384-394.
35. Soll J., Douce R., Schultz G. Site of biosynthesis of α-tocopherol in spinach chloroplasts. FEBS Lett. 1980, 112:243-246.
36. Tauche A., Krause-Buchholz U., Rodel G. Ubiquinone biosynthesis in Saccharomyces cerevisiae: the molecular organization of O-methylase Coq3p depends on Abc1p/Coq8p. FEMS Yeast Res. 2008, 8:1263-1275.
37. Uauy C., Distelfeld A., Fahima T., Blechl A., Dubcovsky J. A NAC gene regulating senescence improves grain protein, zinc, and iron content in wheat. Science 2006, 314:1298-1301.
38. van der Graaff E., Schwacke R., Schneider A., Desimone M., Flugge U.I., Kunze R. Transcription analysis of Arabidopsis membrane transporters and hormone pathways during developmental and induced leaf senescence. Plant Physiol. 2006, 141:776-792.
39. 1 complex protein kinase family from common wheat, confers enhanced tolerance to abiotic stresses in Arabidopsis. J. Exp. Bot. 2011, 62:1299-1311.
40. Xiong L., Schumaker K.S., Zhu J.K. Cell signaling during cold, drought, and salt stress. Plant Cell 2002, 14:S165-S183. Suppl.
41. Ytterberg A.J., Peltier J.B., van Wijk K.J. Protein profiling of plastoglobules in chloroplasts and chromoplasts. A surprising site for differential accumulation of metabolic enzymes. Plant Physiol. 2006, 140:984-997.
42. Zhu J.K. Cell signaling under salt, water, and cold stresses. Curr. Opin. Plant Biol. 2001, 4:401-406.