Molecular characterization of DSC1 orthologs in invertebrate species

Insect Biochemistry and Molecular Biology

Volumn 42, Issue 5, 2012, Pages 353-359

  Cui, Ying Jun ^a   Yu, Lin Lin ^a   Xu, Hai Jun ^a   Dong, Ke ^b   Zhang, Chuan Xi ^a  

^a ZHEJIANG UNIVERSITY   (China)

^b MICHIGAN STATE UNIVERSITY   (United States)

Author keywords

Bombyx mori; BSC1; Calcium channel; DSC1 family; Nilaparvata lugens; Sodium channel; Voltage gated cation channel

Indexed keywords

ION CHANNEL;

ALTERNATIVE RNA SPLICING; AMINO ACID SEQUENCE; ANIMAL; ARTICLE; COMPARATIVE STUDY; GENE; GENE EXPRESSION; GENETICS; HEMIPTERA; METABOLISM; MOLECULAR GENETICS; MULTIGENE FAMILY; PHYLOGENY; SILKWORM;

ALTERNATIVE SPLICING; AMINO ACID SEQUENCE; ANIMALS; BOMBYX; GENE EXPRESSION; GENES, INSECT; HEMIPTERA; ION CHANNELS; MOLECULAR SEQUENCE DATA; MULTIGENE FAMILY; PHYLOGENY;

ANNELIDA; ARACHNIDA; BOMBYX MORI; CNIDARIA; ECHINODERMATA; HEMICHORDATA; HEXAPODA; INVERTEBRATA; IXODES SCAPULARIS; MOLLUSCA; NILAPARVATA LUGENS; RHIPICEPHALUS; TETRANYCHUS URTICAE; VARROA; VARROA DESTRUCTOR; VERTEBRATA;

EID: 84862802597     PISSN: 09651748     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ibmb.2012.01.005     Document Type: Article

References (34)

1. Blencowe B.J. Alternative splicing: new insights from global analyses. Cell 2006, 126:37-47.
2. Castella C., Amichot M., Berge J.B., Pauron D. DSC1 channels are expressed in both the central and the peripheral nervous system of adult Drosophila melanogaster. Invert. Neurosci. 2001, 4:85-94.
3. Catterall W.A. Neurotoxins that act on voltage-sensitive sodium-channels in excitable-membranes. Annu. Rev. Pharmacol. 1980, 20:15-43.
4. Catterall W.A. From ionic currents to molecular mechanisms: the structure and function of voltage-gated sodium channels. Neuron 2000, 26:13-25.
5. Cooper J., Dobson H. The benefits of pesticides to mankind and the environment. Crop Prot. 2007, 26:1337-1348.
6. Denholm I., Devine G.J., Williamson M.S. Evolutionary genetics - insecticide resistance on the move. Science 2002, 297:2222-2223.
7. Dong K. Insect sodium channels and insecticide resistance. Invert. Neurosci. 2007, 7:17-30.
8. Feng G.P., Deak P., Chopra M., Hall L.M. Cloning and functional-analysis of TipE, a novel membrane-protein that enhances Drosophila para sodium-channel function. Cell 1995, 82:1001-1011.
9. Hong C.S., Ganetzky B. Spatial and temporal expression patterns of two sodium channel genes in Drosophila. J. Neurosci. 1994, 14:5160-5169.
10. Hoopengardner B., Bhalla T., Staber C., Reenan R. Nervous system targets of RNA editing identified by comparative genomics. Science 2003, 301:832-836.
11. 2+ channels. J. Exp. Biol. 2000, 203:841-856.
12. Kristensen N.P. Phylogeny of insect orders. Annu. Rev. Entomol. 1981, 26:135-157.
13. Kulkarni N.H., Yamamoto A.H., Robinson K.O., Mackay T.F.C., Anholt R.R.H. The DSC1 channel, encoded by the smi60E locus, contributes to odor-guided behavior in Drosophila melanogaster. Genetics 2002, 161:1507-1516.
14. Lee S.H., Ingles P.J., Knipple D.C., Soderlund D.M. Developmental regulation of alternative exon usage in the house fly Vssc1 sodium channel gene. Invert. Neurosci. 2002, 4:125-133.
15. Littleton J.T., Ganetzky B. Ion channels and synaptic organization: analysis of the Drosophila genome. Neuron 2000, 26:35-43.
16. Liu Z., Chung I., Dong K. Alternative splicing of the BSC1 gene generates tissue-specific isoforms in the German cockroach. Insect Biochem. Mol. Biol. 2001, 31:703-713.
17. Loughney K., Kreber R., Ganetzky B. Molecular analysis of the para locus, a sodium channel gene in Drosophila. Cell 1989, 58:1143-1154.
18. Pfaffl M.W. A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res. 2001, 29.
19. Reenan R., Hoopengardner B., Bhalla T., Staber C. Nervous system targets of RNA editing identified by comparative genomics. Science 2003, 301:832-836.
20. Salkoff L., Butler A., Wei A., Scavarda N., Giffen K., Ifune C., Goodman R., Mandel G. Genomic organization and deduced amino acid sequence of a putative sodium channel gene in Drosophila. Science 1987, 237:744-749.
21. Song W., Liu Z., Tan J., Nomura Y., Dong K. RNA editing generates tissue-specific sodium channels with distinct gating properties. J. Biol. Chem. 2004, 279:32554-32561.
22. Tan J., Liu Z., Nomura Y., Goldin A.L., Dong K. Alternative splicing of an insect sodium channel gene generates pharmacologically distinct sodium channels. J. Neurosci. 2002, 22:5300-5309.
23. Thacker J.R.M. An Introduction to Arthropod Pest Control 2002, Cambridge University Press, New York.
24. Thackeray J.R., Ganetzky B. Developmentally regulated alternative splicing generates a complex array of Drosophila para sodium channel isoforms. J. Neurosci. 1994, 14:2569-2578.
25. Thackeray J.R., Ganetzky B. Conserved alternative splicing patterns and splicing signals in the Drosophila sodium channel gene para. Genetics 1995, 141:203-214.
26. Thompson J.D., Higgins D.G., Gibson T.J. Clustal-W - improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 1994, 22:4673-4680.
27. Warmke J.W., Reenan R.A.G., Wang P.Y., Qian S., Arena J.P., Wang J.X., Wunderler D., Liu K., Kaczorowski G.J., VanderPloeg L.H.T., Ganetzky B., Cohen C.J. Functional expression of Drosophila para sodium channels - modulation by the membrane protein TipE and toxin pharmacology. J. Gen. Physiol. 1997, 110:119-133.
28. Wheelan S.J., Church D.M., Ostell J.M. Spidey: a tool for mRNA-to-genomic alignments. Genome Res. 2001, 11:1952-1957.
29. Whiting M.F. Phylogeny of the holometabolous insect orders: molecular evidence. Zool. Scr. 2002, 31:3-15.
30. Xia Q.Y., Wang J., Zhou Z.Y., Li R.Q., Fan W., Cheng D.J., Cheng T.C., Qin J.J., Duan J., Xu H.F., Li Q.B., Li N., Wang M.W., Dai F.Y., Liu C., Lin Y., Zhao P., Zhang H.J., Liu S.P., Zha X.F., Li C.F., Zhao A.C., Pan M.H., Pan G.Q., Shen Y.H., Gao Z.H., Wang Z.L., Wang G.H., Wu Z.L., Hou Y., Chai C.L., Yu Q.Y., He N.J., Zhang Z., Li S.G., Yang H.M., Lu C., Wang J., Xiang Z.H., Mita K., Kasahara M., Nakatani Y., Yamamoto K., Abe H., Ahsan B., Dai-Mon T., Doi K., Fujii T., Fujiwara H., Fujiyama A., Futahashi R., Hashimoto S.I., Ishibashi J., Iwami M., Kadono-Okuda K., Kanamori H., Kataoka H., Katsuma S., Kawaoka S., Kawasaki H., Kohara Y., Kozaki T., Kuroshu R.M., Kuwazaki S., Matsushima K., Minami H., Nagayasu Y., Nakagawa T., Narukawa J., Nohata J., Ohishi K., Ono Y., Osanai-Futahashi M., Ozaki K.H., Qu W., Roller L., Sasaki S., Sasaki T., Seino A., Shimomura M., Shimomura M., Shin-I T., Shinoda T., Shiotsuki T., Suetsugu Y., Sugano S., Suwa M., Suzuki Y., Takiya S.H., Tamura T., Tanaka H., Tanaka Y., Touhara K., Yamada T., Yamakawa M., Yamanaka N., Yoshikawa H., Zhong Y.S., Shima-Da T., Morishita S., Consortium I.S.G. The genome of a lepidopteran model insect, the silkworm Bombyx mori. Insect Biochem. Mol. Biol. 2008, 38:1036-1045.
31. Xue J., Bao Y.Y., Li B.L., Cheng Y.B., Peng Z.Y., Liu H., Xu H.J., Zhu Z.R., Lou Y.G., Cheng J.A., Zhang C.X. Transcriptome analysis of the brown planthopper Nilaparvata lugens. PLoS ONE 2010, 5:e14233.
32. Zhang T., Liu Z., Song W., Du Y., Dong K. Molecular characterization and functional expression of the DSC1 channel. Insect Biochem. Mol. Biol. 2011.
33. Zhou W., Chung I.B., Liu Z.Q., Goldin A.L., Dong K. A voltage-gated calcium-selective channel encoded by a sodium channel-like gene. Neuron 2004, 42:101-112.
34. Zlotkin E. The insect voltage-gated sodium channel as target of insecticides. Annu. Rev. Entomol. 1999, 44:429-455.