Direct microRNA detection with universal tagged probe and time-resolved fluorescence technology

Biosensors and Bioelectronics

Volumn 34, Issue 1, 2012, Pages 291-295

  Jiang, Li ^a   Duan, Demin ^a,b   Shen, Ye ^a   Li, Jiong ^a  

^a SUZHOU INSTITUTE OF NANO TECH AND NANO BIONICS   (China)

^b INSTITUTE OF BIOPHYSICS   (China)

Author keywords

Base stacking; Fluorescence; Label free; Magnetic beads; MicroRNA

Indexed keywords

BASE STACKING; CANCER BIOMARKERS; DETECTION METHODS; DISEASE DIAGNOSIS; HIGH SENSITIVITY; LABEL-FREE; MAGNETIC BEADS; MICRORNAS; SINGLE NUCLEOTIDES; TIME-RESOLVED FLUORESCENCE;

FLUORESCENCE; RNA;

DIAGNOSIS;

MICRORNA; NUCLEOTIDE;

ARTICLE; BASE STACKING HYBRIDIZATION; CONTROLLED STUDY; FLUORESCENCE ANALYSIS; GENE TARGETING; HYBRIDIZATION; LABORATORY DEVICE; MAGNETIC BEAD; MICROARRAY ANALYSIS; MOLECULAR PROBE; RNA ANALYSIS; RNA HYBRIDIZATION; SENSITIVITY AND SPECIFICITY; SIGNAL DETECTION; TIME RESOLVED FLUORESCENCE ANALYSIS; UNIVERSAL TAGGED PROBE;

CELL LINE, TUMOR; DNA; FLUORESCENT DYES; FLUOROIMMUNOASSAY; HUMANS; MICRORNAS; NUCLEIC ACID HYBRIDIZATION; OLIGONUCLEOTIDES; RNA; SENSITIVITY AND SPECIFICITY;

EID: 84862777235     PISSN: 09565663     EISSN: 18734235     Source Type: Journal    
DOI: 10.1016/j.bios.2012.01.035     Document Type: Article

References (33)

1. Bartel D.P. Cell 2004, 116:281-297.
2. Hwang H.W., Mendell J.T. Br. J. Cancer 2006, 94:776-780.
3. Arenz C. Angew. Chem. Int. Ed. 2006, 45:5048-5050.
4. Lu J., Getz G., Miska E.A., Alvarez-Saavedra E., Lamb J., Peck D., Sweet-Cordero A., Ebet B.L., Mak R.H., Ferrando A.A., Downing J.R., Jacks T., Horvitz H.R., Golub T.R. Nature 2005, 435:834-838.
5. Bartels C.L., Tsongalis G.J. Clin. Chem. 2009, 55:623-631.
6. De Martino I., Visone R., Fedele M., Petrocca F., Palmieri D., Hoyos J.M., Forzati F., Croce C.M., Fusco A. Oncogene 2009, 28:1432-1442.
7. Cissell K.A., Deo S.K. Anal. Bioanal. Chem. 2009, 394:1109-1116.
8. Sprinzl M., Poehlmann C. Anal. Chem. 2010, 82:4434-4440.
9. Paiboonskuwong K., Kato Y. Nucleic Acids Symp. Ser. 2006, 327-328.
10. Kato Y. Nucleic Acids Symp. Ser. 2008, 71-72.
11. Hartig J.S., Grune I., Najafi-Shoushtari S.H., Famulok M. J. Am. Chem. Soc. 2004, 126:722-723.
12. Wanunu M., Dadosh T., Ray V., Jin J.M., McReynolds L., Drndic M. Nat. Nanotechnol. 2010, 5:807-814.
13. Husale S., Persson H.H.J., Sahin O. Nature 2009, 462:1075-1078.
14. Fang S.P., Lee H.J., Wark A.W., Corn R.M. J. Am. Chem. Soc. 2006, 128:14044-14046.
15. Barad O., Meiri E., Avniel A., Aharonov R., Barzilai A., Bentwich I., Einav U., Glad S., Hurban P., Karov Y., Lobenhofer E.K., Sharon E., Shiboleth Y.M., Shtutman M., Bentwich Z., Einat P. Genome Res. 2004, 14:2486-2494.
16. Parinov S., Barsky V., Yershov G., Kirillov E., Timofeev E., Belgovskiy A., Mirzabekov A. Nucleic Acids Res. 1996, 24:2998-3004.
17. Vasiliskov V.A., Prokopenko D.V., Mirzabekov A.D. Nucleic Acids Res. 2001, 29:2303-2313.
18. O'Meara D., Yun Z.B., Sonnerborg A., Lundeberg J. J. Clin. Microbiol. 1998, 36:2454-2459.
19. Soini E., Lovgren T. Crit. Rev. Anal. Chem. 1987, 18:105-154.
20. Evangelista R.A., Pollak A., Allore B., Templeton E.F., Morton R.C., Diamandis E.P. Clin. Biochem. 1988, 21:173-178.
21. Harma H., Soukka T., Lonnberg S., Paukkunen J., Tarkkinen P., Lovgren T. Luminescence 2000, 15:351-355.
22. Hagan A.K., Zuchner T. Anal. Bioanal. Chem. 2011, 400:2847-2864.
23. Reinhart B.J., Slack F.J., Basson M., Pasquinelli A.E., Bettinger J.C., Rougvie A.E., Horvitz H.R., Ruvkun G. Nature 2000, 403:901-906.
24. Pasquinelli A.E., Reinhart B.J., Slack F., Martindale M.Q., Kuroda M.I., Maller B., Hayward D.C., Ball E.E., Degnan B., Muller P., Spring J., Srinivasan A., Fishman M., Finnerty J., Corbo J., Levine M., Leahy P., Davidson E., Ruvkun G. Nature 2000, 408:86-89.
25. Lee Y., Ahn C., Han J.J., Choi H., Kim J., Yim J., Lee J., Provost P., Radmark O., Kim S., Kim V.N. Nature 2003, 425:415-419.
26. Cissell K.A., Shrestha S., Deo S.K. Anal. Chem. 2007, 79:4754-4761.
27. Shingara J., Keiger K., Shelton J., Laosinchai-Wolf W., Powers P., Conrad R., Brown D., Labourier E. RNA 2005, 11:1461-1470.
28. Yin J.Q., Zhao R.C., Morris K.V. Trends Biotechnol. 2008, 26:70-76.
29. Volinia S., Calin G.A., Liu C.G., Ambs S., Cimmino A., Petrocca F., Visone R., Iorio M., Roldo C., Ferracin M., Prueitt R.L., Yanaihara N., Lanza G., Scarpa A., Vecchione A., Negrini M., Harris C.C., Croce C.M. Proc. Natl. Acad. Sci. U.S.A. 2006, 103:2257-2261.
30. Takamizawa J., Konishi H., Yanagisawa K., Tomida S., Osada H., Endoh H., Harano T., Yatabe Y., Nagino M., Nimura Y., Mitsudomi T., Takahashi T. Cancer Res. 2004, 64:3753-3756.
31. Duan D., Zheng K., Shen Y., Cao R., Jiang L., Lu Z., Yan X., Li J. Nucleic Acids Res. 2011, 10.1093/nar/gkr774.
32. Yu B., Yang Z.Y., Li J.J., Minakhina S., Yang M.C., Padgett R.W., Steward R., Chen X.M. Science 2005, 307:932-935.
33. Chapin S.C., Appleyard D.C., Pregibon D.C., Doyle P.S. Angew. Chem. Int. Ed. 2011, 50:2289-2293.