메뉴 건너뛰기




Volumn 50, Issue 7, 2012, Pages 2194-2202

Rapid, high-throughput detection of rifampin resistance and heteroresistance in Mycobacterium tuberculosis by use of sloppy molecular beacon melting temperature coding

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; OLIGONUCLEOTIDE; RIFAMPICIN;

EID: 84862743936     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.00143-12     Document Type: Article
Times cited : (39)

References (37)
  • 1
    • 68249147977 scopus 로고    scopus 로고
    • Comparison of performance of two DNA line probe assays for rapid detection of multidrug-resistant isolates of Mycobacterium tuberculosis
    • Ahmad S, Al-Mutairi NM, Mokaddas E. 2009. Comparison of performance of two DNA line probe assays for rapid detection of multidrug-resistant isolates of Mycobacterium tuberculosis. Indian J. Exp. Biol. 47:454-462.
    • (2009) Indian J. Exp. Biol. , vol.47 , pp. 454-462
    • Ahmad, S.1    Al-Mutairi, N.M.2    Mokaddas, E.3
  • 2
    • 77949349592 scopus 로고    scopus 로고
    • Rapid screening of MDR-TB using molecular Line Probe Assay is feasible in Uganda
    • Albert H, et al. 2010. Rapid screening of MDR-TB using molecular Line Probe Assay is feasible in Uganda. BMC Infect. Dis. 10:41.
    • (2010) BMC Infect. Dis. , vol.10 , pp. 41
    • Albert, H.1
  • 3
    • 18544387632 scopus 로고    scopus 로고
    • Comparison of six methods of extracting Mycobacterium tuberculosis DNA from processed sputum for testing by quantitative real-time PCR
    • Aldous WK, Pounder JI, Cloud JL, Woods GL. 2005. Comparison of six methods of extracting Mycobacterium tuberculosis DNA from processed sputum for testing by quantitative real-time PCR. J. Clin. Microbiol. 43:2471-2473.
    • (2005) J. Clin. Microbiol. , vol.43 , pp. 2471-2473
    • Aldous, W.K.1    Pounder, J.I.2    Cloud, J.L.3    Woods, G.L.4
  • 4
    • 79955571240 scopus 로고    scopus 로고
    • Feasibility, diagnostic accuracy, and effectiveness of decentralised use of the Xpert MTB/RIF test for diagnosis of tuberculosis and multidrug resistance: A multicentre implementation study
    • Boehme CC, et al. 2011. Feasibility, diagnostic accuracy, and effectiveness of decentralised use of the Xpert MTB/RIF test for diagnosis of tuberculosis and multidrug resistance: a multicentre implementation study. Lancet 377:1495-1505.
    • (2011) Lancet , vol.377 , pp. 1495-1505
    • Boehme, C.C.1
  • 5
    • 33750686542 scopus 로고    scopus 로고
    • Performance of the genotype MTBDR line probe assay for detection of resistance to rifampin and isoniazid in strains of Mycobacterium tuberculosis with low- And high-level resistance
    • Brossier F, Veziris N, Truffot-Pernot C, Jarlier V, Sougakoff W. 2006. Performance of the genotype MTBDR line probe assay for detection of resistance to rifampin and isoniazid in strains of Mycobacterium tuberculosis with low- and high-level resistance. J. Clin. Microbiol. 44:3659-3664.
    • (2006) J. Clin. Microbiol. , vol.44 , pp. 3659-3664
    • Brossier, F.1    Veziris, N.2    Truffot-Pernot, C.3    Jarlier, V.4    Sougakoff, W.5
  • 6
    • 67649224742 scopus 로고    scopus 로고
    • Direct susceptibility testing for multi drug resistant tuberculosis: A meta-analysis
    • Bwanga F, Hoffner S, Haile M, Joloba ML. 2009. Direct susceptibility testing for multi drug resistant tuberculosis: a meta-analysis. BMC Infect. Dis. 9:67.
    • (2009) BMC Infect. Dis. , vol.9 , pp. 67
    • Bwanga, F.1    Hoffner, S.2    Haile, M.3    Joloba, M.L.4
  • 7
    • 73949134588 scopus 로고    scopus 로고
    • Rapid universal identification of bacterial pathogens from clinical cultures by using a novel sloppy molecular beacon melting temperature signature technique
    • Chakravorty S, et al. 2010. Rapid universal identification of bacterial pathogens from clinical cultures by using a novel sloppy molecular beacon melting temperature signature technique. J. Clin. Microbiol. 48:258-267.
    • (2010) J. Clin. Microbiol. , vol.48 , pp. 258-267
    • Chakravorty, S.1
  • 8
    • 79952338421 scopus 로고    scopus 로고
    • Rapid detection of fluoroquinolone-resistant and heteroresistant Mycobacterium tuberculosis by use of sloppy molecular beacons and dual melting-temperature codes in a real-time PCR assay
    • Chakravorty S, et al. 2011. Rapid detection of fluoroquinolone-resistant and heteroresistant Mycobacterium tuberculosis by use of sloppy molecular beacons and dual melting-temperature codes in a real-time PCR assay. J. Clin. Microbiol. 49:932-940.
    • (2011) J. Clin. Microbiol. , vol.49 , pp. 932-940
    • Chakravorty, S.1
  • 9
    • 80053483572 scopus 로고    scopus 로고
    • Rapid detection of isoniazid, rifampin, and ofloxacin resistance in Mycobacterium tuberculosis clinical isolates using high-resolution melting analysis
    • Chen X, et al. 2011. Rapid detection of isoniazid, rifampin, and ofloxacin resistance in Mycobacterium tuberculosis clinical isolates using high-resolution melting analysis. J. Clin. Microbiol. 49:3450-3457.
    • (2011) J. Clin. Microbiol. , vol.49 , pp. 3450-3457
    • Chen, X.1
  • 10
    • 78049522369 scopus 로고    scopus 로고
    • High-resolution melting curve analysis for rapid detection of rifampin and isoniazid resistance in Mycobacterium tuberculosis clinical isolates
    • Choi GE, et al. 2010. High-resolution melting curve analysis for rapid detection of rifampin and isoniazid resistance in Mycobacterium tuberculosis clinical isolates. J. Clin. Microbiol. 48:3893-3898.
    • (2010) J. Clin. Microbiol. , vol.48 , pp. 3893-3898
    • Choi, G.E.1
  • 11
    • 79960960006 scopus 로고    scopus 로고
    • Suitability of Xpert MTB/RIF and genotype MTBDRplus for patient selection for a tuberculosis clinical trial
    • Friedrich SO, et al. 2011. Suitability of Xpert MTB/RIF and genotype MTBDRplus for patient selection for a tuberculosis clinical trial. J. Clin. Microbiol. 49:2827-2831.
    • (2011) J. Clin. Microbiol. , vol.49 , pp. 2827-2831
    • Friedrich, S.O.1
  • 12
    • 80053482197 scopus 로고    scopus 로고
    • Pyrosequencing for rapid molecular detection of rifampin and isoniazid resistance in Mycobacterium tuberculosis strains and clinical specimens
    • Garcia-Sierra N, et al. 2011. Pyrosequencing for rapid molecular detection of rifampin and isoniazid resistance in Mycobacterium tuberculosis strains and clinical specimens. J. Clin. Microbiol. 49:3683-3686.
    • (2011) J. Clin. Microbiol. , vol.49 , pp. 3683-3686
    • Garcia-Sierra, N.1
  • 13
    • 0036192549 scopus 로고    scopus 로고
    • New real-time PCR able to detect in a single tube multiple rifampin resistance mutations and high-level isoniazid resistance mutations in Mycobacterium tuberculosis
    • Garcia de Viedma D, et al. 2002. New real-time PCR able to detect in a single tube multiple rifampin resistance mutations and high-level isoniazid resistance mutations in Mycobacterium tuberculosis. J. Clin. Microbiol. 40:988-995.
    • (2002) J. Clin. Microbiol. , vol.40 , pp. 988-995
    • Garcia De Viedma, D.1
  • 14
    • 73949120420 scopus 로고    scopus 로고
    • Rapid detection of Mycobacterium tuberculosis and rifampin resistance by use of on-demand, near-patient technology
    • Helb D, et al. 2010. Rapid detection of Mycobacterium tuberculosis and rifampin resistance by use of on-demand, near-patient technology. J. Clin. Microbiol. 48:229-237.
    • (2010) J. Clin. Microbiol. , vol.48 , pp. 229-237
    • Helb, D.1
  • 15
    • 34548059785 scopus 로고    scopus 로고
    • Evaluation of the Geno-Type MTBDRplus assay for rifampin and isoniazid susceptibility testing of Mycobacterium tuberculosis strains and clinical specimens
    • Hillemann D, Rusch-Gerdes S, Richter E. 2007. Evaluation of the Geno-Type MTBDRplus assay for rifampin and isoniazid susceptibility testing of Mycobacterium tuberculosis strains and clinical specimens. J. Clin. Microbiol. 45:2635-2640.
    • (2007) J. Clin. Microbiol. , vol.45 , pp. 2635-2640
    • Hillemann, D.1    Rusch-Gerdes, S.2    Richter, E.3
  • 17
    • 59649089179 scopus 로고    scopus 로고
    • Mechanisms of heteroresistance to isoniazid and rifampin of Mycobacterium tuberculosis in Tashkent, Uzbekistan
    • Hofmann-Thiel S, et al. 2009. Mechanisms of heteroresistance to isoniazid and rifampin of Mycobacterium tuberculosis in Tashkent, Uzbekistan. Eur. Respir. J. 33:368-374.
    • (2009) Eur. Respir. J. , vol.33 , pp. 368-374
    • Hofmann-Thiel, S.1
  • 18
    • 79955738388 scopus 로고    scopus 로고
    • Multiplex fluorescence melting curve analysis for mutation detection with dual-labeled, self-quenched probes
    • doi:10.1371/journal.pone.0019206
    • Huang Q, et al. 2011. Multiplex fluorescence melting curve analysis for mutation detection with dual-labeled, self-quenched probes. PLoS One 6:e19206. doi:10.1371/journal.pone.0019206.
    • (2011) PLoS One , vol.6
    • Huang, Q.1
  • 19
    • 77955435103 scopus 로고    scopus 로고
    • Evaluation of the MTBDRsl test for detection of second-line-drug resistance in Mycobacterium tuberculosis
    • Kiet VS, et al. 2010. Evaluation of the MTBDRsl test for detection of second-line-drug resistance in Mycobacterium tuberculosis. J. Clin. Microbiol. 48:2934-2939.
    • (2010) J. Clin. Microbiol. , vol.48 , pp. 2934-2939
    • Kiet, V.S.1
  • 20
    • 30744446268 scopus 로고    scopus 로고
    • Rapid determination of rifampin resistance in clinical isolates of Mycobacterium tuberculosis by real-time PCR
    • Kocagoz T, Saribas Z, Alp A. 2005. Rapid determination of rifampin resistance in clinical isolates of Mycobacterium tuberculosis by real-time PCR. J. Clin. Microbiol. 43:6015-6019.
    • (2005) J. Clin. Microbiol. , vol.43 , pp. 6015-6019
    • Kocagoz, T.1    Saribas, Z.2    Alp, A.3
  • 21
    • 55849120462 scopus 로고    scopus 로고
    • GenoType MTBDRplus assay for molecular detection of rifampin and isoniazid resistance in Mycobacterium tuberculosis strains and clinical samples
    • Lacoma A, et al. 2008. GenoType MTBDRplus assay for molecular detection of rifampin and isoniazid resistance in Mycobacterium tuberculosis strains and clinical samples. J. Clin. Microbiol. 46:3660-3667.
    • (2008) J. Clin. Microbiol. , vol.46 , pp. 3660-3667
    • Lacoma, A.1
  • 22
    • 79959832194 scopus 로고    scopus 로고
    • Rapid and simultaneous detection of Mycobacterium tuberculosis complex and Beijing/W genotype in sputum by an optimized DNA extraction protocol and a novel multiplex real-time PCR
    • Leung ET, et al. 2011. Rapid and simultaneous detection of Mycobacterium tuberculosis complex and Beijing/W genotype in sputum by an optimized DNA extraction protocol and a novel multiplex real-time PCR. J. Clin. Microbiol. 49:2509-2515.
    • (2011) J. Clin. Microbiol. , vol.49 , pp. 2509-2515
    • Leung, E.T.1
  • 23
    • 48749127726 scopus 로고    scopus 로고
    • GenoType MTBDR assays for the diagnosis of multidrug-resistant tuberculosis: A meta-analysis
    • Ling DI, Zwerling AA, Pai M. 2008. GenoType MTBDR assays for the diagnosis of multidrug-resistant tuberculosis: a meta-analysis. Eur. Respir. J. 32:1165-1174.
    • (2008) Eur. Respir. J. , vol.32 , pp. 1165-1174
    • Ling, D.I.1    Zwerling, A.A.2    Pai, M.3
  • 24
    • 80052218958 scopus 로고    scopus 로고
    • Multiplex real-time PCR melting curve assay to detect drug-resistant mutations of Mycobacterium tuberculosis
    • Luo T, et al. 2011. Multiplex real-time PCR melting curve assay to detect drug-resistant mutations of Mycobacterium tuberculosis. J. Clin. Microbiol. 49:3132-3138.
    • (2011) J. Clin. Microbiol. , vol.49 , pp. 3132-3138
    • Luo, T.1
  • 25
    • 7244232723 scopus 로고    scopus 로고
    • Rapid direct detection of multiple rifampin and isoniazid resistance mutations in Mycobacterium tuberculosis in respiratory samples by real-time PCR
    • Marin M, Garcia de Viedma D, Ruiz-Serrano MJ, Bouza E. 2004. Rapid direct detection of multiple rifampin and isoniazid resistance mutations in Mycobacterium tuberculosis in respiratory samples by real-time PCR. Antimicrob. Agents Chemother. 48:4293-4300.
    • (2004) Antimicrob. Agents Chemother. , vol.48 , pp. 4293-4300
    • Marin, M.1    Garcia De Viedma, D.2    Ruiz-Serrano, M.J.3    Bouza, E.4
  • 26
    • 77950494237 scopus 로고    scopus 로고
    • Rapid detection of rifampicin- And isoniazid-resistant Mycobacterium tuberculosis by high-resolution melting analysis
    • Ong DC, Yam WC, Siu GK, Lee AS. 2010. Rapid detection of rifampicin- and isoniazid-resistant Mycobacterium tuberculosis by high-resolution melting analysis. J. Clin. Microbiol. 48:1047-1054.
    • (2010) J. Clin. Microbiol. , vol.48 , pp. 1047-1054
    • Ong, D.C.1    Yam, W.C.2    Siu, G.K.3    Lee, A.S.4
  • 27
    • 78049508627 scopus 로고    scopus 로고
    • Rapid detection of multidrug-resistant Mycobacterium tuberculosis by use of real-time PCR and high-resolution melt analysis
    • Ramirez MV, et al. 2010. Rapid detection of multidrug-resistant Mycobacterium tuberculosis by use of real-time PCR and high-resolution melt analysis. J. Clin. Microbiol. 48:4003-4009.
    • (2010) J. Clin. Microbiol. , vol.48 , pp. 4003-4009
    • Ramirez, M.V.1
  • 29
    • 80053947408 scopus 로고    scopus 로고
    • Implementation of the INNO-LiPA Rif. TB(R) line-probe assay in rapid detection of multidrug-resistant tuberculosis in Latvia
    • Skenders GK, Holtz TH, Riekstina V, Leimane V. 2011. Implementation of the INNO-LiPA Rif. TB(R) line-probe assay in rapid detection of multidrug-resistant tuberculosis in Latvia. Int. J. Tuberc. Lung Dis. 15:1546-1552.
    • (2011) Int. J. Tuberc. Lung Dis. , vol.15 , pp. 1546-1552
    • Skenders, G.K.1    Holtz, T.H.2    Riekstina, V.3    Leimane, V.4
  • 30
    • 84555178959 scopus 로고    scopus 로고
    • The beginning of the rpoB gene in addition to the RRDR might be needed for identifying RIF/Rfb cross resistance in multidrug-resistant Mycobacterium tuberculosis isolates from southern China
    • Tan Y, et al. 2011. The beginning of the rpoB gene in addition to the RRDR might be needed for identifying RIF/Rfb cross resistance in multidrug-resistant Mycobacterium tuberculosis isolates from southern China. J. Clin. Microbiol. 50:81-85.
    • (2011) J. Clin. Microbiol. , vol.50 , pp. 81-85
    • Tan, Y.1
  • 31
    • 70449637668 scopus 로고    scopus 로고
    • Mycobacterium tuberculosis strains with highly discordant rifampin susceptibility test results
    • Van Deun A, et al. 2009. Mycobacterium tuberculosis strains with highly discordant rifampin susceptibility test results. J. Clin. Microbiol. 47:3501-3506.
    • (2009) J. Clin. Microbiol. , vol.47 , pp. 3501-3506
    • Van Deun, A.1
  • 32
    • 81855194346 scopus 로고    scopus 로고
    • A single Xpert MTB/RIF test of sputum for diagnosis of tuberculosis and multidrug resistance shows high sensitivity and specificity and reduces diagnosis and treatment delays
    • Van Rie A. 2011. A single Xpert MTB/RIF test of sputum for diagnosis of tuberculosis and multidrug resistance shows high sensitivity and specificity and reduces diagnosis and treatment delays. Evid. Based Med. 16:174-175.
    • (2011) Evid. Based Med. , vol.16 , pp. 174-175
    • Van Rie, A.1
  • 33
    • 82455205785 scopus 로고    scopus 로고
    • Rapid diagnosis of tuberculosis with the Xpert MTB/RIF assay in high burden countries: A cost-effectiveness analysis
    • doi:10.1371/journal.pmed.1001120
    • Vassall A, et al. 2011. Rapid diagnosis of tuberculosis with the Xpert MTB/RIF assay in high burden countries: a cost-effectiveness analysis. PLoS Med. 8:e1001120. doi:10.1371/journal.pmed.1001120.
    • (2011) PLoS Med. , vol.8
    • Vassall, A.1
  • 34
    • 24744433767 scopus 로고    scopus 로고
    • Direct application of the INNO-LiPA Rif.TB line-probe assay for rapid identification of Mycobacterium tuberculosis complex strains and detection of rifampin resistance in 360 smear-positive respiratory specimens from an area of high incidence of multidrug-resistant tuberculosis
    • Viveiros M, et al. 2005. Direct application of the INNO-LiPA Rif.TB line-probe assay for rapid identification of Mycobacterium tuberculosis complex strains and detection of rifampin resistance in 360 smear-positive respiratory specimens from an area of high incidence of multidrug-resistant tuberculosis. J. Clin. Microbiol. 43:4880-4884.
    • (2005) J. Clin. Microbiol. , vol.43 , pp. 4880-4884
    • Viveiros, M.1
  • 35
    • 0031836444 scopus 로고    scopus 로고
    • Contribution of rpoB mutations to development of rifamycin cross-resistance in Mycobacterium tuberculosis
    • Williams DL, et al. 1998. Contribution of rpoB mutations to development of rifamycin cross-resistance in Mycobacterium tuberculosis. Antimicrob. Agents Chemother. 42:1853-1857.
    • (1998) Antimicrob. Agents Chemother. , vol.42 , pp. 1853-1857
    • Williams, D.L.1
  • 36
    • 84855674293 scopus 로고    scopus 로고
    • Clinical failures associated with rpoB mutations in phenotypically occult multidrug-resistant Mycobacterium tuberculosis
    • Williamson DA, et al. 2011. Clinical failures associated with rpoB mutations in phenotypically occult multidrug-resistant Mycobacterium tuberculosis. Int. J. Tuberc. Lung Dis. 16:216-220.
    • (2011) Int. J. Tuberc. Lung Dis. , vol.16 , pp. 216-220
    • Williamson, D.A.1
  • 37
    • 66149099261 scopus 로고    scopus 로고
    • Epidemiology of antituberculosis drug resistance 2002-07: An updated analysis of the Global Project on Anti-Tuberculosis Drug Resistance Surveillance
    • Wright A, et al. 2009. Epidemiology of antituberculosis drug resistance 2002-07: an updated analysis of the Global Project on Anti-Tuberculosis Drug Resistance Surveillance. Lancet 373:1861-1873.
    • (2009) Lancet , vol.373 , pp. 1861-1873
    • Wright, A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.