Open-set nearest shrunken centroid classification

Communications in Statistics - Theory and Methods

Volumn 41, Issue 4, 2012, Pages 638-652

  Schaalje, G Bruce ^a   Fields, Paul J ^a  

^a BRIGHAM YOUNG UNIVERSITY   (United States)

Author keywords

Authorship attribution; Bayesian analysis; Closed set classification; Facial recognition; Linear discriminant analysis; Microarrays; Posterior prediction; Speaker identification

Indexed keywords

AUTHORSHIP ATTRIBUTION; BAYESIAN ANALYSIS; FACIAL RECOGNITION; LINEAR DISCRIMINANT ANALYSIS; SPEAKER IDENTIFICATION;

BIOASSAY; BIOCHIPS; FACE RECOGNITION; LOUDSPEAKERS; MICROARRAYS;

CLASSIFICATION (OF INFORMATION);

EID: 84862609322     PISSN: 03610926     EISSN: 1532415X     Source Type: Journal    
DOI: 10.1080/03610926.2010.529529     Document Type: Review

References (30)

1. Buja, A., Lang, D. T., Swayne, D. F. (2007). GGobi: Evolving from XGobi into an extensible framework for interactive data visualization. Journal of Computational and Graphical Statistics 43(4):423-444. (Pubitemid 36990914)
2. Cepeda, L. (2007). Semi-Automatic Speaker Forensic Identification. PhD dissertation, Department of Computer Science, North Carolina State University.
3. Dabney, A. R. (2005). Classification of microarrays to nearest centroids. Bioinformatics 21(22):4148-4154. (Pubitemid 41672105)
4. Dabney, A. R., Storey, J. D. (2007). Optimality driven nearest centroid classification from genomic data. PLoS ONE 2(10):e1002.
5. Deng, J., Hu, Q. (2003). Open-set text independent speaker recognition based on set-score pattern classification. ICASSP 11:73-76.
6. Gelman, A., Carlin, J. B., Stern, H. S., Rubin, D. B. (2004). Bayesian Data Analysis. 2nd ed. New York: Chapman & Hall/CRC.
7. Guo, Y., Hastie, T., Tibshirani, R. (2007). Regularized linear discriminant analysis and its application in microarrays. Biostatistics 8(1):86-100. (Pubitemid 44906104)
8. Habtom, W. R., Varghese, R. S., Zhang, Z., Xuan, J., Clarke, R. (2008). Classification algorithms for phenotype prediction in genomics and proteomics. Front. Biosci. 1:691-708. (Pubitemid 351606123)
9. Hilton, J. L. (1990). On verifying worprint studies: Book of Mormon authorship. BYU Studies 30:89-108.
10. Holmes, D. I. (1992). A stylometric analysis of Mormon scriptures and related texts. Journal of the Royal Statistical Society A 155:91-120.
11. Jockers, M. L., Witten, D. M. (2010). A comparative study of machine learning methods for authorship attribution. Literary and Linguistic Computing 25:215-223.
12. Jockers, M. L., Witten, D. M., Criddle, C. S. (2009). Reassessing authorship of the Book of Mormon using delta and nearest shrunken centroid classification. Literary and Linguistic Computing 23:465-491.
13. 2 test for goodness of fit. Annals of Statistics 32:2361-2384.
14. Koppel, M., Schler, J., Argamon, S. (2009). Computational methods in authorship attribution. Journal of the American Society for Information Science and Technology 60(1):9-26.
15. Lee, J. W., Lee, J. B., Park, M., Song, S.H. (2005). An extensive comparison of recent classification tools applied to microarray data. Computational Statistics & Data Analysis 48:869-885.
16. Levner, I. (2005). Feature selection and nearest centroid classification. BMC Bioinformatics 6:68.
17. Mosteller, F., Wallace, D. L. (1964). Applied Bayesian and Classical Inference: The Case of the Federalist Papers. New York: Springer.
18. Noushath, S., Kumar, G. H., Shivakumara, P. (2006). Diagonal Fisher linear discriminant analysis for efficient face recognition. Neurocomputing 69:1711-1716. (Pubitemid 43947831)
19. Pang, H., Tong, T., Zhao, H. (2010). Shrinkage-based diagonal discriminant analysis and its applications in high-dimensional data. Biometrics 65:1021-1029.
20. Real, E. C., Baumann, A. H. (2000). Open set classification using tolerance intervals, Conference Record of the Thirty-Fourth Asilomar Conference on Signals, Systems and Computers 2:1217-1221. (Pubitemid 32425773)
21. SAS Institute. (2004). SAS/IML 9.1 User's Guide. Cary, NC: Author.
22. Singh, D., Febbo, P. G., Ross, K., Jackson, D. G., Manola, J., Ladd, C., Tamayo, P., Renshaw, A. A., D'Amico, A. V., Richie, J. P., Lander, E. S., Loda, M., Kantoff, P. W., Golub, T. R., Sellers, W. R. (2002). Gene expression correlates of clinical prostate cancer behavior. Cancer Cell 1:203-209. (Pubitemid 41039166)
23. Stamatatos, E. (2009). A survey of modern authorship attribution methods. Journal of the American Society for Information Science and Technology 60:538-556.
24. Thomaz, C. E., Gillies, D. F. (2005). A new Fisher-based method applied to face recognition. In: Gagalowicz, A., Philips, W., eds. Computer Analysis of Images and Patterns Berlin: Springer, p. 596-605.
25. Tibshirani, R., Hastie, T., Narasimham, B., Chu, G. (2002). Diagnosis of multiple cancer types by shrunken centroids of gene expression. Proceedings of the National Academy of Science 99:6567-6572. (Pubitemid 34526173)
26. Tibshirani, R., Hastie, T., Narasimham, B., Chu, G. (2003). Class prediction by nearest shrunken centroids, with application to DNA microarrays. Statistical Science 18(1):104-117. (Pubitemid 41461824)
27. van Delft, J. H. M., van Agen, E., van Breda, S. G. J., Herwijnen, M. H., Staal, Y. C. M., Kleinjans, J. C. S. (2005). Comparison of supervised clustering methods to discriminate genotoxic from non-genotoxic carcinogens by gene expression profiling. Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis 575(1-2): 17-33. (Pubitemid 40740228)
28. Wang, S., Zhu, Z. (2007). Improved centroids estimation for the nearest shrunken centroid classifier. Bioinformatics 23:972-979. (Pubitemid 47050584)
29. Wolf, M. B., Park, W. K., Oh, J. C., Blowers, M. K. (2007). Toward open-set textindependent speaker identification in tactical communications. Proc. 2007 IEEE Symposium on Computational Intelligence in Security and Defense Applications 7-14. (Pubitemid 47431331)
30. Zhao, Q., Principe, J. C. (2001). Support vector machines for SAR automatic target recognition. IEEE Transactions on Aerospace and Electronic Systems 37:643-654. (Pubitemid 32693619)