Humin as an electron mediator for microbial reductive dehalogenation

Environmental Science and Technology

Volumn 46, Issue 12, 2012, Pages 6575-6583

  Zhang, Chunfang ^a   Katayama, Arata ^a  

^a NAGOYA UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ANTHRAQUINONE-2 ,6-DISULFONATE; CARBONYL CARBON; CYCLIC VOLTAMMOGRAMS; ELECTRON ACCEPTOR; ELECTRON DONORS; ELECTRON MEDIATOR; EXTRACELLULAR ELECTRON TRANSFER; HUMIC ACID; HUMIC SUBSTANCES; IN-SITU BIOREMEDIATION; PADDY SOILS; REDOX-ACTIVE; REDOX-ACTIVE CENTERS; REDUCTIVE DEHALOGENATION; RELATED COMPOUNDS; SOLID FORMS; SOLID FRACTION;

BIOLOGICAL MATERIALS; BIOREMEDIATION; DECHLORINATION; KETONES; ORGANIC ACIDS; PHENOLS; PHOTODEGRADATION; REDOX REACTIONS;

ELECTRONS;

CARBON; CHEMICAL COMPOUND; HUMIC ACID; HUMIN; HYDROCHLORIC ACID; HYDROGEN PEROXIDE; PENTACHLOROPHENOL; SODIUM HYDROXIDE; SULFONIC ACID DERIVATIVE; UNCLASSIFIED DRUG;

BIOREMEDIATION; ELECTRON; ELECTRON SPIN RESONANCE; FRACTIONATION; HUMIC SUBSTANCE; HYDROCHLORIC ACID; HYDROXIDE; MICROBIAL ACTIVITY; PADDY FIELD; REDOX POTENTIAL; SOIL MICROORGANISM; SOLUBILIZATION;

ARTICLE; BIOREMEDIATION; CYCLIC POTENTIOMETRY; DECHLORINATION; DEHALOGENATION; ELECTRON SPIN RESONANCE; ELECTRON TRANSPORT; FOURIER TRANSFORM INFRARED PHOTOACOUSTIC SPECTROSCOPY; HEATING; HUMIC SUBSTANCE; NUCLEAR MAGNETIC RESONANCE; OXIDATION REDUCTION REACTION; SEDIMENT; SOIL; SOLID;

ELECTROCHEMICAL TECHNIQUES; ELECTRON SPIN RESONANCE SPECTROSCOPY; ELECTRONS; HALOGENS; HUMIC SUBSTANCES; MICROSCOPY, FLUORESCENCE; OXIDATION-REDUCTION; SPECTROSCOPY, FOURIER TRANSFORM INFRARED;

EID: 84862573869     PISSN: 0013936X     EISSN: 15205851     Source Type: Journal    
DOI: 10.1021/es3002025     Document Type: Article

References (43)

1. Stevenson, F. J. Humus Chemistry: Genesis, Composition, Reactions; Wiley: New York, 1994.
2. Lovley, D. R.; Coates, J. D.; Blunt-Harris, E. L.; Phillips, E. J. P.; Woodward, J. C. Humic substances as electron acceptors for microbial respiration. Nature 1996, 382 (6590), 445-448. (Pubitemid 26264859)
3. Lovley, D. R.; Fraga, J. L.; Coates, J. D.; Blunt-Harris, E. L. Humics as an electron donor for anaerobic respiration. Environ. Microbiol. 1999, 1 (1), 89-98. (Pubitemid 129640031)
4. Bradley, P. M.; Chapelle, F. H.; Lovley, D. R. Humic acids as electron acceptors for anaerobic microbial oxidation of vinyl chloride and dichloroethene. Appl. Environ. Microbiol. 1998, 64 (8), 3102-3105. (Pubitemid 28363195)
5. Van der Zee, F. R.; Cervantes, F. J. Impact and application of electron shuttles on the redox (bio)transformation of contaminants: A review. Biotechnol. Adv. 2009, 27 (3), 256-277.
6. Van der Zee, F. P.; Bouwman, R. H. M.; Strik, D.; Lettinga, G.; Field, J. A. Application of redox mediators to accelerate the transformation of reactive azo dyes in anaerobic bioreactors. Biotechnol. Bioeng. 2001, 75 (6), 691-701. (Pubitemid 33115761)
7. Workman, D. J.; Woods, S. L.; Gorby, Y. A.; Fredrickson, J. K.; Truex, M. J. Microbial reduction of vitamin B-12 by Shewanella alga strain BrY with subsequent transformation of carbon tetrachloride. Environ. Sci. Technol. 1997, 31 (8), 2292-2297. (Pubitemid 27343903)
8. Eswaran, H.; Vandenberg, E.; Reich, P. Organic-carbon in soils of the world. Soil Sci. Soc. Am. J. 1993, 57 (1), 192-194.
9. Roden, E. E.; Kappler, A.; Bauer, I.; Jiang, J.; Paul, A.; Stoesser, R.; Konishi, H.; Xu, H. F. Extracellular electron transfer through microbial reduction of solid-phase humic substances. Nat. Geosci. 2010, 3 (6), 417-421.
10. Peper, M.; Ertl, M.; Gerhard, I. Long-term exposure to wood-preserving chemicals containing pentachlorophenol and lindane is related to neurobehavioral performance in women. Am. J. Ind. Med. 1999, 35 (6), 632-641. (Pubitemid 29226970)
11. Agency for Toxic Substances and Disease Registry (ATSDR). Comprehensive Environmental Response, Compensation, and Liability Act (CERCLA) Priority List of Hazardous Substances; 2011.http://www.atsdr.cdc.gov/spl/resources/ATSDR-2011- SPL-Detailed-Data-Table.pdf (accessed May 6, 2012).
12. World Health Organization (WHO). Guidelines for drinking-water quality. 4th ed.; Malta, 2011. http://whqlibdoc.who.int/publications/2011/9789241548151- eng.pdf (accessed May 6, 2012).
13. El Fantroussi, S.; Naveau, H.; Agathos, S. N. Anaerobic dechlorinating bacteria. Biotechnol. Prog. 1998, 14 (2), 167-188. (Pubitemid 28202600)
14. Kim, H. K.; Inoue, Y.; Handa, Y.; Yasuta, T.; Lee, K. S.; Katayama, A. Anaerobic biodegradation of PCP in Japanese paddy soils. Korean J. Environ. Agric. 2004, 23 (3), 138-141.
15. Yang, S.; Shibata, A.; Yoshida, N.; Katayama, A. Anaerobic mineralization of pentachlorophenol (PCP) by combining PCP-dechlorinating and phenol-degrading cultures. Biotechnol. Bioeng. 2009, 102 (1), 81-90.
16. Rice, J. A. Humin. Soil Sci. 2001, 166 (11), 848-857. (Pubitemid 33146197)
17. Hayes, M. H. B.; Clapp, C. E. Humic substances: Considerations of compositions, aspects of structure, and environmental influences. Soil Sci. 2001, 166 (11), 723-737. (Pubitemid 33146190)
18. Simpson, A. J.; Song, G. X.; Smith, E.; Lam, B.; Novotny, E. H.; Hayes, M. H. B. Unraveling the structural components of soil humin by use of solution-state nuclear magnetic resonance spectroscopy. Environ. Sci. Technol. 2007, 41 (3), 876-883. (Pubitemid 46208524)
19. Wen, B.; Zhang, J. J.; Zhang, S. Z.; Shan, X. Q.; Khan, S. U.; Xing, B. S. Phenanthrene sorption to soil humic acid and different humin fractions. Environ. Sci. Technol. 2007, 41 (9), 3165-3171.
20. Borisover, M.; Graber, E. R. Hydration of natural organic matter: Effect on sorption of organic compounds by humin and humic acid fractions vs original peat material. Environ. Sci. Technol. 2004, 38 (15), 4120-4129. (Pubitemid 39014194)
21. Yang, S.; Yoshida, N.; Baba, D.; Katayama, A. Anaerobic biodegradation of biphenyl in various paddy soils and river sediment. Chemosphere 2008, 71 (2), 328-336. (Pubitemid 351258039)
22. 15N CPMAS NMR spectra of bulk soils, particle size fractions and organic material by treatment with 10% hydrofluoric acid. Eur. J. Soil Sci. 1997, 48, 319-328.
23. Schnitzer, M. In Soil Organic Matter; Schnitzer, M., Khan, S. U., Eds.; Elsevier, New York, 1978; pp 3-6.
24. Holliger, C.; Hahn, D.; Harmsen, H.; Ludwig, W.; Schumacher, W.; Tindall, B.; Vazquez, F.; Weiss, N.; Zehnder, A. J. B. Dehalobacter restrictus gen. nov. and sp. nov., a strictly anaerobic bacterium that reductively dechlorinates tetra- and trichloroethene in an anaerobic respiration. Arch. Microbiol. 1998, 169 (4), 313-321. (Pubitemid 28189535)
25. Widdel, F.; Kohring, G. W.; Mayer, F. Studies on dissimilatory sulfate-reducing bacteria that decompose fatty acids. III. Characterization of the filamentous gliding Desulfonema limicola gen. nov. sp. nov. and Desulfonema magnum sp. nov. Arch. Microbiol. 1983, 134 (4), 286-294.
26. Yoshida, N.; Yoshida, Y.; Handa, Y.; Kim, H. K.; Ichihara, S.; Katayama, A. Polyphasic characterization of a PCP-to-phenol dechlorinating microbial community enriched from paddy soil. Sci. Total Environ. 2007, 381 (1-3), 233-242. (Pubitemid 46843169)
27. Li, Y. Fluorescence microscopic observations of microorganisms in soil. MSc Thesis, The Ohio State University, Columbus, OH, 2001.
28. Nurmi, J. T.; Tratnyek, P. G. Electrochemical properties of natural organic matter (NOM), fractions of NOM, and model biogeochemical electron shuttles. Environ. Sci. Technol. 2002, 36 (4), 617-624. (Pubitemid 34157501)
29. Cornell, R. M.; Giovanoli, R. Effect of cobalt on the formation of crystalline iron oxides from ferrihydrite in alkaline media. Clays Clay Miner. 1989, 37 (1), 65-70.
30. Alvarez-Puebla, R. A.; Aroca, R. F.; Valenzuela-Calahorro, C.; Garrido, J. J. Retention of cobalt on a humin derived from brown coal. J. Hazard. Mater. 2006, 135 (1-3), 122-128. (Pubitemid 43776326)
31. Ruckdeschel, G.; Renner, G.; Schwarz, K. Effects of pentachlorophenol and some of its known and possible metabolites on different species of bacteria. Appl. Environ. Microbiol. 1987, 53 (11), 2689-2692. (Pubitemid 18043272)
32. Sawyer, D. T.; Sobkowiak, A.; Roberts, J. L., Jr. Electrochemistry for Chemists, 2nd ed.; Wiley: New York, 1995; p 999.
33. Hubbard, A. T. Electrochemistry at well-characterized surfaces. Chem. Rev. 1988, 88 (4), 633-656.
34. Scott, D. T.; McKnight, D. M.; Blunt-Harris, E. L.; Kolesar, S. E.; Lovley, D. R. Quinone moieties act as electron acceptors in the reduction of humic substances by humics-reducing microorganisms. Environ. Sci. Technol. 1998, 32 (19), 2984-2989. (Pubitemid 28475663)
35. Paul, A.; Stosser, R.; Zehl, A.; Zwirnmann, E.; Vogt, R. D.; Steinberg, C. E. W. Nature and abundance of organic radicals in natural organic matter: Effect of pH and irradiation. Environ. Sci. Technol. 2006, 40 (19), 5897-5903. (Pubitemid 44507240)
36. 3 extraction procedures. J. Plant Nutr. Soil Sc. 2007, 170 (4), 522-529.
37. Norwood, D. L.; Christman, R. F.; Hatcher, P. G. Structural characterization of aquatic humic material. 2. Phenolic content and its relationship to chlorination mechanism in an isolated aquatic fulvic acid. Environ. Sci. Technol. 1987, 21 (8), 791-798.
38. 13C CPMAS NMR of de-ashed soil humin in a second-growth Douglas-fir stand of coastal British Columbia. Geoderma 1995, 68 (4), 229-241.
39. Schroder, U. Anodic electron transfer mechanisms in microbial fuel cells and their energy efficiency. Phys. Chem. Chem. Phys. 2007, 9 (21), 2619-2629.
40. Dolfing, J.; Harrison, B. K. Gibbs free energy of formation of halogenated aromatic compounds and their potential role as electron acceptors in anaerobic environments. Environ. Sci. Technol. 1992, 26 (11), 2213-2218.
41. Coates, J. D.; Cole, K. A.; Chakraborty, R.; O'Connor, S. M.; Achenbach, L. A. Diversity and ubiquity of bacteria capable of utilizing humic substances as electron donors for anaerobic respiration. Appl. Environ. Microbiol. 2002, 68 (5), 2445-2452. (Pubitemid 34477843)
42. Coates, J. D.; Ellis, D. J.; Blunt-Harris, E. L.; Gaw, C. V.; Roden, E. E.; Lovley, D. R. Recovery of humic-reducing bacteria from a diversity of environments. Appl. Environ. Microbiol. 1998, 64 (4), 1504-1509. (Pubitemid 28188419)
43. Lovley, D. R.; Fraga, J. L.; Blunt-Harris, E. L.; Hayes, L. A.; Phillips, E. J. P.; Coates, J. D. Humic substances as a mediator for microbially catalyzed metal reduction. Acta Hydrochim. Hydrobiol. 1998, 26 (3), 152-157. (Pubitemid 29346149)