메뉴 건너뛰기




Volumn 40, Issue D1, 2012, Pages

SubtiWiki - A comprehensive community resource for the model organism Bacillus subtilis

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; TRANSCRIPTION FACTOR;

EID: 84862186268     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkr923     Document Type: Article
Times cited : (70)

References (26)
  • 2
    • 0028935455 scopus 로고
    • SubtiList: A relational database for the Bacillus subtilis genome
    • Moszer,I., Glaser,P. and Danchin,A. (1995) SubtiList: a relational database for the Bacillus subtilis genome. Microbiology, 141, 261-268.
    • (1995) Microbiology , vol.141 , pp. 261-268
    • Moszer, I.1    Glaser, P.2    Danchin, A.3
  • 3
    • 84908087962 scopus 로고    scopus 로고
    • A community-curated consensual annotation that is continuously updated: The Bacillus subtilis centred wiki SubtiWiki
    • doi: 10.1093/database/bap012
    • Flórez,L.A., Roppel,S.F., Schmeisky,A.G., Lammers,C.R. and Stülke,J. (2009) A community-curated consensual annotation that is continuously updated: the Bacillus subtilis centred wiki SubtiWiki. Database, doi: 10.1093/database/bap012.
    • (2009) Database
    • Flórez, L.A.1    Roppel, S.F.2    Schmeisky, A.G.3    Lammers, C.R.4    Stülke, J.5
  • 4
    • 77749280244 scopus 로고    scopus 로고
    • Connecting parts with processes: SubtiWiki and SubtiPathways integrate gene and pathway annotation for Bacillus subtilis
    • Lammers,C.R., Flórez,L.A., Schmeisky,A.G., Roppel,S.F., Mäder,U., Hamoen,L. and Stülke,J. (2010) Connecting parts with processes: SubtiWiki and SubtiPathways integrate gene and pathway annotation for Bacillus subtilis. Microbiology, 156, 849-859.
    • (2010) Microbiology , vol.156 , pp. 849-859
    • Lammers, C.R.1    Flórez, L.A.2    Schmeisky, A.G.3    Roppel, S.F.4    Mäder, U.5    Hamoen, L.6    Stülke, J.7
  • 5
    • 23444439817 scopus 로고    scopus 로고
    • Using process diagrams for the graphical representation of biological networks
    • DOI 10.1038/nbt1111
    • Kitano,H., Funahashi,A., Matsuoka,Y. and Oda,K. (2005) Using process diagrams for the graphical representation of biological networks. Nat. Biotechnol., 23, 961-966. (Pubitemid 41114029)
    • (2005) Nature Biotechnology , vol.23 , Issue.8 , pp. 961-966
    • Kitano, H.1    Funahashi, A.2    Matsuoka, Y.3    Oda, K.4
  • 7
    • 80051569482 scopus 로고    scopus 로고
    • Germination proteins in the inner membrane of dormant Bacillus subtilis spores colocalize in a discrete cluster
    • Griffiths,K.K., Zhang,J., Cowan,A.E., Yu,J. and Setlow,P. (2011) Germination proteins in the inner membrane of dormant Bacillus subtilis spores colocalize in a discrete cluster. Mol. Microbiol., 81, 1061-1077.
    • (2011) Mol. Microbiol. , vol.81 , pp. 1061-1077
    • Griffiths, K.K.1    Zhang, J.2    Cowan, A.E.3    Yu, J.4    Setlow, P.5
  • 9
    • 74749100156 scopus 로고    scopus 로고
    • Reconstitution of the B. subtilis replisome with 13 proteins including two distinct replicases
    • Sanders,G.M., Dallmann,H.G. and McHenry,C.S. (2010) Reconstitution of the B. subtilis replisome with 13 proteins including two distinct replicases. Mol. Cell, 37, 273-281.
    • (2010) Mol. Cell , vol.37 , pp. 273-281
    • Sanders, G.M.1    Dallmann, H.G.2    McHenry, C.S.3
  • 11
    • 78650528801 scopus 로고    scopus 로고
    • Physical interactions between tricarboxylic acid cycle enzymes in Bacillus subtilis: Evidence for a metabolon
    • Meyer,F.M., Gerwig,J., Hammer,E., Herzberg,C., Commichau,F.M., Völker,U. and Stülke,J. (2011) Physical interactions between tricarboxylic acid cycle enzymes in Bacillus subtilis: evidence for a metabolon. Metab. Eng., 13, 18-27.
    • (2011) Metab. Eng. , vol.13 , pp. 18-27
    • Meyer, F.M.1    Gerwig, J.2    Hammer, E.3    Herzberg, C.4    Commichau, F.M.5    Völker, U.6    Stülke, J.7
  • 14
    • 38549162091 scopus 로고    scopus 로고
    • DBTBS: A database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information
    • DOI 10.1093/nar/gkm910
    • Sierro,N., Makita,Y., de Hoon,M. and Nakai,K. (2008) DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic Acids Res., 36, D93-D96. (Pubitemid 351149702)
    • (2008) Nucleic Acids Research , vol.36 , Issue.SUPPL. 1
    • Sierro, N.1    Makita, Y.2    De Hoon, M.3    Nakai, K.4
  • 15
    • 0029955765 scopus 로고    scopus 로고
    • The European Bacillus subtilis genome sequencing project: Current status and accessibility of the data from a new World Wide Web site
    • Moszer,I., Kunst,F. and Danchin,A. (1996) The European Bacillus subtilis genome sequencing project: current status and accessibility of the data from a new World Wide Web site. Microbiology, 142, 2987-2991. (Pubitemid 26418122)
    • (1996) Microbiology , vol.142 , Issue.11 , pp. 2987-2991
    • Moszer, I.1    Kunst, F.2    Danchin, A.3
  • 16
    • 0027133165 scopus 로고
    • Functions of the gene products of Escherichia coli
    • Riley,M. (1993) Functions of the gene products of Escherichia coli. Microbiol. Rev., 57, 862-952.
    • (1993) Microbiol. Rev. , vol.57 , pp. 862-952
    • Riley, M.1
  • 17
    • 33746255580 scopus 로고    scopus 로고
    • Prediction and classification of protein functions
    • DOI 10.1016/j.ddtec.2006.06.011, PII S1740674906000357
    • Ruepp,A. and Mewes,H.W. (2006) Prediction and classification of protein functions. Drug Discov. Today: Technol., 3, 145-151. (Pubitemid 44089444)
    • (2006) Drug Discovery Today: Technologies , vol.3 , Issue.2 , pp. 145-151
    • Ruepp, A.1    Mewes, H.W.2
  • 18
    • 9144257282 scopus 로고    scopus 로고
    • The FunCat, a functional annotation scheme for systematic classification of proteins from whole genomes
    • Ruepp,A. (2004) The FunCat, a functional annotation scheme for systematic classification of proteins from whole genomes. Nucleic Acids Res., 32, 5539-5545.
    • (2004) Nucleic Acids Res. , vol.32 , pp. 5539-5545
    • Ruepp, A.1
  • 19
    • 0034570532 scopus 로고    scopus 로고
    • MultiFun, a multifunctional classification scheme for Escherichia coli K-12 gene products
    • Serres,M.H. and Riley,M. (2000) MultiFun, a multifunctional classification scheme for Escherichia coli K-12 gene products. Microb. Comparative Genomics, 5, 205-222.
    • (2000) Microb. Comparative Genomics , vol.5 , pp. 205-222
    • Serres, M.H.1    Riley, M.2
  • 20
    • 80052929972 scopus 로고    scopus 로고
    • S-bacillithiolation protects against hypochlorite stress in Bacillus subtilis as revealed by transcriptomics and redox proteomics
    • in press
    • Chi,B.K., Gronau,K., Maeder,U., Hessling,B., Bacher,D. and Antelmann,H. (2011) S-bacillithiolation protects against hypochlorite stress in Bacillus subtilis as revealed by transcriptomics and redox proteomics. Mol. Cell. Proteomics (in press).
    • (2011) Mol. Cell. Proteomics
    • Chi, B.K.1    Gronau, K.2    Maeder, U.3    Hessling, B.4    Bacher, D.5    Antelmann, H.6
  • 22
    • 35348934254 scopus 로고    scopus 로고
    • Genome-scale reconstruction of metabolic network in Bacillus subtilis based on high-throughput phenotyping and gene essentiality data
    • DOI 10.1074/jbc.M703759200
    • Oh,Y.K., Palsson,B.O., Park,S.M., Schilling,C.H. and Mahadevan,R. (2007) Genome-scale reconstruction of metabolic network in Bacillus subtilis based on high-throughput phenotyping and gene essentiality data. J. Biol. Chem., 282, 28791-28799. (Pubitemid 47606013)
    • (2007) Journal of Biological Chemistry , vol.282 , Issue.39 , pp. 28791-28799
    • Oh, Y.-K.1    Palsson, B.O.2    Park, S.M.3    Schilling, C.H.4    Mahadevan, R.5
  • 24
    • 67650573077 scopus 로고    scopus 로고
    • IBsu1103: A new genome-scale model of Bacillus subtilis based on SEED annotations
    • Henry,C.S., Zinner,J.F., Cohoon,M.P. and Stevens,R.L. (2009) iBsu1103: a new genome-scale model of Bacillus subtilis based on SEED annotations. Genome Biol., 10, R69.
    • (2009) Genome Biol. , vol.10
    • Henry, C.S.1    Zinner, J.F.2    Cohoon, M.P.3    Stevens, R.L.4
  • 26
    • 78449274157 scopus 로고    scopus 로고
    • CellPublisher: A web platform for the intuitive visualization and sharing of metabolic, signaling and regulatory pathways
    • Flórez,L.A., Lammers,C.R., Michna,R. and Stülke,J. (2010) CellPublisher: a web platform for the intuitive visualization and sharing of metabolic, signaling and regulatory pathways. Bioinformatics, 26, 2997-2999.
    • (2010) Bioinformatics , vol.26 , pp. 2997-2999
    • Flórez, L.A.1    Lammers, C.R.2    Michna, R.3    Stülke, J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.