-
1
-
-
33847076849
-
Chromatin modifications and their function
-
Kouzarides,T. (2007) Chromatin modifications and their function. Cell, 128, 693-705.
-
(2007)
Cell
, vol.128
, pp. 693-705
-
-
Kouzarides, T.1
-
2
-
-
60149103624
-
Epigenetic mechanisms in mammals
-
Kim,J.K., Samaranayake,M. and Pradhan,S. (2009) Epigenetic mechanisms in mammals. Cell. Mol. Life Sci., 66, 596-612.
-
(2009)
Cell. Mol. Life Sci.
, vol.66
, pp. 596-612
-
-
Kim, J.K.1
Samaranayake, M.2
Pradhan, S.3
-
3
-
-
3442890774
-
Epigenetics and human disease
-
DOI 10.1146/annurev.genom.5.061903.180014
-
Jiang,Y.H., Bressler,J. and Beaudet,A.L. (2004) Epigenetics and human disease. Annu. Rev. Genomics Hum. Genet., 5, 479-510. (Pubitemid 39362754)
-
(2004)
Annual Review of Genomics and Human Genetics
, vol.5
, pp. 479-510
-
-
Jiang, Y.-H.1
Bressler, J.2
Beaudet, A.L.3
-
4
-
-
34249275353
-
Phenotypic plasticity and the epigenetics of human disease
-
Feinberg,A.P. (2007) Phenotypic plasticity and the epigenetics of human disease. Nature, 447, 433-440.
-
(2007)
Nature
, vol.447
, pp. 433-440
-
-
Feinberg, A.P.1
-
5
-
-
40849139208
-
Epigenetics in cancer
-
Esteller,M. (2008) Epigenetics in cancer. N. Engl. J. Med., 358, 1148-1159.
-
(2008)
N. Engl. J. Med.
, vol.358
, pp. 1148-1159
-
-
Esteller, M.1
-
6
-
-
34547824239
-
Genome-epigenome interactions in cancer
-
Brena,R.M. and Costello,J.F. (2007) Genome-epigenome interactions in cancer. Hum. Mol. Genet., 16(Spec 1), R96-R105.
-
(2007)
Hum. Mol. Genet.
, vol.16
, Issue.SPEC. 1
-
-
Brena, R.M.1
Costello, J.F.2
-
7
-
-
0347622294
-
Targeting DNA methylation in cancer
-
Szyf,M. (2003) Targeting DNA methylation in cancer. Ageing Res. Rev., 2, 299-328.
-
(2003)
Ageing Res. Rev.
, vol.2
, pp. 299-328
-
-
Szyf, M.1
-
8
-
-
77649192026
-
Detecting novel hypermethylated genes in breast cancer benefiting from feature selection
-
Lv,J., Su,J., Wang,F., Qi,Y., Liu,H. and Zhang,Y. (2010) Detecting novel hypermethylated genes in breast cancer benefiting from feature selection. Comput. Biol. Med., 40, 159-167.
-
(2010)
Comput. Biol. Med.
, vol.40
, pp. 159-167
-
-
Lv, J.1
Su, J.2
Wang, F.3
Qi, Y.4
Liu, H.5
Zhang, Y.6
-
9
-
-
70449725209
-
Epigenetic mechanisms in neurological diseases: Genes, syndromes, and therapies
-
Urdinguio,R.G., Sanchez-Mut,J.V. and Esteller,M. (2009) Epigenetic mechanisms in neurological diseases: genes, syndromes, and therapies. Lancet Neurol., 8, 1056-1072.
-
(2009)
Lancet Neurol.
, vol.8
, pp. 1056-1072
-
-
Urdinguio, R.G.1
Sanchez-Mut, J.V.2
Esteller, M.3
-
10
-
-
25144518262
-
MGMT promoter methylation and field defect in sporadic colorectal cancer
-
DOI 10.1093/jnci/dji275
-
Shen,L., Kondo,Y., Rosner,G.L., Xiao,L., Hernandez,N.S., Vilaythong,J., Houlihan,P.S., Krouse,R.S., Prasad,A.R., Einspahr,J.G. et al. (2005) MGMT promoter methylation and field defect in sporadic colorectal cancer. J. Natl. Cancer Inst., 97, 1330-1338. (Pubitemid 41487800)
-
(2005)
Journal of the National Cancer Institute
, vol.97
, Issue.18
, pp. 1330-1338
-
-
Shen, L.1
Kondo, Y.2
Rosner, G.L.3
Xiao, L.4
Hernandez, N.S.5
Vilaythong, J.6
Houlihan, P.S.7
Krouse, R.S.8
Prasad, A.R.9
Einspahr, J.G.10
Buckmeier, J.11
Alberts, D.S.12
Hamilton, S.R.13
Issa, J.-P.J.14
-
11
-
-
33947315736
-
Cancer epigenomics: DNA methylomes and histone-modification maps
-
Esteller,M. (2007) Cancer epigenomics: DNA methylomes and histone-modification maps. Nat. Rev. Genet., 8, 286-298.
-
(2007)
Nat. Rev. Genet.
, vol.8
, pp. 286-298
-
-
Esteller, M.1
-
12
-
-
0035072804
-
Molecular genetics of Rett syndrome and clinical spectrum of MECP2 mutations
-
DOI 10.1097/00019052-200104000-00006
-
Shahbazian,M.D. and Zoghbi,H.Y. (2001) Molecular genetics of Rett syndrome and clinical spectrum of MECP2 mutations. Curr. Opin. Neurol., 14, 171-176. (Pubitemid 32281269)
-
(2001)
Current Opinion in Neurology
, vol.14
, Issue.2
, pp. 171-176
-
-
Shahbazian, M.D.1
Zoghbi, H.Y.2
-
13
-
-
22844457491
-
DNA methylation and human disease
-
Robertson,K.D. (2005) DNA methylation and human disease. Nat. Rev. Genet., 6, 597-610.
-
(2005)
Nat. Rev. Genet.
, vol.6
, pp. 597-610
-
-
Robertson, K.D.1
-
14
-
-
75049083298
-
Genome-scale approaches to the epigenetics of common human disease
-
Feinberg,A.P. (2010) Genome-scale approaches to the epigenetics of common human disease. Virchows Arch., 456, 13-21.
-
(2010)
Virchows Arch.
, vol.456
, pp. 13-21
-
-
Feinberg, A.P.1
-
15
-
-
0037252736
-
An improved version of the DNA methylation database (MethDB)
-
DOI 10.1093/nar/gkg093
-
Amoreira,C., Hindermann,W. and Grunau,C. (2003) An improved version of the DNA methylation database (MethDB). Nucleic Acids Res., 31, 75-77. (Pubitemid 36150337)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.1
, pp. 75-77
-
-
Amoreira, C.1
Hindermann, W.2
Grunau, C.3
-
16
-
-
33751399295
-
MethBLAST and methPrimerDB: Web-tools for PCR based methylation analysis
-
Pattyn,F., Hoebeeck,J., Robbrecht,P., Michels,E., De Paepe,A., Bottu,G., Coornaert,D., Herzog,R., Speleman,F. and Vandesompele,J. (2006) methBLAST and methPrimerDB: web-tools for PCR based methylation analysis. BMC Bioinformatics, 7, 496.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 496
-
-
Pattyn, F.1
Hoebeeck, J.2
Robbrecht, P.3
Michels, E.4
De Paepe, A.5
Bottu, G.6
Coornaert, D.7
Herzog, R.8
Speleman, F.9
Vandesompele, J.10
-
17
-
-
39449095146
-
MethCancerDB - Aberrant DNA methylation in human cancer
-
DOI 10.1038/sj.bjc.6604219, PII 6604219
-
Lauss,M., Visne,I., Weinhaeusel,A., Vierlinger,K., Noehammer,C. and Kriegner,A. (2008) MethCancerDB-aberrant DNA methylation in human cancer. Br. J. Cancer, 98, 816-817. (Pubitemid 351272608)
-
(2008)
British Journal of Cancer
, vol.98
, Issue.4
, pp. 816-817
-
-
Lauss, M.1
Visne, I.2
Weinhaeusel, A.3
Vierlinger, K.4
Noehammer, C.5
Kriegner, A.6
-
18
-
-
38549099685
-
PubMeth: A cancer methylation database combining text-mining and expert annotation
-
DOI 10.1093/nar/gkm788
-
Ongenaert,M., Van Neste,L., De Meyer,T., Menschaert,G., Bekaert,S. and Van Criekinge,W. (2008) PubMeth: a cancer methylation database combining text-mining and expert annotation. Nucleic Acids Res., 36, D842-D846. (Pubitemid 351149833)
-
(2008)
Nucleic Acids Research
, vol.36
, Issue.SUPPL. 1
-
-
Ongenaert, M.1
Van Neste, L.2
De Meyer, T.3
Menschaert, G.4
Bekaert, S.5
Van Criekinge, W.6
-
19
-
-
39849091039
-
MeInfoText: Associated gene methylation and cancer information from text mining
-
Fang,Y.C., Huang,H.C. and Juan,H.F. (2008) MeInfoText: associated gene methylation and cancer information from text mining. BMC Bioinformatics, 9, 22.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 22
-
-
Fang, Y.C.1
Huang, H.C.2
Juan, H.F.3
-
20
-
-
38549129812
-
MethyCancer: The database of human DNA methylation and cancer
-
DOI 10.1093/nar/gkm730
-
He,X., Chang,S., Zhang,J., Zhao,Q., Xiang,H., Kusonmano,K., Yang,L., Sun,Z.S., Yang,H. and Wang,J. (2008) MethyCancer: the database of human DNA methylation and cancer. Nucleic Acids Res., 36, D836-D841. (Pubitemid 351149832)
-
(2008)
Nucleic Acids Research
, vol.36
, Issue.SUPPL. 1
-
-
He, X.1
Chang, S.2
Zhang, J.3
Zhao, Q.4
Xiang, H.5
Kusonmano, K.6
Yang, L.7
Sun, Z.S.8
Yang, H.9
Wang, J.10
-
21
-
-
78651291113
-
NGSmethDB: A database for next-generation sequencing single-cytosine- resolution DNA methylation data
-
Hackenberg,M., Barturen,G. and Oliver,J.L. (2011) NGSmethDB: a database for next-generation sequencing single-cytosine-resolution DNA methylation data. Nucleic Acids Res., 39, D75-D79.
-
(2011)
Nucleic Acids Res.
, vol.39
-
-
Hackenberg, M.1
Barturen, G.2
Oliver, J.L.3
-
22
-
-
79953123510
-
Breast cancer methylomes establish an epigenomic foundation for metastasis
-
Fang,F., Turcan,S., Rimner,A., Kaufman,A., Giri,D., Morris,L.G., Shen,R., Seshan,V., Mo,Q., Heguy,A. et al. (2011) Breast cancer methylomes establish an epigenomic foundation for metastasis. Sci. Transl. Med., 3, 75ra25.
-
(2011)
Sci. Transl. Med.
, vol.3
-
-
Fang, F.1
Turcan, S.2
Rimner, A.3
Kaufman, A.4
Giri, D.5
Morris, L.G.6
Shen, R.7
Seshan, V.8
Mo, Q.9
Heguy, A.10
-
23
-
-
77649238322
-
DNA methylome of familial breast cancer identifies distinct profiles defined by mutation status
-
Flanagan,J.M., Cocciardi,S., Waddell,N., Johnstone,C.N., Marsh,A., Henderson,S., Simpson,P., da Silva,L., Khanna,K., Lakhani,S. et al. (2010) DNA methylome of familial breast cancer identifies distinct profiles defined by mutation status. Am. J. Hum. Genet., 86, 420-433.
-
(2010)
Am. J. Hum. Genet.
, vol.86
, pp. 420-433
-
-
Flanagan, J.M.1
Cocciardi, S.2
Waddell, N.3
Johnstone, C.N.4
Marsh, A.5
Henderson, S.6
Simpson, P.7
Da Silva, L.8
Khanna, K.9
Lakhani, S.10
-
24
-
-
70349988272
-
The DNA methylome of pediatric acute lymphoblastic leukemia
-
Davidsson,J., Lilljebjorn,H., Andersson,A., Veerla,S., Heldrup,J., Behrendtz,M., Fioretos,T. and Johansson,B. (2009) The DNA methylome of pediatric acute lymphoblastic leukemia. Hum. Mol. Genet., 18, 4054-4065.
-
(2009)
Hum. Mol. Genet.
, vol.18
, pp. 4054-4065
-
-
Davidsson, J.1
Lilljebjorn, H.2
Andersson, A.3
Veerla, S.4
Heldrup, J.5
Behrendtz, M.6
Fioretos, T.7
Johansson, B.8
-
25
-
-
33750060054
-
Differential DNA methylation patterns of small B-cell lymphoma subclasses with different clinical behavior
-
DOI 10.1038/sj.leu.2404345, PII 2404345
-
Rahmatpanah,F.B., Carstens,S., Guo,J., Sjahputera,O., Taylor,K.H., Duff,D., Shi,H., Davis,J.W., Hooshmand,S.I., Chitma-Matsiga,R. et al. (2006) Differential DNA methylation patterns of small B-cell lymphoma subclasses with different clinical behavior. Leukemia, 20, 1855-1862. (Pubitemid 44574996)
-
(2006)
Leukemia
, vol.20
, Issue.10
, pp. 1855-1862
-
-
Rahmatpanah, F.B.1
Carstens, S.2
Guo, J.3
Sjahputera, O.4
Taylor, K.H.5
Duff, D.6
Shi, H.7
Davis, J.W.8
Hooshmand, S.I.9
Chitma-Matsiga, R.10
Caldwell, C.W.11
-
26
-
-
78651320424
-
The UCSC Genome Browser database: Update 2011
-
Fujita,P.A., Rhead,B., Zweig,A.S., Hinrichs,A.S., Karolchik,D., Cline,M.S., Goldman,M., Barber,G.P., Clawson,H., Coelho,A. et al. (2011) The UCSC Genome Browser database: update 2011. Nucleic Acids Res., 39, D876-D882.
-
(2011)
Nucleic Acids Res.
, vol.39
-
-
Fujita, P.A.1
Rhead, B.2
Zweig, A.S.3
Hinrichs, A.S.4
Karolchik, D.5
Cline, M.S.6
Goldman, M.7
Barber, G.P.8
Clawson, H.9
Coelho, A.10
-
27
-
-
75649114257
-
CpG-MI: A novel approach for identifying functional CpG islands in mammalian genomes
-
Su,J., Zhang,Y., Lv,J., Liu,H., Tang,X., Wang,F., Qi,Y., Feng,Y. and Li,X. (2010) CpG-MI: a novel approach for identifying functional CpG islands in mammalian genomes. Nucleic Acids Res., 38, e6.
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
Su, J.1
Zhang, Y.2
Lv, J.3
Liu, H.4
Tang, X.5
Wang, F.6
Qi, Y.7
Feng, Y.8
Li, X.9
-
28
-
-
75549084321
-
HHMD: The human histone modification database
-
Zhang,Y., Lv,J., Liu,H., Zhu,J., Su,J., Wu,Q., Qi,Y., Wang,F. and Li,X. (2010) HHMD: the human histone modification database. Nucleic Acids Res., 38, D149-D154.
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
Zhang, Y.1
Lv, J.2
Liu, H.3
Zhu, J.4
Su, J.5
Wu, Q.6
Qi, Y.7
Wang, F.8
Li, X.9
-
29
-
-
24144449572
-
Evaluation of a large, population-based sample supports a CpG island methylator phenotype in colon cancer
-
DOI 10.1053/j.gastro.2005.06.020, PII S0016508505011224
-
Samowitz,W.S., Albertsen,H., Herrick,J., Levin,T.R., Sweeney,C., Murtaugh,M.A., Wolff,R.K. and Slattery,M.L. (2005) Evaluation of a large, population-based sample supports a CpG island methylator phenotype in colon cancer. Gastroenterology, 129, 837-845. (Pubitemid 41242676)
-
(2005)
Gastroenterology
, vol.129
, Issue.3
, pp. 837-845
-
-
Samowitz, W.S.1
Albertsen, H.2
Herrick, J.3
Levin, T.R.4
Sweeney, C.5
Murtaugh, M.A.6
Wolff, R.K.7
Slattery, M.L.8
-
30
-
-
76249105279
-
Genome-wide prioritization of disease genes and identification of disease-disease associations from an integrated human functional linkage network
-
Linghu,B., Snitkin,E.S., Hu,Z., Xia,Y. and Delisi,C. (2009) Genome-wide prioritization of disease genes and identification of disease-disease associations from an integrated human functional linkage network. Genome Biol., 10, R91.
-
(2009)
Genome Biol.
, vol.10
-
-
Linghu, B.1
Snitkin, E.S.2
Hu, Z.3
Xia, Y.4
Delisi, C.5
-
31
-
-
79960530899
-
Genomic imprinting: The emergence of an epigenetic paradigm
-
Ferguson-Smith,A.C. (2011) Genomic imprinting: the emergence of an epigenetic paradigm. Nat. Rev. Genet., 12, 565-575.
-
(2011)
Nat. Rev. Genet.
, vol.12
, pp. 565-575
-
-
Ferguson-Smith, A.C.1
-
32
-
-
79956006215
-
QDMR: A quantitative method for identification of differentially methylated regions by entropy
-
Zhang,Y., Liu,H., Lv,J., Xiao,X., Zhu,J., Liu,X., Su,J., Li,X., Wu,Q., Wang,F. et al. (2011) QDMR: a quantitative method for identification of differentially methylated regions by entropy. Nucleic Acids Res., 39, e58.
-
(2011)
Nucleic Acids Res.
, vol.39
-
-
Zhang, Y.1
Liu, H.2
Lv, J.3
Xiao, X.4
Zhu, J.5
Liu, X.6
Su, J.7
Li, X.8
Wu, Q.9
Wang, F.10
|