-
1
-
-
84865143279
-
-
Principles of Polymer Chemistry (Cornell University Press, Ithaca
-
P. J. Flory, Principles of Polymer Chemistry (Cornell University Press, Ithaca, 1953).
-
(1953)
-
-
Flory, P.J.1
-
2
-
-
73649152457
-
Allosteric Proteins and Cellular Control Systems
-
J. Monod, J-P. Changeux, and F. Jacob, Allosteric Proteins and Cellular Control Systems, J. Mol. Biol. 6, 306 (1963).
-
(1963)
J. Mol. Biol.
, vol.6
, pp. 306
-
-
Monod, J.1
Changeux, J-P.2
Jacob, F.3
-
3
-
-
0015529611
-
Nature of Haem-Haem Interaction
-
Nature (London)
-
M. F. Perutz, Nature of Haem-Haem Interaction, Nature (London) 237, 495 (1972).
-
(1972)
, vol.237
, pp. 495
-
-
Perutz, M.F.1
-
4
-
-
0015698515
-
Relation between Structure, Co-operativity and Spectra in a Model of Hemoglobin Action
-
J. J. Hopfield, Relation between Structure, Co-operativity and Spectra in a Model of Hemoglobin Action, J. Mol. Biol. 77, 207 (1973).
-
(1973)
J. Mol. Biol.
, vol.77
, pp. 207
-
-
Hopfield, J.J.1
-
5
-
-
55849099561
-
-
Y. Savir and T. Tlusty, Conformational Proofreading: The Impact of Conformational Changes on the Specificity of Molecular Recognition, PLoS ONE 2, e468 (2007).
-
(2007)
, vol.2
-
-
-
6
-
-
78751649969
-
Mechano-Chemistry of the Enzyme Guanylate Kinase
-
C-Y. Tseng, A.Wang, and G. Zocchi, Mechano-Chemistry of the Enzyme Guanylate Kinase, Europhys. Lett. 91, 18005 (2010).
-
(2010)
Europhys. Lett.
, vol.91
, pp. 18005
-
-
Tseng, C-Y.1
Wang, A.2
Zocchi, G.3
-
7
-
-
67650331321
-
Controlling Proteins through Molecular Springs
-
G. Zocchi, Controlling Proteins through Molecular Springs, Annu. Rev. Biophys. 38, 75 (2009).
-
(2009)
Annu. Rev. Biophys.
, vol.38
, pp. 75
-
-
Zocchi, G.1
-
8
-
-
33847164986
-
Biological Consequences of Tightly Bent DNA: The Other Life of a Macromolecular Celebrity
-
G. H. Garcia, P. Grayson, L. Han, M. Inamdar, J. Kondev, P. C. Nelson, R. Phillips, J. Widom, and P. A. Wiggins, Biological Consequences of Tightly Bent DNA: The Other Life of a Macromolecular Celebrity, Biopolymers 85, 115 (2006).
-
(2006)
Biopolymers
, vol.85
, pp. 115
-
-
Garcia, G.H.1
Grayson, P.2
Han, L.3
Inamdar, M.4
Kondev, J.5
Nelson, P.C.6
Phillips, R.7
Widom, G.8
Wiggins, P.A.9
-
9
-
-
64049116057
-
DNA Nanomechanics in the Nucleosome
-
N. B. Becker and R. Everaers, DNA Nanomechanics in the Nucleosome, Structure 17, 579 (2009).
-
(2009)
Structure
, vol.17
, pp. 579
-
-
Becker, N.B.1
Everaers, R.2
-
10
-
-
85015087906
-
Ten Years of Tension: Single-Molecule DNA Mechanics
-
C. Bustamante, Z. Bryant, and S. B. Smith, Ten Years of Tension: Single-Molecule DNA Mechanics, Nature (London) 421, 423 (2003).
-
(2003)
Nature (London)
, vol.421
, pp. 423
-
-
Bustamante, C.1
Bryant, Z.2
Smith, S.B.3
-
11
-
-
33845810345
-
High Flexibility of DNA on Short Length Scales Probed by Atomic Force Microscopy
-
P. A. Wiggins, T. van der Heijden, F. Moreno-Herrero, A. Spakowitz, R. Phillips, J. Widom, C. Dekker, and P. C. Nelson, High Flexibility of DNA on Short Length Scales Probed by Atomic Force Microscopy, Nature Nanotech. 1, 137 (2006).
-
(2006)
Nature Nanotech.
, vol.1
, pp. 137
-
-
Wiggins, P.A.1
van der Heijden, T.2
Moreno-Herrero, F.3
Spakowitz, A.4
Phillips, R.5
Widom, J.6
Dekker, C.7
Nelson, P.C.8
-
12
-
-
2342518189
-
Spontaneous Sharp Bending of Double-Stranded DNA
-
T. E. Cloutier and J. Widom, Spontaneous Sharp Bending of Double-Stranded DNA, Mol. Cell 14, 355 (2004).
-
(2004)
Mol. Cell
, vol.14
, pp. 355
-
-
Cloutier, T.E.1
Widom, J.2
-
13
-
-
17244362931
-
Cyclization of Short DNA Fragments and Bending Fluctuations of the Double Helix
-
Q. Du, C. Smith, N. Shiffeldrim, M. Vologodskaia, and A. Vologodskii, Cyclization of Short DNA Fragments and Bending Fluctuations of the Double Helix, Proc. Natl. Acad. Sci. U.S.A. 102, 5397 (2005).
-
(2005)
Proc. Natl. Acad. Sci. U.S.A.
, vol.102
, pp. 5397
-
-
Du, Q.1
Smith, C.2
Shiffeldrim, N.3
Vologodskaia, M.4
Vologodskii, A.5
-
14
-
-
40249090005
-
Kinking the Double Helix by Bending Deformation
-
Q. Du, A. Kotlyar, and A. Vologodskii, Kinking the Double Helix by Bending Deformation, Nucleic Acids Res. 36, 1120 (2007).
-
(2007)
Nucleic Acids Res.
, vol.36
, pp. 1120
-
-
Du, Q.1
Kotlyar, A.2
Vologodskii, A.3
-
15
-
-
40749090377
-
DNA Bending Stiffness on Small Length Scales
-
C. Yuan, H. Chen, X.W. Lou, and L. A. Archer, DNA Bending Stiffness on Small Length Scales, Phys. Rev. Lett. 100, 018102 (2008).
-
(2008)
Phys. Rev. Lett.
, vol.100
, pp. 018102
-
-
Yuan, C.1
Chen, H.2
Lou, X.W.3
Archer, L.A.4
-
16
-
-
19544379865
-
Localized Single-Stranded Bubble Mechanism for Cyclization of Short Double Helix DNA
-
J. Yan and J. F. Marko, Localized Single-Stranded Bubble Mechanism for Cyclization of Short Double Helix DNA, Phys. Rev. Lett. 93, 108108 (2004).
-
(2004)
Phys. Rev. Lett.
, vol.93
, pp. 108108
-
-
Yan, J.1
Marko, J.F.2
-
17
-
-
27144531204
-
Allosteric Control through Mechanical Tension
-
B. Choi, G. Zocchi, Y. Wu, S. Chan, and L. J. Perry, Allosteric Control through Mechanical Tension, Phys. Rev. Lett. 95, 078102 (2005).
-
(2005)
Phys. Rev. Lett.
, vol.95
, pp. 078102
-
-
Choi, B.1
Zocchi, G.2
Wu, Y.3
Chan, S.4
Perry, L.J.5
-
18
-
-
66149093487
-
Elastic Energy Driven Polymerization
-
A. Wang and G. Zocchi, Elastic Energy Driven Polymerization, Biophys. J. 96, 2344 (2009).
-
(2009)
Biophys. J.
, vol.96
, pp. 2344
-
-
Wang, A.1
Zocchi, G.2
-
19
-
-
78751641340
-
The Elastic Energy of Sharply Bent Nicked DNA
-
H. Qu, C-Y. Tseng, Y. Wang, A. J. Levine, and G. Zocchi, The Elastic Energy of Sharply Bent Nicked DNA, Europhys. Lett. 90, 18003 (2010).
-
(2010)
Europhys. Lett.
, vol.90
, pp. 18003
-
-
Qu, H.1
Tseng, C-Y.2
Wang, Y.3
Levine, A.J.4
Zocchi, G.5
-
20
-
-
79955773923
-
The Complete Bending Energy Function for Nicked DNA
-
H. Qu and G. Zocchi, The Complete Bending Energy Function for Nicked DNA, Europhys. Lett. 94, 18003 (2011).
-
(2011)
Europhys. Lett.
, vol.94
, pp. 18003
-
-
Qu, H.1
Zocchi, G.2
-
21
-
-
0028071373
-
Entropic Elasticity of -Phage DNA
-
C. Bustamante, J. F. Marko, E. D. Siggia, and S. Smith, Entropic Elasticity of -Phage DNA, Science 265, 1599 (1994).
-
(1994)
Science
, vol.265
, pp. 1599
-
-
Bustamante, C.1
Marko, J.F.2
Siggia, E.D.3
Smith, S.4
-
22
-
-
45849154696
-
Statistical Mechanics of Base Stacking and Pairing in DNA Melting
-
V. Ivanov, Y. Zeng, and G. Zocchi, Statistical Mechanics of Base Stacking and Pairing in DNA Melting, Phys. Rev. E 70, 051907 (2004).
-
(2004)
Phys. Rev. E
, vol.70
, pp. 051907
-
-
Ivanov, V.1
Zeng, Y.2
Zocchi, G.3
-
23
-
-
23144440350
-
DINAMelt Web Server for Nucleic Acid Melting Prediction
-
N. R. Markham and M. Zuker, DINAMelt Web Server for Nucleic Acid Melting Prediction, Nucleic Acids Res. 33, W577 (2005).
-
(2005)
Nucleic Acids Res.
, vol.33
-
-
Markham, N.R.1
Zuker, M.2
-
24
-
-
84904537084
-
Phase Transition of a Molecular Zipper
-
C. Kittel, Phase Transition of a Molecular Zipper, Am. J. Phys. 37, 917 (1969).
-
(1969)
Am. J. Phys.
, vol.37
, pp. 917
-
-
Kittel, C.1
-
25
-
-
44949083455
-
Modelling DNA at the Mesoscale: A Challenge for Nonlinear Science?
-
M. Peyrard, S. Cuesta-López, and G. James, Modelling DNA at the Mesoscale: A Challenge for Nonlinear Science?, Nonlinearity 21, T91 (2008).
-
(2008)
Nonlinearity
, vol.21
-
-
Peyrard, M.1
Cuesta-Lopez, S.2
James, G.3
-
26
-
-
18144371205
-
Bubble Nucleation and Cooperativity in DNA Melting
-
S. Ares, N. K. Voulgarakis, K. O. Rasmussen, and A. R. Bishop, Bubble Nucleation and Cooperativity in DNA Melting, Phys. Rev. Lett. 94, 035504 (2005).
-
(2005)
Phys. Rev. Lett.
, vol.94
, pp. 035504
-
-
Ares, S.1
Voulgarakis, N.K.2
Rasmussen, K.O.3
Bishop, A.R.4
-
27
-
-
0030024985
-
Overstretching BDNA: The Elastic Response of Individual Double-Stranded and Single-Stranded DNA Molecules
-
S. B. Smith, Y. Cui, and C. Bustamante, Overstretching BDNA: The Elastic Response of Individual Double-Stranded and Single-Stranded DNA Molecules, Science 271, 795 (1996).
-
(1996)
Science
, vol.271
, pp. 795
-
-
Smith, S.B.1
Cui, Y.2
Bustamante, C.3
-
28
-
-
0037453011
-
High-Throughput Approach for Detection of DNA Bending and Flexibility Based on Cyclization
-
Y. Zhang and D. M. Crothers, High-Throughput Approach for Detection of DNA Bending and Flexibility Based on Cyclization, Proc. Natl. Acad. Sci. U.S.A. 100, 3161 (2003).
-
(2003)
Proc. Natl. Acad. Sci. U.S.A.
, vol.100
, pp. 3161
-
-
Zhang, Y.1
Crothers, D.M.2
-
29
-
-
0033591465
-
Expanded Sequence Dependence of Thermodynamic Parameters Improves Prediction of RNA Secondary Structure
-
D. H. Mathews, J. Sabina, M. Zuker, and D. H. Turner, Expanded Sequence Dependence of Thermodynamic Parameters Improves Prediction of RNA Secondary Structure, J. Mol. Biol. 288, 911 (1999).
-
(1999)
J. Mol. Biol.
, vol.288
, pp. 911
-
-
Mathews, D.H.1
Sabina, J.2
Zuker, M.3
Turner, D.H.4
-
30
-
-
41349084347
-
Exact Theory of Kinkable Elastic Polymers
-
P. A. Wiggins, R. Phillips, and P. C. Nelson, Exact Theory of Kinkable Elastic Polymers, Phys. Rev. E 71, 021909 (2005).
-
(2005)
Phys. Rev. E
, vol.71
, pp. 021909
-
-
Wiggins, P.A.1
Phillips, R.2
Nelson, P.C.3
-
31
-
-
84865142344
-
-
Statistical Physics of Unzipping DNA, arXiv:cond-mat/0309559v1.
-
D. R. Nelson, Statistical Physics of Unzipping DNA, arXiv:cond-mat/0309559v1.
-
-
-
Nelson, D.R.1
-
32
-
-
79952326786
-
Temperature Dependence of DNA Persistence Length
-
S. Geggier, A. Kotlyar, and A. Vologodskii, Temperature Dependence of DNA Persistence Length, Nucleic Acids Res. 39, 1419 (2010).
-
(2010)
Nucleic Acids Res.
, vol.39
, pp. 1419
-
-
Geggier, S.1
Kotlyar, A.2
Vologodskii, A.3
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