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Volumn 7, Issue 6, 2012, Pages

Novel evidence of HBV recombination in family cluster infections in Western China

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CHINA; CLUSTER ANALYSIS; DNA SEQUENCE; FEMALE; GENOTYPE; HEPATITIS B; HEPATITIS B VIRUS; HUMAN; MAJOR CLINICAL STUDY; MALE; MIXED INFECTION; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENETIC TREE; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; VIRUS RECOMBINANT; VIRUS RECOMBINATION; VIRUS STRAIN; CROSSING OVER; FAMILY; GENETIC RECOMBINATION; GENETICS; MOLECULAR GENETICS; PHYLOGENY; SEQUENCE ALIGNMENT; VIROLOGY;

EID: 84861904826     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0038241     Document Type: Article
Times cited : (11)

References (33)
  • 1
    • 0025292004 scopus 로고
    • Phosphoprotein and nucleocapsid protein evolution of vesicular stomatitis virus New Jersey
    • Bilsel PA, Rowe JE, Fitch WM, Nichol ST, (1990) Phosphoprotein and nucleocapsid protein evolution of vesicular stomatitis virus New Jersey. J Virol 64: 2498-2504.
    • (1990) J Virol , vol.64 , pp. 2498-2504
    • Bilsel, P.A.1    Rowe, J.E.2    Fitch, W.M.3    Nichol, S.T.4
  • 2
    • 0023678258 scopus 로고
    • Typing hepatitis B virus by homology in nucleotide sequence: comparison of surface antigen subtypes
    • Okamoto H, Tsuda F, Sakugawa H, Sastrosoewignjo RI, Imai M, et al. (1988) Typing hepatitis B virus by homology in nucleotide sequence: comparison of surface antigen subtypes. J Gen Virol 69 (Pt 10): 2575-2583.
    • (1988) J Gen Virol , vol.69 , Issue.Pt 10 , pp. 2575-2583
    • Okamoto, H.1    Tsuda, F.2    Sakugawa, H.3    Sastrosoewignjo, R.I.4    Imai, M.5
  • 3
    • 0026536025 scopus 로고
    • Comparison of the amino acid sequences of nine different serotypes of hepatitis B surface antigen and genomic classification of the corresponding hepatitis B virus strains
    • Norder H, Hammas B, Lofdahl S, Courouce AM, Magnius LO, (1992) Comparison of the amino acid sequences of nine different serotypes of hepatitis B surface antigen and genomic classification of the corresponding hepatitis B virus strains. J Gen Virol 73 (Pt 5): 1201-1208.
    • (1992) J Gen Virol , vol.73 , Issue.Pt 5 , pp. 1201-1208
    • Norder, H.1    Hammas, B.2    Lofdahl, S.3    Courouce, A.M.4    Magnius, L.O.5
  • 4
    • 0032565656 scopus 로고    scopus 로고
    • The hepatitis B virus seroconversion to anti-HBe is frequently associated with HBV genotype changes and selection of preS2-defective particles in chronically infected children
    • Gerner PR, Friedt M, Oettinger R, Lausch E, Wirth S, (1998) The hepatitis B virus seroconversion to anti-HBe is frequently associated with HBV genotype changes and selection of preS2-defective particles in chronically infected children. Virology 245: 163-172.
    • (1998) Virology , vol.245 , pp. 163-172
    • Gerner, P.R.1    Friedt, M.2    Oettinger, R.3    Lausch, E.4    Wirth, S.5
  • 5
    • 33748946083 scopus 로고    scopus 로고
    • Mixed hepatitis B virus genotype infections: the more, the worse?
    • Liu CJ, Kao JH, Chen DS, (2006) Mixed hepatitis B virus genotype infections: the more, the worse? Hepatology 44: 770.
    • (2006) Hepatology , vol.44 , pp. 770
    • Liu, C.J.1    Kao, J.H.2    Chen, D.S.3
  • 6
    • 84984559255 scopus 로고    scopus 로고
    • High prevalence of occult hepatitis B virus infection in Taiwanese intravenous drug users
    • Lin CL, Liu CJ, Chen PJ, Lai MY, Chen DS, et al. (2007) High prevalence of occult hepatitis B virus infection in Taiwanese intravenous drug users. J Med Virol 79: 1674-1678.
    • (2007) J Med Virol , vol.79 , pp. 1674-1678
    • Lin, C.L.1    Liu, C.J.2    Chen, P.J.3    Lai, M.Y.4    Chen, D.S.5
  • 7
    • 16844364045 scopus 로고    scopus 로고
    • A new intertype recombinant between genotypes C and D of hepatitis B virus identified in China
    • Wang Z, Liu Z, Zeng G, Wen S, Qi Y, et al. (2005) A new intertype recombinant between genotypes C and D of hepatitis B virus identified in China. J Gen Virol 86: 985-990.
    • (2005) J Gen Virol , vol.86 , pp. 985-990
    • Wang, Z.1    Liu, Z.2    Zeng, G.3    Wen, S.4    Qi, Y.5
  • 8
    • 79954464369 scopus 로고    scopus 로고
    • Geographical and ethnic distribution of the HBV C/D recombinant on the Qinghai-Tibet Plateau
    • Zhou B, Xiao L, Wang Z, Chang ET, Chen J, et al. (2011) Geographical and ethnic distribution of the HBV C/D recombinant on the Qinghai-Tibet Plateau. PLoS One 6: e18708.
    • (2011) PLoS One , vol.6
    • Zhou, B.1    Xiao, L.2    Wang, Z.3    Chang, E.T.4    Chen, J.5
  • 9
    • 7044231597 scopus 로고    scopus 로고
    • A novel hepatitis B virus genotyping system by using restriction fragment length polymorphism patterns of S gene amplicons
    • Zeng GB, Wen SJ, Wang ZH, Yan L, Sun J, et al. (2004) A novel hepatitis B virus genotyping system by using restriction fragment length polymorphism patterns of S gene amplicons. World J Gastroenterol 10: 3132-3136.
    • (2004) World J Gastroenterol , vol.10 , pp. 3132-3136
    • Zeng, G.B.1    Wen, S.J.2    Wang, Z.H.3    Yan, L.4    Sun, J.5
  • 10
    • 0035063443 scopus 로고    scopus 로고
    • A novel variant genotype C of hepatitis B virus identified in isolates from Australian Aborigines: complete genome sequence and phylogenetic relatedness
    • Sugauchi F, Mizokami M, Orito E, Ohno T, Kato H, et al. (2001) A novel variant genotype C of hepatitis B virus identified in isolates from Australian Aborigines: complete genome sequence and phylogenetic relatedness. J Gen Virol 82: 883-892.
    • (2001) J Gen Virol , vol.82 , pp. 883-892
    • Sugauchi, F.1    Mizokami, M.2    Orito, E.3    Ohno, T.4    Kato, H.5
  • 11
    • 0029082116 scopus 로고
    • A novel method for efficient amplification of whole hepatitis B virus genomes permits rapid functional analysis and reveals deletion mutants in immunosuppressed patients
    • Gunther S, Li BC, Miska S, Kruger DH, Meisel H, et al. (1995) A novel method for efficient amplification of whole hepatitis B virus genomes permits rapid functional analysis and reveals deletion mutants in immunosuppressed patients. J Virol 69: 5437-5444.
    • (1995) J Virol , vol.69 , pp. 5437-5444
    • Gunther, S.1    Li, B.C.2    Miska, S.3    Kruger, D.H.4    Meisel, H.5
  • 12
    • 0037382062 scopus 로고    scopus 로고
    • Epidemiologic and virologic characteristics of hepatitis B virus genotype B having the recombination with genotype C
    • Sugauchi F, Orito E, Ichida T, Kato H, Sakugawa H, et al. (2003) Epidemiologic and virologic characteristics of hepatitis B virus genotype B having the recombination with genotype C. Gastroenterology 124: 925-932.
    • (2003) Gastroenterology , vol.124 , pp. 925-932
    • Sugauchi, F.1    Orito, E.2    Ichida, T.3    Kato, H.4    Sakugawa, H.5
  • 13
    • 0033824415 scopus 로고    scopus 로고
    • RDP: detection of recombination amongst aligned sequences
    • Martin D, Rybicki E, (2000) RDP: detection of recombination amongst aligned sequences. Bioinformatics 16: 562-563.
    • (2000) Bioinformatics , vol.16 , pp. 562-563
    • Martin, D.1    Rybicki, E.2
  • 14
    • 33751253784 scopus 로고    scopus 로고
    • Recombination patterns in aphthoviruses mirror those found in other picornaviruses
    • Heath L, van der Walt E, Varsani A, Martin DP, (2006) Recombination patterns in aphthoviruses mirror those found in other picornaviruses. J Virol 80: 11827-11832.
    • (2006) J Virol , vol.80 , pp. 11827-11832
    • Heath, L.1    van der Walt, E.2    Varsani, A.3    Martin, D.P.4
  • 15
    • 0032853634 scopus 로고    scopus 로고
    • Evolutionary aspects of recombination in RNA viruses
    • Worobey M, Holmes EC, (1999) Evolutionary aspects of recombination in RNA viruses. J Gen Virol 80 (Pt 10): 2535-2543.
    • (1999) J Gen Virol , vol.80 , Issue.Pt 10 , pp. 2535-2543
    • Worobey, M.1    Holmes, E.C.2
  • 16
    • 77952690629 scopus 로고    scopus 로고
    • A novel hepatitis B virus (HBV) subgenotype D (D8) strain, resulting from recombination between genotypes D and E, is circulating in Niger along with HBV/E strains
    • Abdou CM, Brichler S, Mansour W, Le Gal F, Garba A, et al. (2010) A novel hepatitis B virus (HBV) subgenotype D (D8) strain, resulting from recombination between genotypes D and E, is circulating in Niger along with HBV/E strains. J Gen Virol 91: 1609-1620.
    • (2010) J Gen Virol , vol.91 , pp. 1609-1620
    • Abdou, C.M.1    Brichler, S.2    Mansour, W.3    Le Gal, F.4    Garba, A.5
  • 17
    • 77956599423 scopus 로고    scopus 로고
    • Genotype X/C recombinant (putative genotype I) of hepatitis B virus is rare in Hanoi, Vietnam-genotypes B4 and C1 predominate
    • Phung TB, Alestig E, Nguyen TL, Hannoun C, Lindh M, (2010) Genotype X/C recombinant (putative genotype I) of hepatitis B virus is rare in Hanoi, Vietnam-genotypes B4 and C1 predominate. J Med Virol 82: 1327-1333.
    • (2010) J Med Virol , vol.82 , pp. 1327-1333
    • Phung, T.B.1    Alestig, E.2    Nguyen, T.L.3    Hannoun, C.4    Lindh, M.5
  • 18
    • 79251494131 scopus 로고    scopus 로고
    • A complex hepatitis B virus (X/C) recombinant is common in Long An county, Guangxi and may have originated in southern China
    • Fang ZL, Hue S, Sabin CA, Li GJ, Yang JY, et al. (2011) A complex hepatitis B virus (X/C) recombinant is common in Long An county, Guangxi and may have originated in southern China. J Gen Virol 92: 402-411.
    • (2011) J Gen Virol , vol.92 , pp. 402-411
    • Fang, Z.L.1    Hue, S.2    Sabin, C.A.3    Li, G.J.4    Yang, J.Y.5
  • 19
    • 78650864453 scopus 로고    scopus 로고
    • Hepatitis B virus (HBV) infection and recombination between HBV genotypes D and E in asymptomatic blood donors from Khartoum, Sudan
    • Mahgoub S, Candotti D, El EM, Allain JP, (2011) Hepatitis B virus (HBV) infection and recombination between HBV genotypes D and E in asymptomatic blood donors from Khartoum, Sudan. J Clin Microbiol 49: 298-306.
    • (2011) J Clin Microbiol , vol.49 , pp. 298-306
    • Mahgoub, S.1    Candotti, D.2    El, E.M.3    Allain, J.P.4
  • 20
    • 0033824723 scopus 로고    scopus 로고
    • An aberrant genotype revealed in recombinant hepatitis B virus strains from Vietnam
    • Hannoun C, Norder H, Lindh M, (2000) An aberrant genotype revealed in recombinant hepatitis B virus strains from Vietnam. J Gen Virol 81: 2267-2272.
    • (2000) J Gen Virol , vol.81 , pp. 2267-2272
    • Hannoun, C.1    Norder, H.2    Lindh, M.3
  • 21
    • 0026009231 scopus 로고
    • Random nature of coronavirus RNA recombination in the absence of selection pressure
    • Banner LR, Lai MM, (1991) Random nature of coronavirus RNA recombination in the absence of selection pressure. Virology 185: 441-445.
    • (1991) Virology , vol.185 , pp. 441-445
    • Banner, L.R.1    Lai, M.M.2
  • 22
    • 0036102083 scopus 로고    scopus 로고
    • Characteristics of hepatitis B virus isolates of genotype G and their phylogenetic differences from the other six genotypes (A through F)
    • Kato H, Orito E, Gish RG, Sugauchi F, Suzuki S, et al. (2002) Characteristics of hepatitis B virus isolates of genotype G and their phylogenetic differences from the other six genotypes (A through F). J Virol 76: 6131-6137.
    • (2002) J Virol , vol.76 , pp. 6131-6137
    • Kato, H.1    Orito, E.2    Gish, R.G.3    Sugauchi, F.4    Suzuki, S.5
  • 23
    • 33750633962 scopus 로고    scopus 로고
    • Influence of hepatitis B virus genotypes on the intra- and extracellular expression of viral DNA and antigens
    • Sugiyama M, Tanaka Y, Kato T, Orito E, Ito K, et al. (2006) Influence of hepatitis B virus genotypes on the intra- and extracellular expression of viral DNA and antigens. Hepatology 44: 915-924.
    • (2006) Hepatology , vol.44 , pp. 915-924
    • Sugiyama, M.1    Tanaka, Y.2    Kato, T.3    Orito, E.4    Ito, K.5
  • 24
    • 34247379799 scopus 로고    scopus 로고
    • Early dynamics of hepatitis B virus in chimeric mice carrying human hepatocytes monoinfected or coinfected with genotype G
    • Sugiyama M, Tanaka Y, Sakamoto T, Maruyama I, Shimada T, et al. (2007) Early dynamics of hepatitis B virus in chimeric mice carrying human hepatocytes monoinfected or coinfected with genotype G. Hepatology 45: 929-937.
    • (2007) Hepatology , vol.45 , pp. 929-937
    • Sugiyama, M.1    Tanaka, Y.2    Sakamoto, T.3    Maruyama, I.4    Shimada, T.5
  • 25
    • 33746817410 scopus 로고    scopus 로고
    • Identification of Hepatitis B virus putative intergenotype recombinants by using fragment typing
    • Yang J, Xing K, Deng R, Wang J, Wang X, (2006) Identification of Hepatitis B virus putative intergenotype recombinants by using fragment typing. J Gen Virol 87: 2203-2215.
    • (2006) J Gen Virol , vol.87 , pp. 2203-2215
    • Yang, J.1    Xing, K.2    Deng, R.3    Wang, J.4    Wang, X.5
  • 26
    • 43949090856 scopus 로고    scopus 로고
    • New complex recombinant genotype of hepatitis B virus identified in Vietnam
    • Tran TT, Trinh TN, Abe K, (2008) New complex recombinant genotype of hepatitis B virus identified in Vietnam. J Virol 82: 5657-5663.
    • (2008) J Virol , vol.82 , pp. 5657-5663
    • Tran, T.T.1    Trinh, T.N.2    Abe, K.3
  • 27
    • 29744442930 scopus 로고    scopus 로고
    • Recombination in the genesis and evolution of hepatitis B virus genotypes
    • Simmonds P, Midgley S, (2005) Recombination in the genesis and evolution of hepatitis B virus genotypes. J Virol 79: 15467-15476.
    • (2005) J Virol , vol.79 , pp. 15467-15476
    • Simmonds, P.1    Midgley, S.2
  • 28
    • 0034736581 scopus 로고    scopus 로고
    • Homologous recombination between different genotypes of hepatitis B virus
    • Morozov V, Pisareva M, Groudinin M, (2000) Homologous recombination between different genotypes of hepatitis B virus. Gene 260: 55-65.
    • (2000) Gene , vol.260 , pp. 55-65
    • Morozov, V.1    Pisareva, M.2    Groudinin, M.3
  • 29
    • 0034964464 scopus 로고    scopus 로고
    • Hepatitis B virus DNA in serum of healthy black African adults positive for hepatitis B surface antibody alone: possible association with recombination between genotypes A and D
    • Owiredu WK, Kramvis A, Kew MC, (2001) Hepatitis B virus DNA in serum of healthy black African adults positive for hepatitis B surface antibody alone: possible association with recombination between genotypes A and D. J Med Virol 64: 441-454.
    • (2001) J Med Virol , vol.64 , pp. 441-454
    • Owiredu, W.K.1    Kramvis, A.2    Kew, M.C.3
  • 30
    • 21444439602 scopus 로고    scopus 로고
    • A new subtype (subgenotype) Ac (A3) of hepatitis B virus and recombination between genotypes A and E in Cameroon
    • Kurbanov F, Tanaka Y, Fujiwara K, Sugauchi F, Mbanya D, et al. (2005) A new subtype (subgenotype) Ac (A3) of hepatitis B virus and recombination between genotypes A and E in Cameroon. J Gen Virol 86: 2047-2056.
    • (2005) J Gen Virol , vol.86 , pp. 2047-2056
    • Kurbanov, F.1    Tanaka, Y.2    Fujiwara, K.3    Sugauchi, F.4    Mbanya, D.5
  • 31
    • 43949090856 scopus 로고    scopus 로고
    • New complex recombinant genotype of hepatitis B virus identified in Vietnam
    • Tran TT, Trinh TN, Abe K, (2008) New complex recombinant genotype of hepatitis B virus identified in Vietnam. J Virol 82: 5657-5663.
    • (2008) J Virol , vol.82 , pp. 5657-5663
    • Tran, T.T.1    Trinh, T.N.2    Abe, K.3
  • 32
    • 70349731726 scopus 로고    scopus 로고
    • A genetic variant of hepatitis B virus divergent from known human and ape genotypes isolated from a Japanese patient and provisionally assigned to new genotype J
    • Tatematsu K, Tanaka Y, Kurbanov F, Sugauchi F, Mano S, et al. (2009) A genetic variant of hepatitis B virus divergent from known human and ape genotypes isolated from a Japanese patient and provisionally assigned to new genotype J. J Virol 83: 10538-10547.
    • (2009) J Virol , vol.83 , pp. 10538-10547
    • Tatematsu, K.1    Tanaka, Y.2    Kurbanov, F.3    Sugauchi, F.4    Mano, S.5
  • 33
    • 0036100298 scopus 로고    scopus 로고
    • Hepatitis B virus of genotype B with or without recombination with genotype C over the precore region plus the core gene
    • Sugauchi F, Orito E, Ichida T, Kato H, Sakugawa H, et al. (2002) Hepatitis B virus of genotype B with or without recombination with genotype C over the precore region plus the core gene. J Virol 76: 5985-5992.
    • (2002) J Virol , vol.76 , pp. 5985-5992
    • Sugauchi, F.1    Orito, E.2    Ichida, T.3    Kato, H.4    Sakugawa, H.5


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