Mine, yours, ours? sharing data on human genetic variation

PLoS ONE

Volumn 7, Issue 6, 2012, Pages

  Milia, Nicola ^a,c   Congiu, Alessandra ^a,c   Anagnostou, Paolo ^a,b   Montinaro, Francesco ^b   Capocasa, Marco ^b   Sanna, Emanuele ^c   Bisol, Giovanni Destro ^a,b  

^a SAPIENZA UNIVERSITY OF ROME   (Italy)

^b Istituto Italiano di Antropologia   (Italy)

^c UNIVERSITY OF CAGLIARI   (Italy)

Author keywords

[No Author keywords available]

Indexed keywords

MITOCHONDRIAL DNA;

ACCESS TO INFORMATION; ARTICLE; DNA SEQUENCE; FORENSIC GENETICS; GENETIC DATABASE; GENETIC VARIABILITY; HUMAN GENETICS; INFORMATION PROCESSING; MEDICAL GENETICS; MEDLINE; MITOCHONDRION; MOLECULAR EVOLUTION; ONLINE SYSTEM; Y CHROMOSOME; GENETICS; HUMAN; INFORMATION DISSEMINATION;

DATABASES, GENETIC; GENETIC VARIATION; HUMANS; INFORMATION DISSEMINATION;

EID: 84861897528     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0037552     Document Type: Article

References (36)

1. Lang T, (2011) Advancing global health research through digital technology and sharing data. Science 331: 714-717 doi:10.1126/science.1199349.
2. King G, (2011) Ensuring the data-rich future of the social sciences. Science 331: 719-721 doi:10.1126/science.1197872.
3. Merton RK, (1942) Reprinted in The sociology of science: theoretical and empirical investigations. University of Chicago Press. 1972 pag 267-278.
4. Norman C, (1985) Sharing research data urged. Science 229: 632 doi:10.1126/science.229.4714.632.
5. Marshall E, (1990) Data sharing: a declining ethic? Science 248: 952-957.
6. DOE, Human Genome News, January 1993, 4.
7. Pennisi E, (2009) Data sharing. Group calls for rapid release of more genomics data. Science 324: 1000-1001 doi:10.1126/science.324_1000b.
8. International Strategy Meeting on Human Genome Sequencing, Bermuda, 25 to 28 February 1996; Human Genome Project Information website. 3 Available: www.ornl.gov/sci/techresources/Human_Genome/research/bermuda.shtml#1. Accessed 2012 January.
9. Piwowar HA, Chapman WW, (2008) Proceedings of the ELPUB 2008 Conference on Electronic Publishing. Toronto (ON), 25-27 June.
10. Sayers EW, Barrett T, Benson DA, Bolton E, Bryant SH, et al. (2011) Database resources of the National Center for Biotechnology Information. Nucleic Acids Res 39: D38-51 doi:10.1093/nar/gkq1172.
11. Piwowar HA, Vision TJ, Whitlock MC, (2011) Data archiving is a good investment. Nature 473: 285 doi:10.1038/473285a.
12. Fischer BA, Zigmond MJ, (2010) The essential nature of sharing in science. Sci Eng Ethics 16: 783-799 doi:10.1007/s11948-010-9239-x.
13. Piwowar HA, Day RS, Fridsma DB, (2007) Sharing detailed research data is associated with increased citation rate. PLoS ONE 2: e308 doi:10.1371/journal.pone.0000308.
14. Giffels J, (2010) Sharing data is a shared responsibility: Commentary on: «The essential nature of sharing in science». Sci Eng Ethics 16: 801-803 doi:10.1007/s11948-010-9230-6.
15. Nelson B, (2009) Data sharing: Empty archives. Nature 461: 160-163 doi:10.1038/461160a.
16. Murdoch C, Caulfield T, (2009) Commercialization, patenting and genomics: researcher perspectives. Genome Med 1: 22 doi:10.1186/gm22.
17. Tenopir C, Allard S, Douglass K, Aydinoglu AU, Wu L, et al. (2011) Data Sharing by Scientists: Practices and Perceptions. PLoS ONE 6 (6): e21101 doi:10.1371/journal.pone.0021101.
18. Savage CJ, Vickers AJ, (2009) Empirical study of data sharing by authors publishing in PLoS journals. PLoS ONE 4: e7078 doi:10.1371/journal.pone.0007078.
19. Alsheikh-Ali AA, Qureshi W, Al-Mallah MH, Ioannidis JPA, (2011) Public Availability of Published Research Data in High-Impact Journals. PLoS ONE 6 (9): e24357 doi:10.1371/journal.pone.0024357.
20. Peltonen L, (2001) The molecular dissection of human diseases after the human genome project. Pharmacogenomics J 1: 5-6.
21. Nelson MR, Bryc K, King KS, Indap A, Boyko AR, et al. (2008) The Population Reference Sample, POPRES: a resource for population, disease, and pharmacological genetics research. Am J Hum Genet 83: 347-358 doi:10.1016/j.ajhg.2008.08.005.
22. Campbell EG, Clarridge BR, Gokhale M, Birenbaum L, Hilgartner S, et al. (2002) Data withholding in academic genetics: evidence from a national survey. JAMA 287: 473-480.
23. Mishmar D, Zhidkov I, (2010) Evolution and disease converge in the mitochondrion. Biochim Biophys Acta 1797: 1099-1104 doi:10.1016/j.bbabio.2010.01.003.
24. King TE, Jobling MA, (2009) What's in a name? Y chromosomes, surnames and the genetic genealogy revolution. Trends Genet 25: 351-360 doi:10.1016/j.tig.2009.06.003.
25. Destro-Bisol G, Jobling MA, Rocha J, Novembre J, Richards MB, et al. (2010) Molecular anthropology in the genomic era. J Anthropol Sci 88: 93-112. Available athttp://www.isita-org.com/jass/Contents/2010vol88/PDFonline/Jass2010_08_Destro-Bisol.pdf.
26. Hoban S, Bertorelle G, Gaggiotti OE, (2012) Computer simulations: tools for population and evolutionary genetics. Nat Rev Genet 13: 110-122 doi:10.1038/nrg3130.
27. Tofanelli S, Taglioli L, Merlitti D, Paoli G, (2011) Tools which simulate the evolution of uni-parentally transmitted elements of the human genome. J Anthropol Sci. 2011;89:201-19. doi:10.4 436/jass.8 901.
28. Ntzani EE, Ioannidis JP, (2003) Predictive ability of DNA microarrays for cancer outcomes and correlates: an empirical assessment. The Lancet 362: 1439-1444 doi:16/S0140-6736(03)14686-7.
29. Noor MAF, Zimmerman KJ, Teeter KC, (2006) Data sharing: how much doesn't get submitted to GenBank? PLoS Biol 4: e228 doi:10.1371/journal.pbio.0040228.
30. Wicherts JM, Borsboom D, Kats J, Molenaar D, (2006) The poor availability of psychological research data for reanalysis. Am Psychol 61: 726-728 doi:10.1037/0003-066X.61.7.726.
31. Piwowar HA, Becich MJ, Bilofsky H, Crowley RS, (2008) Towards a data sharing culture: recommendations for leadership from academic health centers. PLoS Med 5: e183 doi:10.1371/journal.pmed.0050183.
32. Piwowar HA, (2011) Who Shares? Who Doesn't? Factors Associated with Openly Archiving Raw Research Data. PLoS ONE 6 (7): e18657 doi:10.1371/journal.pone.0018657.
33. Carracedo A, Butler JM, Gusmão L, Parson W, Roewer L, et al. (2010) Publication of population data for forensic purposes. Forensic Sci Int Genet 4 (3): 145-147 doi:10.1016/j.fsigen.2010.02.001.
34. Parson W, Roewer L, (2010) Publication of population data of linearly inherited DNA markers in the International Journal of Legal Medicine. Int J Legal Med 124 (5): 505-509 doi:10.1007/s00414-010-0492-y.
35. Parson W, Brandstätter A, Alonso A, Brandt N, Brinkmann B, et al. (2004) The EDNAP mitochondrial DNA population database (EMPOP) collaborative exercises: organisation, results and perspectives. Forensic Sci Int 139 (2-3): 215-226 doi:10.1016/j.forsciint.2003.11.008.
36. Willuweit S, Roewer L; International Forensic Y Chromosome User Group. (2007) Y chromosome haplotype reference database (YHRD): update. Forensic Sci Int Genet. 1 (2): 83-87 doi 10.1016/j.fsigen.2007.01.017.