First isolation and characterization of Chryseobacterium shigense from rainbow trout

BMC Veterinary Research

Volumn 8, Issue , 2012, Pages

  Zamora, Leydis ^a   Vela, Ana I ^a   Palacios, M Angel ^b   Domínguez, Lucas ^a   Fernández Garayzábal, José F ^a  

^a UNIVERSIDAD COMPLUTENSE DE MADRID   (Spain)

^b Grupo Piszolla   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

CHRYSEOBACTERIUM; CHRYSEOBACTERIUM SHIGENSE; ONCORHYNCHUS MYKISS; SALMONIDAE;

BACTERIAL RNA; RNA 16S;

ANIMAL; ANIMAL DISEASE; ARTICLE; CHRYSEOBACTERIUM; CLASSIFICATION; FISH DISEASE; FLAVOBACTERIACEAE INFECTION; GENETICS; GILL; ISOLATION AND PURIFICATION; KIDNEY; LIVER; MICROBIOLOGY; PHYLOGENY; RAINBOW TROUT;

ANIMALS; CHRYSEOBACTERIUM; FISH DISEASES; FLAVOBACTERIACEAE INFECTIONS; GILLS; KIDNEY; LIVER; ONCORHYNCHUS MYKISS; PHYLOGENY; RNA, BACTERIAL; RNA, RIBOSOMAL, 16S;

EID: 84861842296     PISSN: None     EISSN: 17466148     Source Type: Journal    
DOI: 10.1186/1746-6148-8-77     Document Type: Article

References (24)

1. Bernardet JF, Hugo C, Bruun B. The Genera Chryseobacterium and Elizabethkingia 2006, 638-676. Springer-Verlag, New York, Dworkin M, Falkow S, Rosenberg E, Schleifer KH, Stackebrandt E, Volume 7 3.
2. Chiu CH, Waddington M, Hsieh WS, Greenberg D, Schreckenberger PC, Carnahan AM. Atypical Chryseobacterium meningosepticum and meningitis and sepsis in newborns and the immunocompromised, Taiwan. Emerg Infect Dis 2000, 6:481-486. 10.3201/eid0605.000506, 2627967, 10998378.
3. Hsueh PR, Teng LJ, Yang PC, Ho SW, Hsieh WC, Luh KT. Increasing incidence of nosocomial Chryseobacterium indologenes infections in Taiwan. Eur50). J Clin Microbiol Infect Dis 1997, 16:568-574.
4. Bernardet JF, Vancanneyt M, Matte-Tailliez O, Grisez L, Tailliez P, Bizet C, Nowakowski M, Kerouault B, Swings J. Polyphasic study of Chryseobacterium strains isolated from diseased aquatic animals. Syst Appl Microbiol 2005, 28:640-660. 10.1016/j.syapm.2005.03.016, 16156122.
5. Mudarris M, Austin B. Systemic disease in turbot Scophthalmus maximus caused by a previously unrecognised Cytophaga-like bacterium. Dis Aquat Org 1989, 6:161-166.
6. Mudarris M, Austin B, Segers P, Vancanneyt M, Hoste B, Bernardet JF. Flavobacterium scophthalmum sp. nov., a pathogen of turbot (Scophthalmus maximus L.). Int J Syst Bacteriol 1994, 44:447-453. 10.1099/00207713-44-3-447, 8068540.
7. Ilardi P, Avendaño-Herrera R. Isolation of Flavobacterium-like bacteria from diseased salmonids cultured in Chile. Bull Eur Assoc Fish Pathol 2008, 28:176-185.
8. Ilardi P, Fernández J, Avendaño-Herrera R. Chryseobacterium piscicola sp. nov., isolated from diseased salmonid fish. Int J Syst Evol Microbiol 2009, 59:3001-3005. 10.1099/ijs.0.007021-0, 19643904.
9. Ilardi P, Abad J, Rintamäki P, Bernardet JF, Avendaño-Herrera R. Phenotypic, serological and molecular evidence of Chryseobacterium piscicola in farmed Atlantic salmon, Salmo salar L., in Finland. J Fish Dis 2010, 33:179-181. 10.1111/j.1365-2761.2009.01091.x, 19735345.
10. Campbell S, Harada RM, Li QX. Chryseobacterium arothri sp. nov., isolated from the kidneys of a pufferfish. Int J Syst Evol Microbiol 2008, 58:290-293. 10.1099/ijs.0.65276-0, 18175724.
11. Kämpfer P, Fallschissel K, Avendaño-Herrera R. Chryseobacterium chaponense sp. nov., isolated from farmed Atlantic salmon (Salmo salar). Int J Syst Evol Microbiol 2011, 61:497-501. 10.1099/ijs.0.022004-0, 20363929.
12. Wiklund T, Madsen L, Bruun MS, Dalsgaard I. Detection of Flavobacterium psychrophilum from fish tissue and water samples by PCR amplification. J Appl Microbiol 2000, 88:299-307. 10.1046/j.1365-2672.2000.00959.x, 10735999.
13. Vela AI, Collins MD, Lawson PA, García N, Domínguez L, Fernández-Garayzábal JF. Uruburuella suis gen. nov., sp. nov., isolated from clinical specimens of pigs. Int J Syst Evol Microbiol 2005, 55:643-647. 10.1099/ijs.0.63346-0, 15774637.
14. Saitou N, Nei M. The neighbour-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 1987, 4:406-425.
15. Marmur J. A procedure for the isolation of deoxyribonucleic acid from micro-organisms. J Mol Biol 1961, 3:208-218.
16. Bernardet JF, Nakagawa Y, Holmes B. Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family. Int J Syst Evol Microbiol 2002, 52:1049-1070. 10.1099/ijs.0.02136-0, 12054224.
17. Zamora L, Fernández-Garayzábal JF, Palacio MA, Sánchez-Porro C, Svensson-Stadler LA, Domínguez L, Moore ERB, Ventosa A, Vela A. Chryseobacterium oncorhynchi sp. nov., isolated from rainbow trout (Oncorhynchus mykiss). Syst Appl Microbiol 2011, 35:24-29.
18. Cipriano RC, Holt RA. Flavobacterium psychrophilum, cause of bacterial cold-water disease and rainbow trout fry syndrome. Fish Disease Leaflet 2005, 86:1-44.
19. Woo PCY, Lau SKP, Teng JLL, Tse H, Yuen KY. Then and now: use of 16 S rDNA gene sequencing for bacterial identification and discovery of novel bacteria in clinical microbiology laboratories. Clin Microbiol Infect 2008, 10:908-934.
20. Shimomura K, Kaji S, Hiraishi A. Chryseobacterium shigense sp. nov., a yellow-pigmented, aerobic bacterium isolated from a lactic acid beverage. Int J Syst Evol Microbiol 2005, 55:1903-1906. 10.1099/ijs.0.63690-0, 16166686.
21. Martín V, Vela AI, Gilbert M, Cebolla J, Goyache J, Domínguez L, Fernández-Garayzábal JF. Characterization of Aerococcus viridans isolates from swine clinical specimens. J Clin Microbiol 2007, 45:3053-3057. 10.1128/JCM.00156-07, 2045271, 17596355.
22. Georgiadis MP, Gardner IA, Hedrick RP. The role of epidemiology in the prevention, diagnosis, and control of infectious diseases of fish. Prev Vet Med 2001, 48:287-302. 10.1016/S0167-5877(00)00202-6, 11259821.
23. Bernardet JF, Segers P, Vancanneyt M, Berthe F, Kersters K, Vandamme P. Cutting a Gordian knot: emended classification and description of the genus Flavobacterium, emended description of the family Flavobacteriaceae, and proposal of Flavobacterium hydatis nom. nov. (Basonym, Cytophaga aquatilis Strohl and Tait 1978). Int J Syst Bacteriol 1996, 46:128-148.
24. Hesami S, Allen KJ, Metcalf D, Ostland VE, MacInnes JI, Lumsden JS. Phenotypic and genotypic analysis of Flavobacterium psychrophilum isolates from Ontario salmonids with bacterial coldwater disease. Can J Microbiol 2008, 54:619-629. 10.1139/W08-058, 18772924.