Isolation, cloning and in silico study of hexon gene of fowl adenovirus 4 (FAV4) isolates associated with hydro pericardium syndrome in domestic fowl

Journal of Proteomics and Bioinformatics

Volumn 4, Issue 9, 2011, Pages 190-195

  Asthana, Manu ^a   Singh, Vinay Kumar ^a   Kumar, Rajesh ^b   Chandra, Rajesh ^b  

^a Dept of Molecular Biology and Genetic Engineering ^*  (India)

^b G B PANT UNIVERSITY OF AGRICULTURE AND TECHNOLOGY   (India)

Author keywords

[No Author keywords available]

Indexed keywords

EPITOPE;

ADENOVIRUS; AMINO ACID SEQUENCE; ANIMAL CELL; ANIMAL EXPERIMENT; ANIMAL MODEL; ARTICLE; COMPUTER MODEL; DOMESTIC FOWL; EMBRYO; FOWL ADENOVIRUS 4; GENE; GENE AMPLIFICATION; GENE ISOLATION; HEART DISEASE; HEXON GENE; HYDROPERICARDIUM SYNDROME; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; POLYMERASE CHAIN REACTION; PROTEIN SECONDARY STRUCTURE; SEQUENCE HOMOLOGY; SEROTYPE; VIRUS ISOLATION;

ADENOVIRIDAE; FOWL ADENOVIRUS 4;

EID: 84861788257     PISSN: None     EISSN: 0974276X     Source Type: Journal    
DOI: 10.4172/jpb.1000189     Document Type: Article

References (18)

1. Adair BM, Curran WL, McFerran JB (1979) Ultra structural studies of the replication of fowl adenoviruses in primary cell cultures. Avian Pathol 8: 133-144.
2. Barua S, Rai A (2004) Restriction enzyme analysis of fowl adenovirus 4 DNA. J Immunol Immunopathol 6: 59-63.
3. Chandra R, Shukla SK, Kumar M, Garg SK (1997) Electron microscopic demonstration of an adenovirus in the hepatocytes of birds experimentally infected with hydropericardium syndrome. Vet Rec 140: 70-71.
4. Crawford-Miksza L, Schnurr DP (1996) Analysis of adenovirus hexon proteins reveals the location and structure of seven hypervariable regions containing serotype-specific residues. J Virol 70: 1836-1844.
5. Doytchinova IA and Flower DR (2007) VaxiJen: a server for prediction of protective antigens, tumour antigens and subunit vaccines. BMC Bioinformatics 8: 1-7.
6. Erny KM, Pallister J, Sheppard M (1995) Immunological and molecular comparison of fowl adenovirus serotypes 4 and 10. Arch Virol 140: 491-501.
7. Finn RD, Mistry J, Schuster-Bockler B, Griffiths-Jones S, Hollich V, et al. (2006) Pfam: clans, web tools and services. Nucleic Acids Res 34: D247-D251.
8. Gasteiger E, Hoogland C, Gattiker A, Duraud S, Wilkins MR, et al. (2005) Protein Identification and Analysis Tools on the ExPAsy Server, in: John, M. Walker (Eds.), The Proteomics Protocols Handbook. Humana Press 571-607.
9. Hasan SA (1989) Pakistan is mystified hydropericardium syndrome. Poultry Misset 5: 35-36.
10. Jaffery MS (1988) A treatise on Angara disease (hydropericardium-pulmonaryoedema-hepatonephritis syndrome). Pakistan Vet Medical Association 34.
11. Kataria JM, Sah RL, Verma KC, Bansal MP (1995). Studies on inclusion body hepatitis in chickens. Presented in: National Symposium on impact of disease on Livestock/poultry production and wildlife conservation. IAVP, Orissa Vety. College, Bhubaneswar, 9-11 Nov. 1995. pp: 75.
12. Pichla-Gollon LS, Drinker M, Zhou X, Xue F, Rux JJ, et al. (2007) Structure based identifcation of a major neutralizing site in an adenovirus hexon. J Virol 81: 1680-1689.
13. Pruitt KD, Tatusova T, Maglott DR (2007) NCBI reference sequences (RefSeq): a curated non redundant sequence database of genomes, transcripts and proteins. Nucleic Acids Res 35: D61-D65.
14. Russel WC, Adrian T, Bartha A, Fujinga K, Ginsberg HS, et al. (1995) Adenoviridae In: Murphy FA, Faquet CH, Bishop DHL, Ghabrial SA, Jarvis AW, Martelli GP, Mayo HS, Summers HD (eds) Virus Taxonomy classification and nomenclature of viruses. Sixth Report of the International Committee on Taxonomy of viruses. Springer, Wien Newyork, 128-133.
15. Saha S, Raghava GP (2006) Prediction of Continuous B-cell Epitopes in an Antigen Using Recurrent Neural Network. Proteins 65: 40-48.
16. Sreenivas Gowda RN, Satyanarayana ML (1994) Hydropericardium Syndrome in poultry. Indian J Vet Pathol 18: 159-161.
17. Tamura K, Dudley J, Nei M & Kumar S (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 24:1596-1599.
18. Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.