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Volumn 7, Issue 5, 2012, Pages

Crystal structure of a complex of DNA with one AT-hook of HMGA1

Author keywords

[No Author keywords available]

Indexed keywords

AMINE; CYSTEINYLGLYCYLALANYLALANYLTHREONYLTHREONYLALANYLALANYLTHREONYLTHREONYLCYSTEINYLGLYCINE; DNA; HIGH MOBILITY GROUP A1A PROTEIN; OLIGONUCLEOTIDE; UNCLASSIFIED DRUG;

EID: 84861208653     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0037120     Document Type: Article
Times cited : (53)

References (25)
  • 1
    • 0025196283 scopus 로고
    • The A.T-DNA-binding domain of mammalian high mobility group I chromosomal proteins. A novel peptide motif for recognizing DNA structure
    • Reeves R, Nissen MS, (1990) The A.T-DNA-binding domain of mammalian high mobility group I chromosomal proteins. A novel peptide motif for recognizing DNA structure. J Biol Chem 265: 8573-8582.
    • (1990) J Biol Chem , vol.265 , pp. 8573-8582
    • Reeves, R.1    Nissen, M.S.2
  • 2
    • 0035904395 scopus 로고    scopus 로고
    • Molecular biology of HMGA proteins: hubs of nuclear function
    • Reeves R, (2001) Molecular biology of HMGA proteins: hubs of nuclear function. Gene 277: 63-81.
    • (2001) Gene , vol.277 , pp. 63-81
    • Reeves, R.1
  • 3
    • 74449090463 scopus 로고    scopus 로고
    • HMGA molecular network: From transcriptional regulation to chromatin remodeling
    • Sgarra R, Zammitti S, Lo Sardo A, Maurizio E, Arnoldo L, et al. (2010) HMGA molecular network: From transcriptional regulation to chromatin remodeling. Biochim Biophys Acta 1799: 37-47.
    • (2010) Biochim Biophys Acta , vol.1799 , pp. 37-47
    • Sgarra, R.1    Zammitti, S.2    Lo Sardo, A.3    Maurizio, E.4    Arnoldo, L.5
  • 4
    • 38849089984 scopus 로고    scopus 로고
    • The HMGA proteins: a myriad of functions (Review)
    • Cleynen I, Van de Ven WJ, (2008) The HMGA proteins: a myriad of functions (Review). Int J Oncol 32: 289-305.
    • (2008) Int J Oncol , vol.32 , pp. 289-305
    • Cleynen, I.1    van de Ven, W.J.2
  • 5
    • 22544482628 scopus 로고    scopus 로고
    • Lack of the architectural factor HMGA1 causes insulin resistance and diabetes in humans and mice
    • Foti D, Chiefari E, Fedele M, Iuliano R, Brunetti L, et al. (2005) Lack of the architectural factor HMGA1 causes insulin resistance and diabetes in humans and mice. Nat Med 11: 765-773.
    • (2005) Nat Med , vol.11 , pp. 765-773
    • Foti, D.1    Chiefari, E.2    Fedele, M.3    Iuliano, R.4    Brunetti, L.5
  • 6
    • 33846804545 scopus 로고    scopus 로고
    • HMG chromosomal proteins in development and disease
    • Hock R, Furusawa T, Ueda T, Bustin M, (2007) HMG chromosomal proteins in development and disease. Trends Cell Biol 17: 72-79.
    • (2007) Trends Cell Biol , vol.17 , pp. 72-79
    • Hock, R.1    Furusawa, T.2    Ueda, T.3    Bustin, M.4
  • 7
    • 36448992338 scopus 로고    scopus 로고
    • Roles of HMGA proteins in cancer
    • Fusco A, Fedele M, (2007) Roles of HMGA proteins in cancer. Nat Rev Cancer 7: 899-910.
    • (2007) Nat Rev Cancer , vol.7 , pp. 899-910
    • Fusco, A.1    Fedele, M.2
  • 8
    • 0642378415 scopus 로고    scopus 로고
    • HMGA proteins as therapeutic drug targets
    • Reeves R, Beckerbauer LM, (2003) HMGA proteins as therapeutic drug targets. Prog Cell Cycle Res 5: 279-286.
    • (2003) Prog Cell Cycle Res , vol.5 , pp. 279-286
    • Reeves, R.1    Beckerbauer, L.M.2
  • 9
    • 0028303273 scopus 로고
    • Short peptide fragments derived from HMG-I/Y proteins bind specifically to the minor groove of DNA
    • Geierstanger BH, Volkman BF, Kremer W, Wemmer DE, (1994) Short peptide fragments derived from HMG-I/Y proteins bind specifically to the minor groove of DNA. Biochemistry 33: 5347-5355.
    • (1994) Biochemistry , vol.33 , pp. 5347-5355
    • Geierstanger, B.H.1    Volkman, B.F.2    Kremer, W.3    Wemmer, D.E.4
  • 10
    • 0030764158 scopus 로고    scopus 로고
    • The solution structure of an HMG-I(Y)-DNA complex defines a new architectural minor groove binding motif
    • Huth JR, Bewley CA, Nissen MS, Evans JN, Reeves R, et al. (1997) The solution structure of an HMG-I(Y)-DNA complex defines a new architectural minor groove binding motif. Nat Struct Biol 4: 657-665.
    • (1997) Nat Struct Biol , vol.4 , pp. 657-665
    • Huth, J.R.1    Bewley, C.A.2    Nissen, M.S.3    Evans, J.N.4    Reeves, R.5
  • 11
    • 0037459241 scopus 로고    scopus 로고
    • The energetics of specific binding of AT-hooks from HMGA1 to target DNA
    • Dragan AI, Liggins JR, Crane-Robinson C, Privalov PL, (2003) The energetics of specific binding of AT-hooks from HMGA1 to target DNA. J Mol Biol 327: 393-411.
    • (2003) J Mol Biol , vol.327 , pp. 393-411
    • Dragan, A.I.1    Liggins, J.R.2    Crane-Robinson, C.3    Privalov, P.L.4
  • 12
    • 77749304818 scopus 로고    scopus 로고
    • DNA Bending by the Mammalian High-Mobility Group Protein AT Hook 2
    • Chen B, Young J, Leng F, (2010) DNA Bending by the Mammalian High-Mobility Group Protein AT Hook 2. Biochemistry 49: 1590-1595.
    • (2010) Biochemistry , vol.49 , pp. 1590-1595
    • Chen, B.1    Young, J.2    Leng, F.3
  • 13
    • 0019843568 scopus 로고
    • Structure of a B-DNA dodecamer. III. Geometry of hydration
    • Drew HR, Dickerson RE, (1981) Structure of a B-DNA dodecamer. III. Geometry of hydration. J Mol Biol 151: 535-556.
    • (1981) J Mol Biol , vol.151 , pp. 535-556
    • Drew, H.R.1    Dickerson, R.E.2
  • 16
    • 36048957227 scopus 로고    scopus 로고
    • Specific recognition of AT-rich DNA sequences by the mammalian high mobility group protein AT-hook 2: a SELEX study
    • Cui T, Leng F, (2007) Specific recognition of AT-rich DNA sequences by the mammalian high mobility group protein AT-hook 2: a SELEX study. Biochemistry 46: 13059-13066.
    • (2007) Biochemistry , vol.46 , pp. 13059-13066
    • Cui, T.1    Leng, F.2
  • 17
    • 71049141339 scopus 로고    scopus 로고
    • HMGA1a recognition candidate DNA sequences in humans
    • Manabe T, Katayama T, Tohyama M, (2009) HMGA1a recognition candidate DNA sequences in humans. PLoS One 4: e8004.
    • (2009) PLoS One , vol.4
    • Manabe, T.1    Katayama, T.2    Tohyama, M.3
  • 18
    • 0031830815 scopus 로고    scopus 로고
    • Minor groove-binding architectural proteins: structure, function, and DNA recognition
    • Bewley CA, Gronenborn AM, Clore GM, (1998) Minor groove-binding architectural proteins: structure, function, and DNA recognition. Annu Rev Biophys Biomol Struct 27: 105-131.
    • (1998) Annu Rev Biophys Biomol Struct , vol.27 , pp. 105-131
    • Bewley, C.A.1    Gronenborn, A.M.2    Clore, G.M.3
  • 19
    • 74549129403 scopus 로고    scopus 로고
    • HMG modifications and nuclear function
    • Zhang Q, Wang Y, (2010) HMG modifications and nuclear function. Biochim Biophys Acta 1799: 28-36.
    • (2010) Biochim Biophys Acta , vol.1799 , pp. 28-36
    • Zhang, Q.1    Wang, Y.2
  • 20
    • 0037378828 scopus 로고    scopus 로고
    • During apoptosis of tumor cells HMGA1a protein undegoes methylation: Identification of the modification site by mass spectrometry
    • Sgarra R, Diana F, Bellarosa C, Deklva V, Rustighi A, et al. (2003) During apoptosis of tumor cells HMGA1a protein undegoes methylation: Identification of the modification site by mass spectrometry. Biochemistry 42: 3575-3585.
    • (2003) Biochemistry , vol.42 , pp. 3575-3585
    • Sgarra, R.1    Diana, F.2    Bellarosa, C.3    Deklva, V.4    Rustighi, A.5
  • 21
    • 0031059866 scopus 로고    scopus 로고
    • Processing of X-ray Diffraction Data Collected in Oscillation Mode
    • Otwinowsky Z, Minor W, (1997) Processing of X-ray Diffraction Data Collected in Oscillation Mode. Methods Enzymol 276: 307-326.
    • (1997) Methods Enzymol , vol.276 , pp. 307-326
    • Otwinowsky, Z.1    Minor, W.2
  • 22
    • 84920325457 scopus 로고
    • AMoRe: an automated package for molecular replacement
    • Navaza J, (1994) AMoRe: an automated package for molecular replacement. Acta Crystallographica Section A 50: 157-163.
    • (1994) Acta Crystallographica Section A , vol.50 , pp. 157-163
    • Navaza, J.1
  • 24
    • 0242396923 scopus 로고    scopus 로고
    • 3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures
    • Lu XJ, Olson WK, (2003) 3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures. Nucleic Acids Res 31: 5108-5121.
    • (2003) Nucleic Acids Res , vol.31 , pp. 5108-5121
    • Lu, X.J.1    Olson, W.K.2
  • 25
    • 0020359857 scopus 로고
    • Reversible bending and helix geometry in a B-DNA dodecamer: CGCGAATTBrCGCG
    • Fratini AV, Kopka ML, Drew HR, Dickerson RE, (1982) Reversible bending and helix geometry in a B-DNA dodecamer: CGCGAATTBrCGCG. J Biol Chem 257: 14686-14707.
    • (1982) J Biol Chem , vol.257 , pp. 14686-14707
    • Fratini, A.V.1    Kopka, M.L.2    Drew, H.R.3    Dickerson, R.E.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.