MageComet-web application for harmonizing existing large-scale experiment descriptions

Bioinformatics

Volumn 28, Issue 10, 2012, Pages 1402-1403

  Xue, Vincent ^a   Burdett, Tony ^b   Lukk, Margus ^c   Taylor, Julie ^b   Brazma, Alvis ^b   Parkinson, Helen ^b  

^a City College of New York   (United States)

^b WELLCOME TRUST SANGER INSTITUTE   (United Kingdom)

^c CANCER RESEARCH UK CAMBRIDGE RESEARCH INSTITUTE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

TRANSCRIPTOME;

ARTICLE; DATA MINING; GENETIC DATABASE; INTERNET; META ANALYSIS (TOPIC); MOLECULAR GENETICS;

DATA MINING; DATABASES, GENETIC; INTERNET; META-ANALYSIS AS TOPIC; MOLECULAR SEQUENCE ANNOTATION; TRANSCRIPTOME;

EID: 84861141652     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/bts148     Document Type: Article

References (5)

1. Adamusiak,T. et al. (2011) OntoCAT-simple ontology search and integration in Java, R and REST/JavaScript. BMC Bioinformatics, 12, 218.
2. Hampton,T. (2006) Cancer Genome Atlas. J. Am. Med. Assoc., 296, 1958-1958.
3. Malone,J. et al. (2010) Modeling sample variables with an Experimental Factor Ontology. Bioinformatics, 26, 1112.
4. Parkinson,H. et al. (2009) ArrayExpress update-from an archive of functional genomics experiments to the atlas of gene expression. Nucleic Acids Res., 37, D868-D872.
5. Rayner,T.F. et al. (2006) A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB. BMC Bioinformatics, 7, 489.