Characterization of extended-spectrum β-lactamase genes found among Escherichia coli isolates from duck and environmental samples obtained on a duck farm

Applied and Environmental Microbiology

Volumn 78, Issue 10, 2012, Pages 3668-3673

  Ma, Junying ^a,b   Liu, Jian Hua ^a   Lv, Luchao ^a   Zong, Zhiyong ^c   Sun, Yan ^a   Zheng, Hongqing ^a   Chen, Zhang Liu ^a   Zeng, Zhen Ling ^a  

^a SOUTH CHINA AGRICULTURAL UNIVERSITY   (China)

^b SOUTH CHINA SEA INSTITUTE OF OCEANOLOGY   (China)

^c SICHUAN UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

AGAR PLATES; ANTIBIOTIC RESISTANCE GENES; E. COLI; ENVIRONMENTAL SAMPLE; FECAL SAMPLES; GENETIC BACKGROUNDS; GENETIC RELATEDNESS; HORIZONTAL TRANSFER; HYPOTHETICAL PROTEIN; LACTAMASES; MOBILE ELEMENTS; POND WATER; SOUTH CHINA; WATER SAMPLES;

DNA; ESCHERICHIA COLI; FARMS; GENES;

RIVERS;

ANTIINFECTIVE AGENT; BACTERIAL DNA; BETA LACTAM; BETA LACTAMASE;

ANTIBIOTIC RESISTANCE; COLIFORM BACTERIUM; CULTIVATION; ENZYME ACTIVITY; GENE; PLASMID; POND; RELATEDNESS; SAMPLING; WATERFOWL;

ANIMAL; ANTIBIOTIC RESISTANCE; ARTICLE; BACTERIAL GENE; CHEMISTRY; CHINA; CLASSIFICATION; DNA SEQUENCE; DUCK; ENZYMOLOGY; ESCHERICHIA COLI; FECES; GENETICS; ISOLATION AND PURIFICATION; MICROBIOLOGICAL EXAMINATION; MICROBIOLOGY; MOLECULAR GENETICS; MOLECULAR TYPING; NUCLEOTIDE SEQUENCE; PLASMID; SECRETION; TRANSPOSON;

ANIMALS; ANTI-BACTERIAL AGENTS; BETA-LACTAM RESISTANCE; BETA-LACTAMASES; BETA-LACTAMS; CHINA; DNA TRANSPOSABLE ELEMENTS; DNA, BACTERIAL; DUCKS; ENVIRONMENTAL MICROBIOLOGY; ESCHERICHIA COLI; FECES; GENES, BACTERIAL; MICROBIAL SENSITIVITY TESTS; MOLECULAR SEQUENCE DATA; MOLECULAR TYPING; PLASMIDS; SEQUENCE ANALYSIS, DNA;

CHINA;

ANAS; ESCHERICHIA COLI;

EID: 84861138474     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.07507-11     Document Type: Article

References (33)

1. Bonnet R, et al. 2003. Effect of D240G substitution in a novel ESBL CTX-M-27. J. Antimicrob. Chemother. 52:29-35.
2. Carattoli A, et al. 2005. Identification of plasmids by PCR-based replicon typing. J. Microbiol. Methods 63:219-228.
3. Clermont O, Bonacorsi S, Bingen E. 2000. Rapid and simple determination of the Escherichia coli phylogenetic group. Appl. Environ. Microbiol. 66:4555-4558.
4. Clinical and Laboratory Standards Institute. 2008. Performance standards for antimicrobial disk susceptibility tests for bacteria isolated from animals. Approved standard, 3rd ed. Document M31-A3. CLSI, Wayne, PA.
5. Clinical and Laboratory Standards Institute. 2010. Performance standards for antimicrobial susceptibility testing, 20th informational supplement. M100-S20. CLSI, Wayne, PA.
6. Costa D, et al. 2009. Prevalence of extended-spectrum β-lactamaseproducing Escherichia coli isolates in faecal samples of broilers. Vet. Microbiol. 138:339-344.
7. CTX-M genes in different plasmids from German clinical Escherichia coli isolates. J. Med. Microbiol. 59:580-587.
8. Dhanji H, et al. 2011. Isolation of fluoroquinolone-resistant O25b:H4-ST131 Escherichia coli with CTX-M-14 extended-spectrum β-lactamase from UK river water. J. Antimicrob. Chemother. 66:512-516.
9. Dolejská M, Bierosová B, Kohoutová L, Literák I, Cízek A. 2009. Antibiotic-resistant Salmonella and Escherichia coli isolates with integrons and extended-spectrum β-lactamases in surface water and sympatric black-headed gulls. J. Appl. Microbiol. 106:1941-1950.
10. García-Fernández A, et al. 2011. Multilocus sequence typing of IncN plasmids. J. Antimicrob. Chemother. 66:1987-1991.
11. Gautom RK. 1997. Rapid pulsed-field gel electrophoresis protocol for typing of Escherichia coli O157:H7 and other gram-negative organisms in 1 day. J. Clin. Microbiol. 35:2977-2980.
12. Ghosh S, LaPara TM. 2007. The effects of subtherapeutic antibiotic use in farm animals on the proliferation and persistence of antibiotic resistance among soil bacteria. ISME J. 1:191-203.
13. Gonçalves A, et al. 2010. Genetic characterization of extended-spectrum β-lactamases in Escherichia coli isolates of pigs from a Portuguese intensive swine farm. Foodborne Pathog. Dis. 7:1569-1573.
14. Ho PL, et al. 2011. Extensive dissemination of CTX-M-producing Escherichia coli with multidrug resistance to 'critically important' antibiotics among food animals in Hong Kong, 2008-10. J. Antimicrob. Chemother. 66:765-768.
15. Horton RA, et al. 2011. Fecal carriage and shedding density of CTX-M extended-spectrum β-lactamase-producing Escherichia coli in cattle, chickens, and pigs: implications for environmental contamination and food production. Appl. Environ. Microbiol. 77:3715-3719.
16. Ishii S, Sadowsky MJ. 2008. Escherichia coli in the environment: implications for water quality and human health. Microbes Environ. 23:101-108.
17. Izumiya H, et al. 2005. Identification of CTX-M-14 β-lactamase in a Salmonella enterica serovar enteritidis isolate from Japan. Antimicrob. Agents Chemother. 49:2568-2570.
18. Kariyawasam S, Johnson TJ, Nolan LK. 2006. Unique DNA sequences of avian pathogenic Escherichia coli isolates as determined by genomic suppression subtractive hybridization. FEMS Microbiol. Lett. 262:193-200.
19. Li B, et al. 2011. High prevalence of CTX-M β-lactamases in faecal Escherichia coli strains from healthy humans in Fuzhou, China. Scand. J. Infect. Dis. 43:170-174.
20. Liu JH, et al. 2007. Detection and characterisation of CTX-M and CMY-2 β-lactamases among Escherichia coli isolates from farm animals in Guangdong Province of China. Int. J. Antimicrob. Agents 29:576-581.
21. Lu SY, et al. 2010. High diversity of extended-spectrum β-lactamaseproducing bacteria in an urban river sediment habitat. Appl. Environ. Microbiol. 76:5972-5976.
22. Martinez JL. 2009. Environmental pollution by antibiotics and by antibiotic resistance determinants. Environ. Pollut. 157:2893-2902.
23. Pitout JD, Laupland KB. 2008. Extended-spectrum β-lactamaseproducing Enterobacteriaceae: an emerging public-health concern. Lancet Infect. Dis. 8:159-166.
24. CTX-M β-lactamase gene. Antimicrob. Agents Chemother. 47:2938-2945.
25. Scott TM, Rose JB, Jenkins TM, Farrah SR, Lukasik J. 2002. Microbial source tracking: current methodology and future directions. Appl. Environ. Microbiol. 68:5796-5803.
26. CTX-M-24 from Klebsiella pneumoniae. J. Antimicrob. Chemother. 62:1252-1256.
27. Skurnik D, et al. 2006. Effect of human vicinity on antimicrobial resistance and integrons in animal faecal Escherichia coli. J. Antimicrob. Chemother. 57:1215-1219.
28. Smet A, et al. 2010. Broad-spectrum beta-lactamases among Enterobacteriaceae of animal origin: molecular aspects, mobility and impact on public health. FEMS Microbiol. Rev. 34:295-316.
29. CTX-M extended-spectrum β-lactamase genes in Escherichia coli isolates from pets and emergence of CTXM-64 in China. Clin. Microbiol. Infect. 16:1475-1481.
30. Tenover FC, et al. 1995. Interpreting chromosomal DNA restriction patterns produced by pulsed-field gel electrophoresis: criteria for bacterial strain typing. J. Clin. Microbiol. 33:2233-2239.
31. Villa L, García-Fernández A, Fortini D, Carattoli A. 2010. Replicon sequence typing of IncF plasmids carrying virulence and resistance determinants. J. Antimicrob. Chemother. 65:2518-2529.
32. Zhong CY, et al. 2009. Antibiotic susceptibility of Riemerella anatipestifer field isolates. Avian Dis. 53:601-607.
33. CTX-M-65 is carried by a Tn1722-like element on an IncN conjugative plasmid of ST131 Escherichia coli. J. Med. Microbiol. 60:435-441.