High-throughput cryopreservation of plant cell cultures for functional genomics

Plant and Cell Physiology

Volumn 53, Issue 5, 2012, Pages 943-952

  Ogawa, Yoichi ^a,d   Sakurai, Nozomu ^a   Oikawa, Akira ^b,e   Kai, Kosuke ^b,f   Morishita, Yoshihiko ^a   Mori, Kumiko ^a   Moriya, Kanami ^a   Fujii, Fumiko ^a   Aoki, Koh ^a,b   Suzuki, Hideyuki ^a   Ohta, Daisaku ^b   Saito, Kazuki ^a,c   Shibata, Daisuke ^a  

^a KAZUSA DNA RESEARCH INSTITUTE   (Japan)

^b Osaka Prefecture University   (Japan)

^c CHIBA UNIVERSITY   (Japan)

^d Honda Research Institute Japan   (Japan)

^e YAMAGATA UNIVERSITY   (Japan)

^f SYSMEX CORPORATION   (Japan)

Author keywords

Arabidopsis thaliana; Cryopreservation; Functional genomics; High throughput; Suspension cultured cells; Tobacco BY 2

Indexed keywords

BETA GLUCURONIDASE; CRYOPROTECTIVE AGENT; PROLINE;

ARABIDOPSIS; ARTICLE; CELL LINE; CELL SURVIVAL; CRYOPRESERVATION; CULTURE TECHNIQUE; CYTOLOGY; DRUG EFFECT; FREEZING; GENE EXPRESSION REGULATION; GENETICS; GENOMICS; HIGH THROUGHPUT SCREENING; METABOLISM; METHODOLOGY; PHYSIOLOGY; PLANT CELL;

ARABIDOPSIS; CELL CULTURE TECHNIQUES; CELL LINE; CELL SURVIVAL; CRYOPRESERVATION; CRYOPROTECTIVE AGENTS; FREEZING; GENE EXPRESSION REGULATION, PLANT; GENOMICS; GLUCURONIDASE; HIGH-THROUGHPUT SCREENING ASSAYS; PLANT CELLS; PROLINE;

ARABIDOPSIS; ARABIDOPSIS THALIANA; DAUCUS CAROTA; LOTUS CORNICULATUS VAR. JAPONICUS; NICOTIANA TABACUM; ORYZA SATIVA;

EID: 84861018286     PISSN: 00320781     EISSN: 14719053     Source Type: Journal    
DOI: 10.1093/pcp/pcs038     Document Type: Article

References (36)

1. Axelos, M., Curie, C., Mazzolini, L., Bardet, C. and Lescure, B. (1992) A protocol for transient gene expression in Arabidopsis thaliana protoplasts isolated from cell suspension culture. Plant Physiol. Biochem. 30: 123-128.
2. Benson, E.E. and Noronha-Dutra, A.A. (1988) Chemiluminescence in cryopreserved plant tissue culture: the possible involvement of singlet oxygen in cryoinjury. CryoLetters 9: 120-137.
3. Callard, D., Axelos, M. and Mazzolini, L. (1996) Novel molecular markers for late phases of the growth cycle of Arabidopsis thaliana cell-suspension cultures are expressed during organ senescence. Plant Physiol. 112: 705-715.
4. Fabre, J. and Dereuddre, J. (1990) Encapsulation-dehydration: a new approach to cryopreservation of Solanum shoot tips. CryoLetters 11: 413-426.
5. Harding, K. (2004) Genetic integrity of cryopreserved plant cells: a review. CryoLetters 25: 3-22. (Pubitemid 38377547)
6. Hayakawa, T., Kamachi, K., Oikawa, M., Ojima, K. and Yamaya, T. (1990) Response of glutamine synthetase and glutamate synthase isoforms to nitrogen sources in rice cell cultures. Plant Cell Physiol. 31: 1071-1077.
7. Hood, E.E., Helmer, G.L., Frakey, R.T. and Chilton, M.-D. (1986) The hypervirulence of Agrobacterium tumefaciens A281 is encoded in a region of pTiBo542 outside of T-DNA. J. Bacteriol. 168: 1291-1301. (Pubitemid 17226817)
8. Ishikawa, M., Robertson, A.J. and Gusta, L.V. (1995) Comparison of viability tests for assessing cross-adaptation to freezing, heat and salt stresses induced by abscisic acid in bromegrass (Bromus inermis Leyss) suspension cultured cells. Plant Sci. 107: 83-93.
9. Jefferson, R.A. (1987) Assaying chimeric genes in plants: The GUS gene fusion system. Methods Enzymol. 5: 387-405.
10. Jonsson, P., Gullberg, J., Nordström, A., Kusano, M., Kowalczyk, M., Sjöström, M. et al. (2004) A strategy for identifying differences in large series of metabolomic samples analyzed by GC/MS. Anal. Chem. 76: 1738-1745. (Pubitemid 38338423)
11. Kobayashi, T., Niino, T. and Kobayashi, M. (2005) Simple cryopreservation protocol with an encapsulation technique for tobacco BY-2 suspension cell cultures. Plant Biotechnol. 22: 105-115.
12. Kuriyama, A., Watanabe, K., Ueno, S. and Mitsuda, H. (1990) Effect of post-thaw treatment on the viability of cryopreserved Lavandula vera cells. CryoLetters 11: 171-178.
13. Langis, R., Schnabel, B., Earle, E.D. and Steponkus, P.L. (1989) Cryopreservation of Brassica campestris L. cell suspensions by vitrification. CryoLetters 10: 421-428.
14. Lowe, K.C., Anthony, P., Davey, M.R. and Power, J.B. (2001) Beneficial effects of Pluronic F-68 and artificial oxygen carriers of the post-thaw recovery of cryopreserved plant cells. Artif. Cells Blood Substit. Immobil. Biotechnol. 29: 297-316. (Pubitemid 32706223)
15. Mathur, J., Szabados, L., Schaefer, S., Grunenberg, B., Lossow, A., Jonas-Straube, E. et al. (1998) Gene identification with sequenced T-DNA tags generated by transformation of Arabidopsis cell suspensions. Plant J. 13: 707-716. (Pubitemid 28178497)
16. Matsumoto, T., Sakai, A., Takahashi, C. and Yamada, K. (1995) Cryopreservation in vitro-grown apical meristems of wasabi (Wasabi japonica) by encapsulation-vitrification method. CryoLetters 16: 189-196.
17. Menges, M. and Murray, A.H. (2004) Cryopreservation of transformed and wild-type Arabidopsis and tobacco cell suspension cultures. Plant J. 37: 635-644. (Pubitemid 38258783)
18. Mitsukawa, N., Okumura, S., Shirano, Y., Sato, S., Kato, T., Harashima, S. et al. (1997) Overexpression of an Arabidopsis thaliana high-affinity phosphate transporter gene in tobacco cultured cells enhances cell growth under phosphate-limited conditions. Proc. Natl Acad. Sci. USA 94: 7098-7102. (Pubitemid 27281997)
19. Nagata, T., Nemoto, Y. and Hasegawa, S. (1992) Tobacco BY-2 cell line as the 'HeLa' cell in the cell biology of higher plant. Int. Rev. Cytol. 132: 1-30.
20. Nakamura, Y., Kimura, A., Saga, H., Oikawa, A., Shinbo, Y., Kai, K. et al. (2007) Differential metabolomics unraveling light/dark regulation of metabolic activities in Arabidopsis cell culture. Planta 227: 57-66. (Pubitemid 350222824)
21. Nitzsche, W. (1980) One year storage of dried carrot callus. Z. Pflanzenphysiol. 100: 269-271.
22. Ogawa, Y., Dansako, T., Yano, K., Sakurai, N., Suzuki, H., Aoki, K. et al. (2008a) Efficient and high-throughput vector construction and Agrobacterium-mediated transformation of Arabidopsis thaliana suspension-cultured cells for functional genomics. Plant Cell Physiol. 49: 242-250. (Pubitemid 351231589)
23. Ogawa, Y., Suzuki, H., Sakurai, N., Aoki, K., Saito, K. and Shibata, D. (2008b) Cryopreservation and metabolic profiling analysis of Arabidopsis T87 suspension-cultured cells. CryoLetters 29: 427-436.
24. Ohta, S., Mita, S., Hattori, T. and Nakamura, K. (1990) Construction and expression in tobacco of a b-glucuronidase (GUS) reporter gene containing an intron within the coding sequence. Plant Cell Physiol. 31: 805-813.
25. Oikawa, A., Nakamura, Y., Ogura, T., Kimura, A., Suzuki, H., Sakurai, N. et al. (2006) Clarification of pathway-specific inhibition by fourier transformation ion cyclotron resonance/mass spectrometry-based metabolic phenotyping studies. Plant Physiol. 142: 398-413. (Pubitemid 44583115)
26. Quatrano, R.S. (1968) Freeze-preservation of cultured flax cells utilizing dimethylsulfoxide. Plant Physiol. 43: 2057-2061.
27. Reinhoud, P.J., Van Iren, F. and Kijne, J.W. (2000) Cryopreservation of undifferentiated plant cells. In Cryopreservation of Tropical Plant Germplasm; Current Research Progress and Applications. Edited by Engelmann, F. and Takagi, H. pp. 91-102.IPGRI, Rome
28. Sakai, A. (1960) Survival of the twig of woody plants at-196 C. Nature 185: 393-394.
29. Sakai, A., Kobayashi, S. and Oiyama, I. (1991) Cryopreservation of nucellar cells of navel orange (Citrus sinensis Osb.) by a simple freezing method. Plant Sci. 74: 243-248.
30. Stolc, V., Samanta, M.P., Tongprasit, W., Sethi, H., Liang, S., Nelson, D.C. et al. (2005) Identification of transcribed sequences in Arabidopsis thaliana by using high-resolution genome tiling arrays. Proc. Natl Acad. Sci. USA 102: 4453-4458. (Pubitemid 40397133)
31. Takahashi, S., Katagiri, T., Hirayama, T., Yamaguchi-Shinozaki, K. and Shinozaki, K. (2001) Hyperosmotic stress induced a rapid and transient increase in inositol 1,4,5-trisphosphate independent of abscisic acid in Arabidopsis cell culture. Plant Cell Physiol. 42: 214-222. (Pubitemid 32232408)
32. Uno, Y., Furihata, T., Abe, H., Yoshida, R., Shinozaki, K. and Yamaguchi-Shinozaki, K. (2000) Arabidopsis basic leucine-zipper transcription factors involved in an abscisic acid-dependent signal transduction pathway under drought and high-salinity conditions. Proc. Natl Acad. Sci. USA 97: 11632-11637.
33. Uragami, A., Sakai, A., Nagai, M. and Takahashi, T. (1989) Survival of cultured cells and somatic embryos of Asparagus officinalis cryopreserved by vitrification. Plant Cell Rep. 8: 418-421.
34. Withers, L.A. and King, P.J. (1979) Proline: a novel cryoprotectant for the freeze preservation of cultured cells of Zea mays L. Plant Physiol. 64: 675-678.
35. Withers, L.A. and King, P.J. (1980) A simple freezing unit and routine cryopreservation method for plant cell culture. CryoLetters 1: 213-220.
36. Yanai, H. (1998) 4Steps Excel Statictics. OMS publishing Inc., Tokorozawa, Saitama, Japan.