Lipid-based passivation in nanofluidics

Nano Letters

Volumn 12, Issue 5, 2012, Pages 2260-2265

  Persson, Fredrik ^a,b   Fritzsche, Joachim ^a   Mir, Kalim U ^c   Modesti, Mauro ^d   Westerlund, Fredrik ^e   Tegenfeldt, Jonas O ^a,f  

^a UNIVERSITY OF GOTHENBURG   (Sweden)

^b UPPSALA UNIVERSITY   (Sweden)

^c UNIVERSITY OF OXFORD   (United Kingdom)

^d AIX MARSEILLE UNIVERSITY   (France)

^e CHALMERS UNIVERSITY OF TECHNOLOGY   (Sweden)

^f LUND UNIVERSITY   (Sweden)

Author keywords

antifouling; lipid bilayer; Nanofluidics; passivation; protein DNA interactions; single molecules

Indexed keywords

ANTIFOULING; BOVINE SERUM; DNA CLEAVAGE; ENZYMATIC DEGRADATION; GENOMIC DNA; NANO CHANNELS; PROTEIN-DNA INTERACTIONS; RECA PROTEINS; SINGLE MOLECULE; SINGLE MOLECULE LEVEL; SYSTEMATIC STUDY; TEMPORAL RESOLUTION;

DEGRADATION; DNA; LIPID BILAYERS; MOLECULES; NANOFLUIDICS; PROTEINS;

PASSIVATION;

DNA; LIPID; QUANTUM DOT;

ARTICLE; CHEMISTRY; MICROFLUIDICS; NANOTECHNOLOGY;

DNA; LIPIDS; MICROFLUIDICS; NANOTECHNOLOGY; QUANTUM DOTS;

EID: 84861014879     PISSN: 15306984     EISSN: 15306992     Source Type: Journal    
DOI: 10.1021/nl204535h     Document Type: Article

References (25)

1. van Oijen, A. M. Cutting the forest to see a single tree? Nat. Chem. Biol. 2008, 4 (8) 440-443 (Pubitemid 352019766)
2. Persson, F.; Tegenfeldt, J. O. DNA in nanochannels-directly visualizing genomic information Chem. Soc. Rev. 2010, 39 (3) 985-999
3. Tegenfeldt, J. O.; Prinz, C.; Cao, H.; Chou, S.; Reisner, W. W.; Riehn, R.; Wang, Y. M.; Cox, E. C.; Sturm, J. C.; Silberzan, P.; Austin, R. H. The dynamics of genomic-length DNA molecules in 100-nm channels Proc. Natl. Acad. Sci. U.S.A. 2004, 101 (30) 10979-10983 (Pubitemid 38989570)
4. Riehn, R.; Lu, M. C.; Wang, Y. M.; Lim, S. F.; Cox, E. C.; Austin, R. H. Restriction mapping in nanofluidic devices Proc. Natl. Acad. Sci. U.S.A. 2005, 102 (29) 10012-10016 (Pubitemid 41023317)
5. Wang, Y. M.; Tegenfeldt, J. O.; Reisner, W.; Riehn, R.; Guan, X. J.; Guo, L.; Golding, I.; Cox, E. C.; Sturm, J.; Austin, R. H. Single-molecule studies of repressor-DNA interactions show long-range interactions Proc. Natl. Acad. Sci. U.S.A. 2005, 102 (28) 9796-9801 (Pubitemid 40993648)
6. Reisner, W.; Morton, K. J.; Riehn, R.; Wang, Y. M.; Yu, Z. N.; Rosen, M.; Sturm, J. C.; Chou, S. Y.; Frey, E.; Austin, R. H. Statics and dynamics of single DNA molecules confined in nanochannels Phys. Rev. Lett. 2005, 94 (19) 196101
7. Persson, F.; Westerlund, F.; Tegenfeldt, J. O.; Kristensen, A. Local Conformation of Confined DNA Studied Using Emission Polarization Anisotropy Small 2009, 5 (2) 190-193
8. Reisner, W.; Larsen, N. B.; Silahtaroglu, A.; Kristensen, A.; Tommerup, N.; Tegenfeldt, J. O.; Flyvbjerg, H. Single-molecule denaturation mapping of DNA in nanofluidic channels Proc. Natl. Acad. Sci. U.S.A. 2010, 107 (30) 13294-13299
9. Nyberg, L. K.; Persson, F.; Berg, J.; Bergström, J.; Fransson, E.; Olsson, L.; Persson, M.; Stålnacke, A.; Wigenius, J.; Tegenfeldt, J. O.; Westerlund, F. A single-step competitive binding assay for mapping of single DNA molecules Biochem. Biophys. Res. Commun. 2012, 417, 404-408
10. Sweryda-Krawiec, B.; Devaraj, H.; Jacob, G.; Hickman, J. J. A New Interpretation of Serum Albumin Surface Passivation Langmuir 2004, 20, 2054-2056
11. Lee, S.; Voros, J. An aqueous-based surface modification of poly(dimethylsiloxane) with poly(ethylene glycol) to prevent biofouling Langmuir 2005, 21 (25) 11957-11962 (Pubitemid 43011541)
12. Kenausis, G. L.; Voros, J.; Elbert, D. L.; Huang, N. P.; Hofer, R.; Ruiz-Taylor, L.; Textor, M.; Hubbell, J. A.; Spencer, N. D. Poly(l -lysine)-g-poly(ethylene glycol) layers on metal oxide surfaces: Attachment mechanism and effects of polymer architecture on resistance to protein adsorption J. Phys. Chem. B 2000, 104 (14) 3298-3309 (Pubitemid 33685533)
13. Alberts, B.; Johnson, A.; Lewis, J.; Raff, M.; Roberts, K.; Walter, P. Molecular Biology of the Cell, 5th ed.; Garland Science, Taylor & Francis Group, LLC: New York, 2008.
14. Nissen, J.; Gritsch, S.; Wiegand, G.; Radler, J. O. Wetting of phospholipid membranes on hydrophilic surfaces-Concepts towards self-healing membranes Eur. Phys. J. B 1999, 10 (2) 335-344 (Pubitemid 129641593)
15. Radler, J.; Strey, H.; Sackmann, E. phenomenology and kinetics of lipid bilayer spreading on hydrophilic surfaces Langmuir 1995, 11 (11) 4539-4548
16. Jonsson, P.; Beech, J. P.; Tegenfeldt, J. O.; Hook, F. Shear-Driven Motion of Supported Lipid Bilayers in Microfluidic Channels J. Am. Chem. Soc. 2009, 131 (14) 5294-5297
17. Jonsson, P.; Beech, J. P.; Tegenfeldt, J. O.; Hook, F. Mechanical Behavior of a Supported Lipid Bilayer under External Shear Forces Langmuir 2009, 25 (11) 6279-6286
18. Christensen, S. M.; Bolinger, P.-Y.; Hatzakis, N. S.; Mortensen, M. W.; Stamou, D. Mixing subattolitre volumes in a quantitative and highly parallel manner with soft matter nanofluidics Nat. Nanotechnol. 2012, 7, 51-55
19. Graneli, A.; Yeykal, C. C.; Robertson, R. B.; Greene, E. C. Long-distance lateral diffusion of human Rad51 on double-stranded DNA Proc. Natl. Acad. Sci. U.S.A. 2006, 103 (5) 1221-1226 (Pubitemid 43191146)
20. Gunnarsson, A.; Jonsson, P.; Marie, R.; Tegenfeldt, J. O.; Hook, F. Single-molecule detection and mismatch discrimination of unlabeled DNA targets Nano Lett. 2008, 8 (1) 183-188 (Pubitemid 351177798)
21. Schmidt, T.; Schütz, G. J.; Baumgartner, W.; Gruber, H. J.; Schindler, H. Imaging of single molecule diffusion Proc. Natl. Acad. Sci. U.S.A. 1996, 93 (7) 2926-2929 (Pubitemid 26114340)
22. Roca, A. I.; Cox, M. M. RecA protein: Structure, function, and role in recombinational DNA repair Proc. Natl. Acad. Sci. U.S.A. 1997, 56, 129-223
23. Kunitz, M. Crystalline desoxyrinonuclease 0.2. digestion of thymus nucleic acid (desoxyribonucleic acid)-the kinetics of the reaction J. Gen. Physiol. 1950, 33 (4) 363-377
24. Kunitz, M. Crystalline desoxyrinonuclease 0.1. isolation and general properties-spectrophotometric method for measurement of desoxyrinonuclease activity J. Gen. Physiol. 1950, 33 (4) 349-362
25. Modesti, M., Fluorescent Labeling of Proteins. In Single Molecule Analysis-Methods and Protocols; Peterman, E. J. G.; Wuite, G. J. L., Eds.; Humana Press: New York, 2011; Vol. 783, pp 101-120.