Two wheat (Triticum aestivum) pathogenesis-related 10 (PR-10) transcripts with distinct patterns of abundance in different organs

Molecular Biotechnology

Volumn 51, Issue 2, 2012, Pages 103-108

  Mohammadi, Mohsen ^a,b   Srivastava, Sanjeeva ^a,c   Hall, Jocelyn C ^a   Kav, Nat N V ^a   Deyholos, Michael K ^a  

^a UNIVERSITY OF ALBERTA   (Canada)

^b SEED AND PLANT IMPROVEMENT INSTITUTE   (Iran)

^c INDIAN INSTITUTE OF TECHNOLOGY BOMBAY   (India)

Author keywords

Differential expression; PR proteins; PR 10 genes

Indexed keywords

DIFFERENTIAL EXPRESSIONS; GENES ENCODE; INTRACELLULAR PROTEINS; PHYLOGENETIC ANALYSIS; REAL-TIME POLYMERASE CHAIN REACTION; SALINE ENVIRONMENT; SEEDLING GROWTH; STRESS TOLERANCE; TRANSGENIC EXPRESSION; TRITICUM AESTIVUM; WHEAT GENOTYPES;

POLYMERASE CHAIN REACTION;

GENE EXPRESSION;

CELL PROTEIN; PATHOGENESIS RELATED PROTEIN 10; UNCLASSIFIED DRUG; VEGETABLE PROTEIN;

ARTICLE; CEREAL; CLADISTICS; CONTROLLED STUDY; GENE DUPLICATION; GENOTYPE; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENETIC TREE; PHYLOGENY; PLANT GROWTH; PLANT LEAF; PLANT ROOT; PLANT STEM; PLANT STRESS; PROTEIN EXPRESSION; REAL TIME POLYMERASE CHAIN REACTION; TRITICUM AESTIVUM;

AMINO ACID SEQUENCE; MOLECULAR SEQUENCE DATA; ORGAN SPECIFICITY; PHYLOGENY; PLANT PROTEINS; PLANT ROOTS; REAL-TIME POLYMERASE CHAIN REACTION; SALT-TOLERANCE; SEEDLING; SEQUENCE ALIGNMENT; TRITICUM;

DICOTYLEDONEAE; TRITICUM AESTIVUM;

EID: 84860837623     PISSN: 10736085     EISSN: 15590305     Source Type: Journal    
DOI: 10.1007/s12033-011-9441-3     Document Type: Article

References (34)

1. Liu, J. J., & Ekramoddoullah, A. K. M. (2006). The family 10 of plant pathogenesis-related proteins: Their structure, regulation, and function in response to biotic and abiotic stresses. Physiological and Molecular Plant Pathology, 68, 3-13. (Pubitemid 44633583)
2. Lai, D., Hoj, P., & Fincher, G. (1993). Purification and characterization of (1?3, 1?4)-beta-gluca endohydrolases from germinated wheat (Triticum aestivum). Plant Molecular Biology, 22, 847-859.
3. Molano, J., Polacheck, I., Duran, A., & Cabib, E. (1979). Endochitinase from wheat-germ activity on nascent and preformed chitin. Journal of Biological Chemistry, 254, 4901-4907.
4. Vigers, A. J., Roberts, W. K., & Selitrennikoff, C. P. (1991). A new family of plant antifungal proteins. Molecular Plant- Microbe Interactions, 4, 315-323.
5. Bantignies, B., Seguin, J., Muzac, I., Dedaldechamp, F., Gulick, P., & Ibrahim, R. (2000). Direct evidence for ribonucleolytic activity of a PR-10-like protein from white lupin roots. Plant Molecular Biology, 42, 871-881. (Pubitemid 30399870)
6. Neudecker, P., Schweimer, K., Nerkamp, J., Scheurer, S., Vieths, S., Sticht, H., et al. (2001). Allergic cross-reactivity made visible - solution structure of the major cherry allergen Pru av 1. Journal of Biological Chemistry, 276, 22756-22763.
7. Fujimoto, Y., Nagata, R., Fukasawa, H., Yano, K., Azuma, M., Iida, A., et al. (1998). Purification and cDNA cloning of cytokinin- specific binding protein from mung bean (Vigna radiata). European Journal of Biochemistry, 258, 794-802. (Pubitemid 28557948)
8. Moiseyev, G. P., Fedoreyeva, L. I., Zhuravlev, Y. N., Yasnetskaya, E., Jekel, P. A., & Beintema, J. J. (1997). Primary structures of two ribonucleases from ginseng calluses - new members of the PR-10 family of intracellular pathogenesis-related plant proteins. FEBS Letters, 407, 207-210. (Pubitemid 27199493)
9. Jwa, N. S., Agrawal, G. K., Rakwal, R., Park, C. H., & Agrawal, V. P. (2001). Molecular cloning and characterization of a novel jasmonate inducible pathogenesis-related class 10 protein gene, JIOsPR-10, from rice (Oryza sativa L.) seedling leaves. Biochemical and Biophysical Research Communications, 286, 973-983. (Pubitemid 32924868)
10. Persson, M., Falk, A., & Dixelius, C. (2009). Studies on the mechanism of resistance to Bipolaris sorokiniana in the barley lesion mimic mutant bst1. Molecular Plant Pathology, 10, 587-598.
11. Richard-Molard, C., Brugiere, N., Moille, M., Carrayol, E., & Limami, A. M. (2004). Molecular characterization of a gene encoding a vegetative storage protein (CiVSP) from Cichorium intybus and its expression in the root and shoot in relation to nitrogen status and pathogen resistance. Physiologia Plantarum, 121, 568-577. (Pubitemid 39123190)
12. Park, C. J., Kim, K. J., Shin, R., Park, J. M., Shin, Y. C., & Paek, K. H. (2004). Pathogenesis-related protein 10 isolated from hot pepper functions as a ribonuclease in an antiviral pathway. Plant Journal, 37, 186-198. (Pubitemid 38106604)
13. Broderick, K., Pittock, C., Arioli, T., Creaser, E. H., Weinman, J. J., & Rolfe, B. G. (1997). Pathogenesis-related proteins in Trifolium subterraneum: A general survey and subsequent characterisation of a protein inducible by ethephon and redlegged earth mite attack. Australian Journal of Plant Physiology, 24, 819-829.
14. Moons, A., Prinsen, E., Bauw, G., & van Montagua, M. (1997). Antagonistic effects of abscisic acid and jasmonates on salt stress-inducible transcripts in rice roots. Plant Cell, 9, 2243-2259.
15. Hashimoto, M., Kisseleva, L., Sawa, S., Furukawa, T., Komatsu, S., & Koshiba, T. (2004). A novel rice PR-10 protein, RSOsPR- 10, specifically induced in roots by biotic and abiotic stresses, possibly via the jasmonic acid signaling pathway. Plant and Cell Physiology, 45, 550-559. (Pubitemid 38791238)
16. Kav, N. N. V., Srivastava, S., Goonewardene, L., & Blade, S. F. (2004). Proteome-level changes in the roots of Pisum sativum in response to salinity. Annals of Applied Biology, 145, 217-230. (Pubitemid 41694624)
17. Koistinen, K. M., Hassinen, V. H., Gynther, P. A. M., Lehesranta, S. J., Keinanen, S. I., Kokko, H. I., et al. (2002). Birch PR-10c is induced by factors causing oxidative stress but appears not to confer tolerance to these agents. New Phytologist, 155, 381-391. (Pubitemid 34923132)
18. McGhee, J. D., Hamer, J. E., & Hodges, T. K. (2001). Characterization of a PR-10 pathogenesis-related gene family induced in rice during infection with Magnaporthe grisea. Molecular Plant- Microbe Interactions, 14, 877-886. (Pubitemid 32575665)
19. Dunfield, K., Srivastava, S., Shah, S., & Kav, N. N. V. (2007). Constitutive expression of ABR17 cDNA enhances germination and promotes early flowering in Brassica napus. Plant Science, 173, 521-553.
20. Chen, Z. Y., Brown, R. L., Kenneth, E., Damann, K. E., & Cleaveland, T. E. (2010). PR10 expression in maize and its effect on host resistance against Aspergillus flavus infection and aflatoxin production. Molecular Plant Pathology, 11, 69-81.
21. Zubini, P., Zambelli, B., Musiani, F., Ciurli, S., Bertolini, P., & Baraldi, E. (2009). The RNA hydrolysis and the cytokinin binding activities of PR-10 proteins are differently performed by two isoforms of the Pru p 1 PeachMajor allergen and are possibly functionally related. Plant Physiology, 150, 1235-1247.
22. Zadoks, J. C., Chang, T. T., & Konzak, C. F. (1974). Decimal code for growth stages of cereals. Weed Research, 14, 415-421.
23. Moore, S., Payton, P., Wright, M., Tanksley, S., & Giovannoni, J. (2005). Utilization of tomato microarrays for comparative gene expression analysis in the Solanaceae. Journal of Experimental Botany, 56, 2885-2895. (Pubitemid 41507225)
24. Mohammadi, M., Kav, N. N. V., & Deyholos, M. K. (2007). Transcriptional profiling of hexaploid wheat (Triticum aestivum L.) roots identifies novel, dehydration-responsive genes. Plant Cell and Environment, 30, 630-645. (Pubitemid 46537706)
25. Vandesompele, J., Preter, K. D., Pattyn, F., Poppe, B., Roy, N. V., Paepe, A. D., et al. (2002). Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biology, 3, 0034.
26. Pfaffl, M. W. (2001). A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Research, 29, 2002-2007.
27. Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J. H., Zhang, Z., Miller, W., et al. (1997). Gapped BLAST and PSIBLAST: A new generation of protein database search programs. Nucleic Acids Research, 25, 3389-3402. (Pubitemid 27359211)
28. Lee, B., Hong, T., Byun, S. J., Woo, T., & Choi, Y. J. (2007). ESTpass: A web-based server for processing and annotating expressed sequence tag (EST) sequences. Nucleic Acids Research, 35, W159-W162.
29. Iseli, C., Jongeneel, C. V., & Bucher, P. (1999). ESTScan: A program for detecting, evaluating, and reconstructing potential coding regions in EST sequences. In Proceedings of International Conference on Intelligent Systems for Molecular Biology (pp. 138-148).
30. Okubo, K., Hori, N., Matoba, R., Niiyama, T., Fukushima, A., Kojima, Y., et al. (1992). Large-scale cDNA sequencing for analysis of quantitative and qualitative aspects of gene-expression. Nature Genetics, 2, 173-179.
31. Chao, S., Lazo, G. R., You, F., Crossman, C. C., Hummel, D. D., Lui, N., et al. (2006). Use of a large-scale Triticeae expressed sequence tag resource to reveal gene expression profiles in hexaploid wheat (Triticum aestivum L.). Genome, 49, 531-544. (Pubitemid 44284777)
32. Akhunov, E. D., Goodyear, A. W., Geng, S., Qi, L. L., Echalier, B., Gill, B. S., et al. (2003). The organization and rate of evolution of wheat genomes are correlated with recombination rates along chromosome arms. Genome Research, 13, 753-763. (Pubitemid 36621735)
33. Wilhelm, K. S., & Thomashow, M. F. (1993). Arabidopsis thaliana Cor15b, an apparent homolog of Cor15a, is strongly responsive to cold and Aba, but not drought. Plant Molecular Biology, 23, 1073-1077. (Pubitemid 2027569)
34. Yamaguchi-Shinozaki, K., & Shinozaki, K. (1993). Characterization of the expression of a desiccation-responsive Rd29 gene of Arabidopsis thaliana and analysis of its promoter in transgenic plants. Molecular and General Genetics, 236, 331-340. (Pubitemid 23055573)